多组学技术及其在生命科学研究中应用概述

随着新一代测序技术、高分辨质谱技术、多组学整合分析方法及数据库的发展,组学技术正从传统的单一组学向多组学技术发展。以多组学驱动的系统生物学研究将带来生命科学研究的新范式。本文简要概述了基因组学、表观基因组学、转录组学,蛋白质组学及代谢组学的进展,重点介绍多组学技术平台的组成和功能,多组学技术的应用现状及在合成生物学及生物医学等领域的应用前景。     

Semi-synthetic nucleic acid-protein conjugates: applications in life sciences and nanobiotechnology

Semi-synthetic conjugates of nucleic acids and proteins can be generated by either covalent coupling chemistry, or else by non-covalent biomolecular recognition systems, such as receptor-ligands of complementary nucleic acids. These nucleic acid-protein conjugates are versatile molecular tools which can be applied, for instance, in the self-assembly of high-affinity reagents for immunological detection assays, the fabrication of laterally microstructured biochips containing functional biological groups, and the biomimetic 'bottom-up' synthesis of nanostructured supramolecular devices. This review summarizes the current state-of-the-art synthesis and characterization methods of artificial nucleic acid-protein conjugates, as well as applications and perspectives for future developments of such hybrid biomolecular components in life sciences and nanobiotechnology.     

Applications of low-light imaging to life sciences

Photon imaging is a new technique for the quantitative analysis of bioluminescence and chemiluminescence and can be performed both at the macro and micro levels. The high sensitivity and spatial resolution of photon-counting cameras have resulted in the development of new applications in the life sciences. At the macro level, imaging is a valuable tool for the rapid identification of biological samples emitting long-lasting glows in assays using microtitre plates or filter formats (immunoassays, DNA probes, phagocytosis, gene expression, metabolite and drug analysis) and also for in vivo studies of promoter activity. At the micro level, low-light imaging can be used for analysing multiple analytes on micro sensors and for advanced cell analysis (immunocytology, in situ hybridization, identification of cells or tissues expressing the luciferase gene, intracellular or intercellular protein traffic, metabolite analysis and imaging of Ca²⁺ flux and phosphorylation reactions). Two-dimensional photon-counting instrumentation is a versatile and powerful research tool for imaging and is complementary to conventional luminometers. The main applications to the life sciences involve many types of luminescence assays and can be performed on multiple samples in standard and non-standard formats. Photon-counting coupled to imaging is very helpful in selecting microorganisms or cells expressing bioluminescent genes. Measurements can be made in vitro and in vivo with a sensitivity comparable to that of phototube luminometers.     

基因组研究与生命科学工业的崛起

人类基因组的全序列测定预计可提前两年于２００３年完成，特别是基因组内的蛋白质编码序列将更早测定。私人财团斥巨资进入这个领域，并望抢得先手，这意味着基因组研究可创造巨大财富。在过去几年里，国际上一批知名的大型制药集团和化学工业公司已在基因组研究领域内投入大量资金，并形成了一个新的产业部门，即生命科学工业。制药工业是生命科学工业的主要支柱之一，与基因组研究的关系特别密切。药物基因组学研究表明，药物的疗效与患者的基因型相关，因此，今后的药物生产要考虑到药物投放地区人群中有关的等位基因的频率，医疗处方也将因人而异而趋向个人化。比较基因组学研究则有助于从模式生物的资料指出与疾病可能相关的基因，可以此作为靶标来设计药物。     

Laser microprobe mass analysis: a review of applications in the life sciences

The characteristics and analytical utility of laser microprobe mass analysis (LAMMA) are described and evaluated, and a short history of this recent microanalytical technique is presented. A review of the areas of application of LAMMA and related laser microprobes is presented with special emphasis on applications in the life sciences.     

Recognizing and optimizing flight opportunities with hardware and life sciences limitations

The availability of orbital space flight opportunities to conduct life sciences research has been limited. It is possible to use parabolic flight and sounding rocket programs to conduct some kinds of experiments during short episodes (seconds to minutes) of reduced gravity, but there are constraints and limitations to these programs. Orbital flight opportunities are major undertakings, and the potential science achievable is often a function of the flight hardware available. A variety of generic types of flight hardware have been developed and tested, and show great promise for use during NSTS flights. One such payload configuration is described which has already flown.     

Online tools to support literature-based discovery in the life sciences

In biomedical research, the amount of experimental data and published scientific information is overwhelming and ever increasing, which may inhibit rather than stimulate scientific progress. Not only are text-mining and information extraction tools needed to render the biomedical literature accessible but the results of these tools can also assist researchers in the formulation and evaluation of novel hypotheses. This requires an additional set of technological approaches that are defined here as literature-based discovery (LBD) tools. Recently, several LBD tools have been developed for this purpose and a few well-motivated, specific and directly testable hypotheses have been published, some of which have even been validated experimentally. This paper presents an overview of recent LBD research and discusses methodology, results and online tools that are available to the scientific community.     

Advanced short-lived nuclide NAA with application in the life sciences

Biological Trace Element Research - A new technique for short-lived nuclide activation analysis has been developed that compensates the rapid radioactive decay during the counting period by...     

Laser tweezers and multiphoton microscopes in life sciences

Near infrared (NIR) laser microscopy enables optical micromanipulation, piconewton force determination, and sensitive fluorescence studies by laser tweezers. Otherwise, fluorescence images with high spatial and temporal resolution of living cells and tissues can be obtained via non-resonant fluorophore excitation with multiphoton NIR laser scanning microscopes. Furthermore, NIR femtosecond laser pulses at TW/cm2 intensities can be used to realize non-invasive contact-free surgery of nanometer-sized structures within living cells and tissues. Applications of these novel versatile NIR laser-based tools for the determination of motility forces, coenzyme and chlorophyll imaging, three-dimensional multigene detection, non-invasive optical sectioning of tissues ("optical biopsy"), functional protein imaging, and nanosurgery of chromosomes are described.