Periodicity of the growth-band formation in vertebrae of juvenile scalloped hammerhead shark Sphyrna lewini from the Mexican Pacific Ocean

The age of 296 juvenile scalloped hammerhead sharks Sphyrna lewini caught by several fisheries in the Mexican Pacific Ocean from March 2007 to September 2017 were estimated from growth band counts in thin-sectioned vertebrae. Marginal-increment analysis (MIA) and centrum-edge analysis (CEA) were used to verify the periodicity of formation of the growth bands, whereas elemental profiles obtained from LA-ICP-MS transect scans in vertebrae of 15 juveniles were used as an alternative approach to verify the age of the species for the first time. Age estimates ranged from 0 to 10+ years (42–158.7 cm total length; L_T). The index of average percentage error (I_APE 3.6%), CV (5.2%), bias plots and Bowker's tests of symmetry showed precise and low-biased age estimation. Both MIA and CEA indicated that in the vertebrae of juveniles of S. lewini a single translucent growth band was formed during winter (November–March) and an opaque band during summer (July–September), a period of faster growth, apparently correlated with a higher sea surface temperature. Peaks in vertebral P and Mn content spatially corresponded with the annual banding pattern in most of the samples, displaying 1.19 and 0.88 peaks per opaque band, respectively, which closely matched the annual deposition rate observed in this study. Although the periodicity of growth band formation needs to be verified for all sizes and ages representing the population of the species in the region, this demonstration of the annual formation of the growth bands in the vertebrae of juveniles should lead to a re-estimation of the growth parameters and productivity of the population to ensure that it is harvested at sustainable levels.     

Elemental signatures in the vertebral cartilage of the round stingray, Urobatis halleri, from Seal Beach, California

Although numerous studies have utilized elemental analysis techniques for age determination in bony fishes, little work has been conducted utilizing these procedures to verify age assessments or temporal periodicity of growth band formation in elasmobranchs. The goal of this study was to determine the potential of laser ablation inductively coupled plasma-mass spectrometry (LA-ICP-MS) to provide information on the seasonal deposition of elements in the vertebrae of the round stingray collected from Seal Beach, California. Spatially resolved time scans for elements across the round stingray vertebrae showed peaks in calcium intensity that aligned with and corresponded to the number of seasonal growth bands identified using standard light microscopy. Higher signals of calcium were associated with the wide opaque bands while lower signals of calcium corresponded to the narrow translucent bands. While a close alignment between the numbers of calcium peaks and annual growth bands was observed in round stingray samples aged 5 years or younger, this relationship was less well defined in vertebral samples from round stingrays over 11 years old. To the best of our knowledge, this is the first study of its kind to utilize ICP-MS to verify age assessments and seasonal band formation in an elasmobranch. The results from this preliminary study indicate that LA-ICP-MS elemental analysis of the vertebral cartilage of the round stingray may have potential to independently verify optically derived age assessments and seasonal banding patterns in elasmobranch vertebrae.     

Age and growth of the tropical oviparous shark,Chiloscyllium punctatum in Indonesian waters

The brown-banded bamboo shark, Chiloscyllium punctatum, is the most common shark caught in coastal commercial fisheries throughout Southeast Asia, yet there is a lack of the life-history information necessary for reliable stock assessments. The authors estimated growth rates and age at maturity using analysis of growth bands in vertebral centra. They trialled four different techniques to enhance the visibility and improve identification of the putative annual growth bands necessary for age estimation. The authors found that the burn method on whole vertebral centra provided the most readable and consistent results for age analysis. The logistic model was chosen as the best-fit growth model for age estimation of 330 individual C. punctatum from Indonesia. Several age verification methods, including marginal increment ratio and length-frequency analysis, were performed with the support of age validation through the use of calcein-labelled vertebrae from two sharks maintained in captivity. This study found that C. punctatum from Indonesian waters is a fast-growing species that can grow up to 18 cm year⁻¹, reach an estimated maximum total length of 1 m, mature at c. 6.5 years and live for up to 14 years.     

An analysis of the feasibility of using caudal vertebrae for ageing the spinetail devilray, Mobula japanica (Müller and Henle, 1841)

Age assessment of Mobula japanica may be possible using the caudal vertebrae, below the origin of the dorsal fin. This is supported by the significant linear relationship found between disc width (DW) and centrum radius (CR, n?=?55), the continuous record of growth bands in the vertebrae, the clarity to distinguish and count growth bands, and the precision of the band counts. Assuming an annual band formation, the preliminary assessment of the age suggests that M. japanica lives at least 14 years and has a low growth rate (K?=?0.28 year^?1). The minimum number of growth bands was one for spinetail devilrays with a 1,210–1,390 mm DW, while the maximum was 14 for a 2,300 mm DW devilray. While age validation is still required, results indicate the feasibility of the use of caudal vertebrae for age estimation. To provide robust estimates of validated age and growth for the spinetail devilray, the sampling coverage needed might imply an international cooperation.     

An assessment of otoliths,dorsal spines and scales to age the long‐finned gurnard,Lepidotrigla argus,Ogilby, 1910 (Family: Triglidae)

Sagittal otoliths, dorsal spines and scales were critically assessed as structures to potentially determine the age of the long‐finned gurnard, Lepidotrigla argus. Counts were made of opaque growth increments and a readability score was assigned to each structure. Comparisons of growth increment counts were made between structures and between readings. All three structures showed some degree of readability and quantifiable growth increments, but this varied within fishes and between structures. Initial results showed that whole otoliths were more suitable to determine age estimates than dorsal spines and scales. Scales were considered unsuitable due to between reading ageing bias, variation in age estimates between structures, low precision and poor readability for this species. Dorsal spines showed evidence of loss of growth increments due to hollowing of the vascular core, which resulted in underestimation of older individuals in comparison to whole otoliths. Further analysis showed that growth increment counts from whole otoliths were lower for older individuals in comparison to sectioned otoliths. It is suggested that this is because of decreased clarity of growth increments towards the outer margin of whole otoliths in older individuals; this problem was not present with sectioned otoliths. It was concluded that sectioned otoliths were a more suitable structure from which to estimate age of L. argus than were whole otoliths, dorsal spines and/or scales.     

Comparison of otolith and scale readings for age and growth estimation of common dentex Dentex dentex

Three methods of age estimation were compared for Dentex dentex. Based on sectioned otoliths, scales appeared to be relevant only up to 5 years and whole otoliths up to 12 years. The maximum estimated age was 36 years, which constitutes to date the oldest age reported.     

A comparison of different structures and methods for estimating age of northern-form Dolly Varden <Emphasis Type="Italic">Salvelinus malma malma</Emphasis> from the Canadian Arctic

Assessment of anadromous northern-form Dolly Varden Salvelinus malma malma in the Western Canadian Arctic requires reliable methods for estimating ages. Additionally, conservation efforts warrant determining whether fin rays provide a non-lethal alternative to otoliths. Precision and bias of whole and sectioned otoliths, and sectioned pectoral and pelvic fin rays were examined. Two age readers with different levels of experience ageing this species read each structure three times. Coefficient of variation (CV) was calculated to measure precision, and age bias plots were created for each method of preparation/structure within and between readers. The experienced reader demonstrated the highest precision with sectioned otoliths (CV = 1.6 %) followed by whole otoliths (CV = 4.2 %) while pectoral and pelvic fins were the lowest, CV = 7.7 % and 7.5 %, respectively. The age bias plot showed little difference between whole and sectioned otoliths, although greater imprecision/bias was evident for whole otoliths at age ≥9. Compared to otoliths, fin rays produced younger age estimates starting at 5 years; however, pelvic fins were more biased towards younger estimates than pectoral fins. The less experienced reader had greater inconsistencies, tending to overage younger and underage older samples for all methods compared to the more experienced reader, underscoring the importance of experience when estimating age for this species. We conclude that both types of fin rays are a poor non-lethal alternative to otoliths for fish ≥5 years and recommend an experienced ager could use whole otoliths up to age 8 and sectioned otoliths for fish ≥9 years (>500 mm fork length).     

Phenotypic integration of the cervical vertebrae in the Hominoidea (Primates)

Phenotypic integration and modularity represent important factors influencing evolutionary change. The mammalian cervical vertebral column is particularly interesting in regards to integration and modularity because it is highly constrained to seven elements, despite widely variable morphology. Previous research has found a common pattern of integration among quadrupedal mammals, but integration patterns also evolve in response to locomotor selective pressures like those associated with hominin bipedalism. Here, I test patterns of covariation in the cervical vertebrae of three hominoid primates (Hylobates, Pan, Homo) who engage in upright postures and locomotion. Patterns of integration in the hominoid cervical vertebrae correspond generally to those previously found in other mammals, suggesting that integration in this region is highly conserved, even among taxa that engage in novel positional behaviors. These integration patterns reflect underlying developmental as well as functional modules. The strong integration between vertebrae suggests that the functional morphology of the cervical vertebral column should be considered as a whole, rather than in individual vertebrae. Taxa that display highly derived morphologies in the cervical vertebrae are likely exploiting these integration patterns, rather than reorganizing them. Future work on vertebrates without cervical vertebral number constraints will further clarify the evolution of integration in this region.     

Age and Growth of Endangered Smalltooth Sawfish (Pristis pectinata) Verified with LA-ICP-MS Analysis of Vertebrae

Endangered smalltooth sawfish (Pristis pectinata) were opportunistically sampled in south Florida and aged by counting opaque bands in sectioned vertebrae (n = 15). Small sample size precluded traditional age verification, but fish collected in spring and summer had translucent vertebrae margins, while fish collected in winter had opaque margins. Trends in Sr:Ca measured across vertebrae with laser ablation-inductively coupled plasma-mass spectrometry corresponded well to annual salinity trends observed in sawfish estuarine nursery habitats in south Florida, thus serve as a chemical marker verifying annual formation of opaque bands. Based on that finding and assumptions about mean birth date and timing of opaque band formation, estimated age ranged from 0.4 y for a 0.60 m total length (TL) male to 14.0 y for a 4.35 m TL female. Von Bertalanffy growth parameters computed from size at age data were 4.48 m for L_∞, 0.219 y⁻¹for k, and −0.81 y for t₀. Results of this study have important implications for sawfish conservation as well as for inferring habitat residency of euryhaline elasmobranchs via chemical analysis of vertebrae.     

PEROXIDASE ISOZYMES: A MEASURE OF MOLECULAR VARIATION IN TEN HERBACEOUS SPECIES OF DATURA

Leaf proteins of the 10 herbaceous species of the genus Datura were separated by electrophoresis in starch gels and stained to reveal peroxidases. A. total of 19 different sites of peroxidase bands was observed for the species as a whole. Developmental studies showed that the number of bands increased with age of the leaf during seedling growth as well as in more mature plants. Among species the number of band sites for one particular leaf (AL-4) varied from 4 to 9. Each species pattern was unique, and no single peroxidase band was common to all the species. Based on considerations of interspecific cross compatibility and chromosomal rearrangements the c assical taxonomic division of the genus into three sections was further subdivided to give five groups. The degree of phylogenetic relationship for species within vs. between these groups was assessed for the peroxidase patterns by use of statistical methods based on a hypergeometric distribution model. The probability that the observed degree of band matching was due to chance was less among species within a group than between groups, thus indicating a closer genetic association which is in agreement with the relationships arrived at by more conventional methods.     

Age estimates derived from hard parts of swordfish Xiphias gladius from the north-western Mediterranean Sea

Accurate age estimates for fish are critical for properly understanding stock dynamics and health; this is particularly true for larger billfishes. Here we determined the most accurate aging estimation methods for swordfish (Xiphias gladius). We compared age estimates obtained from fin-ray sections, otolith sections, whole otoliths, and vertebrae collected from 87 swordfish off the east coast of Corsica. Age estimates from otolith sections were most consistently estimated across different readers (lowest average percentage error), followed by fin-ray sections, third vertebrae, and whole otoliths. When the age estimates from the otolith sections were compared with the other three age sclerochronological methods, we found the average percentage error to be lowest between the otolith section and fin-ray methods. However, age estimates from fin rays proved most useful for estimating swordfish younger than 6 years, as the fin ray-based age diverged from that of the otolith sections as the swordfish aged. Combining fin ray and otolith section techniques, we estimated the growth parameters of 1–12-year-old females (L_∞ = 259.412, k = 0.113, t₀ = −2.499) and 1–7-year-old males (L_∞ = 175.543, k = 0.202, t₀ = −2.239). We found that females grew significantly faster than males after 3 years and remained larger thereafter. Our calculated growth rates for this region of the north-western Mediterranean Sea were lower than those of the Atlantic, Pacific, and eastern Mediterranean Sea swordfish populations, and similar to growth rates recorded for the western Mediterranean Sea populations. Our study provides critical knowledge on biological-related parameters to serve as a guide for preserving the swordfish population in the Mediterranean Sea.     

How old are you—Evaluation of age reading methods for the invasive round goby (Neogobius melanostomus,Pallas 1814)

In the Baltic, the first observation of the round goby (Neogobius melanostomus, Pallas 1814) was made in 1990. Within the past decade the species became invasive and spread rapidly throughout the Baltic Sea. Studies about the fishes potential impacts on resident species promote the need for an increasing knowledge of their basic stock structures such as growth rates, longevity and mortality, which all rely on accurate estimates of age. Former studies on the round goby have used several different age reading techniques. In this study, we compared three standard otolith preparation methods for ageing and present the best procedure for the invasive round goby. The results showed significant differences in age estimates of the same fish between the different preparation methods and between readers. The estimation of the first annulus, the first year, was the most problematic. The overall agreement was lowest when reading the whole otoliths while the best performance was achieved with sectioned and stained preparation method. Depending on method used the growth estimates also differed. The results question comparability between previous studies and highlight the importance of harmonised aging procedures for the round goby for obtaining correct estimates of population parameters such as growth rate, age at maturity, and longevity.     

Homoplasy corrected estimation of genetic similarity from AFLP bands,and the effect of the number of bands on the precision of estimation

AFLP is a DNA fingerprinting technique, resulting in binary band presence–absence patterns, called profiles, with known or unknown band positions. We model AFLP as a sampling procedure of fragments, with lengths sampled from a distribution. Bands represent fragments of specific lengths. We focus on estimation of pairwise genetic similarity, defined as average fraction of common fragments, by AFLP. Usual estimators are Dice (D) or Jaccard coefficients. D overestimates genetic similarity, since identical bands in profile pairs may correspond to different fragments (homoplasy). Another complicating factor is the occurrence of different fragments of equal length within a profile, appearing as a single band, which we call collision. The bias of D increases with larger numbers of bands, and lower genetic similarity. We propose two homoplasy- and collision-corrected estimators of genetic similarity. The first is a modification of D, replacing band counts by estimated fragment counts. The second is a maximum likelihood estimator, only applicable if band positions are available. Properties of the estimators are studied by simulation. Standard errors and confidence intervals for the first are obtained by bootstrapping, and for the second by likelihood theory. The estimators are nearly unbiased, and have for most practical cases smaller standard error than D. The likelihood-based estimator generally gives the highest precision. The relationship between fragment counts and precision is studied using simulation. The usual range of band counts (50–100) appears nearly optimal. The methodology is illustrated using data from a phylogenetic study on lettuce.     

联合GF-6和Sentinel-2红边波段的森林地上生物量反演

光谱反射率能反映地物差异,是森林地上生物量（Aboveground Biomass,AGB）遥感反演的理论基础。红边波段处于近红外与红光波段交界处快速变化的区域,能对植被冠层结构和叶绿素含量的微小变化做出快速反应,对植被生长状况较敏感。研究以GF-6和Sentinel-2多光谱影像作为数据源,结合野外调查AGB数据,构建落叶松和樟子松AGB线性和非线性估测模型,通过比较模型精度选择最优模型进行森林AGB反演和空间分布制图。结果表明：GF-6和Sentinel-2影像红边波段反射率与落叶松、樟子松AGB均呈显著相关（P<0.05）,红边波段对AGB估测较敏感。多变量估测模型整体估测效果优于单变量模型,所有模型中多元线性回归模型取得了最优的决定系数（落叶松R²=0.66,樟子松R²=0.65）和最低的均方根误差（落叶松RMSE=31.45 t/hm²,樟子松RMSE=54.77 t/hm²）。相比单个数据源,联合GF-6和Sentinel-2影像构建的多元线性回归模型估测效果得到了显著提升,模型RMSE对于落叶松和樟子松AGB估测分别最大降低了22.9%和11.2%。增加红边波段进行AGB估测能显著提高模型估测精度,三组数据源分别加入红边波段信息后进行建模,模型RMSE得到了显著降低。GF-6拥有800 km观测幅宽和高效的重访周期,可以快速地提供大尺度时间序列数据,在森林地上生物量反演和动态监测方面有着很大潜力。     

Growth-band counts from elephantfish Callorhinchus milii fin spines do not correspond with independently estimated ages

Fin spines from elephantfish Callorhinchus milii were sectioned and viewed with transmitted white light under a compound microscope. The sections displayed growth bands but their interpretation and significance were unclear. Three different methods were used for counting growth bands. The results were compared with reference growth curves based on length-at-age estimates for six juvenile year classes derived from length-frequency distributions, and tagging data that showed longevity is at least 20 years. None of the three ageing methods showed good correspondence with the reference curves and all methods departed markedly from the reference curves at ages above 2 years old. Therefore, growth bands present in C. milii spines are not useful for ageing, at least with the three methods tested here. Spine bands may not represent age marks, but instead may be layers of material deposited irregularly to strengthen the spine.     

Investigations of Δ 14C, δ 13C, and δ 15N in vertebrae of white shark (Carcharodon carcharias) from the eastern North Pacific Ocean

The white shark, Carcharodon carcharias, has a complex life history that is characterized by large scale movements and a highly variable diet. Estimates of age and growth for the white shark from the eastern North Pacific Ocean indicate they have a slow growth rate and a relatively high longevity. Age, growth, and longevity estimates useful for stock assessment and fishery models, however, require some form of validation. By counting vertebral growth band pairs, ages can be estimated, but because not all sharks deposit annual growth bands and many are not easily discernable, it is necessary to validate growth band periodicity with an independent method. Radiocarbon (¹⁴C) age validation uses the discrete ¹⁴C signal produced from thermonuclear testing in the 1950s and 1960s that is retained in skeletal structures as a time-specific marker. Growth band pairs in vertebrae, estimated as annual and spanning the 1930s to 1990s, were analyzed for Δ¹⁴C and stable carbon and nitrogen isotopes (δ¹³C and δ¹⁵N). The aim of this study was to evaluate the utility of ¹⁴C age validation for a wide-ranging species with a complex life history and to use stable isotope measurements in vertebrae as a means of resolving complexity introduced into the ¹⁴C chronology by ontogenetic shifts in diet and habitat. Stable isotopes provided useful trophic position information; however, validation of age estimates was confounded by what may have been some combination of the dietary source of carbon to the vertebrae, large-scale movement patterns, and steep ¹⁴C gradients with depth in the eastern North Pacific Ocean.     

Incorporation time of oxytetracycline into calcified structures of the elasmobranch Heterodontus portusjacksoni

The time taken for oxytetracycline to be incorporated as an intense, discrete band was determined by examining vertebrae and dorsal fin spines of Heterodontus portusjacksoni that were injected with oxytetracycline 2–180 days post-treatment. Oxytetracycline was visible in dorsal fin spines 2 days after treatment and 3 days after treatment in sectioned vertebrae. A distinct mark could not be identified in unsectioned vertebrae.     

Age and growth of the tiger shark Galeocerdo cuvier off the east coast of Australia

Total lengths (L_T) at age and growth rates for south‐west Pacific Galeocerdo cuvier were estimated from vertebral growth‐band counts of 202 sagitally sectioned centra from 112 females (71–430 cm L_T), 79 males (72–351 cm L_T) and 11 of unknown sex. Captive growth data were also examined to complement vertebral age estimations. The sexes combined modelled growth coefficient (k = 0·08) was smaller than previously reported for G. cuvier populations elsewhere. Split‐band and narrow banding patterns were identified as potential sources of age underestimation in this species.     

Genetic stability, <Emphasis Type="Italic">ex vitro</Emphasis> rooting and gene expression studies in <Emphasis Type="Italic">Hagenia abyssinica</Emphasis>

Randomly amplified polymorphic DNA (RAPD) markers were used to assess genetic stability of 80 micropropagated Hagenia abyssinica plants, 40 of axillary origin and 40 of adventitious origin. The shoots were isolated from the same mother tree and micropropagated for over two years. Among the 83 RAPD primers screened, 16 gave reproducible band patterns. These 16 primers produced 115 bands for each plant. One plant from axillary origin showed two unique bands with primer OPC-11. All other plants showed identical band patterns. Generally, there was no significant difference in the shoot multiplication rate between shoots of axillary and adventitious origin. Indole-3-acetic acid (IAA) resulted in better ex vitro rooting compared to indole-3-butyric acid (IBA) and α-naphthaleneacetic acid (NAA). Non-micropropagated plants that were grown in the greenhouse for about one year were better in ex vitro rooting compared to those of juvenile material and mature tree derived micropropagated plants of the same treatment. Adventitious rooting related oxygenase gene (ARRO-1) isolated from apple (Malus domestica) was not expressed in H. abyssinica using a complementary DNA representational difference analysis fragment (cDNA RDA14) as a probe.