Differential effects of chronic and acute simulated seawater intrusion on tidal freshwater marsh carbon cycling

Tidal freshwater ecosystems experience acute seawater intrusion associated with periodic droughts, but are expected to become chronically salinized as sea level rises. Here we report the results from an experimental manipulation in a tidal freshwater Zizaniopsis miliacea marsh on the Altamaha River, GA where diluted seawater was added to replicate marsh plots on either a press (constant) or pulse (2 months per year) basis. We measured changes in porewater chemistry (SO₄^2?, Cl^?, organic C, inorganic nitrogen and phosphorus), ecosystem CO₂ and CH₄ exchange, and microbial extracellular enzyme activity. We found that press (chronic) seawater additions increased porewater chloride and sulfate almost immediately, and ammonium and phosphate after 2–4 months. Chronic increases in salinity also decreased net ecosystem exchange, resulting in reduced CO₂ and CH₄ emissions from press plots. Our pulse treatment, designed to mimic natural salinity incursion in the Altamaha River (September and October), temporarily increased porewater ammonium concentrations but had few lasting effects on porewater chemistry or ecosystem carbon balance. Our findings suggest that long-term, chronic saltwater intrusion will lead to reduced C fixation and the potential for increased nutrient (N, P) export while acute pulses of saltwater will have temporary effects.     

Biogeochemical effects of simulated sea level rise on carbon loss in an Everglades mangrove peat soil

Saltwater intrusion and inundation can affect soil microbial activity, which regulates the carbon (C) balance in mangroves and helps to determine if these coastal forests can keep pace with sea level rise (SLR). This study evaluated the effects of increased salinity (+15 ppt), increased inundation (?8 cm), and their combination, on soil organic C loss from a mangrove peat soil (Everglades, Florida, USA) under simulated tides. Soil respiration (CO₂ flux), methane (CH₄) flux, dissolved organic carbon (DOC) production, and porewater nutrient concentrations were quantified. Soil respiration was the major pathway of soil organic C loss (94–98%) and was approximately 90% higher in the control water level than the inundated treatment under elevated salinity. Respiration rate increased with water temperature, but depended upon salinity and tidal range. CH₄ flux was minimal, while porewater DOC increased with a concomitant, significant decline in soil bulk density under increased inundation. Porewater ammonium increased (73%) with inundation and soluble reactive phosphorus increased (32%) with salinity. Overall, the decline in soil organic C mineralization from combined saltwater intrusion and prolonged inundation was not significant, but results suggest SLR could increase this soil’s susceptibility to peat collapse and accelerate nutrient and DOC export to adjacent Florida Bay.     

Drought‐induced saltwater incursion leads to increased wetland nitrogen export

Coastal wetlands have the capacity to retain and denitrify large quantities of reactive nitrogen (N), making them important in attenuating increased anthropogenic N flux to coastal ecosystems. The ability of coastal wetlands to retain and transform N is being reduced by wetland losses resulting from land development. Nitrogen retention in coastal wetlands is further threatened by the increasing frequency and spatial extent of saltwater inundation in historically freshwater ecosystems, due to the combined effects of dredging, declining river discharge to coastal areas due to human water use, increased drought frequency, and accelerating sea‐level rise. Because saltwater incursion may affect N cycling through multiple mechanisms, the impacts of salinization on coastal freshwater wetland N retention and transformation are not well understood. Here, we show that repeated annual saltwater incursion during late summer droughts in the coastal plain of North Carolina changed N export from organic to inorganic forms and led to a doubling of annual NH₄⁺ export from a 440 hectare former agricultural field undergoing wetland restoration. Soil solution NH₄⁺ concentrations in two mature wetlands also increased with salinization, but the magnitude of increase was smaller than that in the former agricultural field. Long‐term saltwater exposure experiments with intact soil columns demonstrated that much of the increase in reactive N released could be explained by exchange of salt cations with sediment NH₄⁺. Using these findings together with the predicted flooding of 1661 km² of wetlands along the NC coast by 2100, we estimate that saltwater incursion into these coastal areas could release up to 18 077 Mg N, or approximately half the annual NH₄⁺ flux of the Mississippi River. Our results suggest that saltwater incursion into coastal freshwater wetlands globally could lead to increased N loading to sensitive coastal waters.     

模拟咸水入侵对崇明岛河岸带根际土壤微生物及反硝化作用的影响

通过模拟咸水入侵,研究了其对崇明岛河岸带根际土壤微生物及其反硝化过程的影响.结果表明:模拟咸水入侵后4种不同植被型河岸带土壤根际微生物区系发生显著变化,除放线菌菌群数量稍有增加外,细菌、真菌以及硝化和反硝化细菌数量均出现不同程度下降,特别是反硝化功能细菌数量较对照平均下降51.8％,说明河岸带土壤不同微生物区系对咸水入侵的响应存在显著差异.模拟咸水入侵后,河岸带土壤与氮转换相关的酶活性普遍受到抑制,且抑制作用随酶类型不同而存在差异,亚硝酸还原酶对咸水入侵最敏感,其活性较对照平均下降了43.5％,脲酶活性次之,其降幅为37.4％,而脱氢酶受咸水影响较小,其活性平均下降29.5％.模拟咸水入侵明显削弱了河岸带土壤反硝化作用,其速率平均下降34.9％.不同植被型河岸带土壤微生物对咸水入侵的生态生理响应存在显著差异,与对照相比,茭白根际土壤微生物数量和酶活性受咸水入侵的平均抑制率最大,土壤反硝化速率最小,其次是菖蒲和芦苇.在模拟咸水入侵下,菖蒲与芦苇混合群落根际土壤微生物数量、酶活性和反硝化速率抑制率明显低于单一植物模式,表明混合植被群落根际土壤微生物过程及反硝化作用对咸水入侵具有较好的缓冲性能.     

Microbial Community Response to Seawater Amendment in Low-Salinity Tidal Sediments

Rising sea levels and excessive water withdrawals upstream are making previously freshwater coastal ecosystems saline. Plant and animal responses to variation in the freshwater–saline interface have been well studied in the coastal zone; however, microbial community structure and functional response to seawater intrusion remains relatively unexplored. Here, we used molecular approaches to evaluate the response of the prokaryotic community to controlled changes in porewater salinity levels in freshwater sediments from the Altamaha River, Georgia, USA. This work is a companion to a previously published study describing results from an experiment using laboratory flow-through sediment core bioreactors to document biogeochemical changes as porewater salinity was increased from 0 to 10 over 35 days. As reported in Weston et al. (Biogeochemistry, 77:375–408, 62), porewater chemistry was monitored, and cores were sacrificed at 0, 9, 15, and 35 days, at which time we completed terminal restriction fragment length polymorphism and 16S rRNA clone library analyses of sediment microbial communities. The biogeochemical study documented changes in mineralization pathways in response to artificial seawater additions, with a decline in methanogenesis, a transient increase in iron reduction, and finally a dominance of sulfate reduction. Here, we report that, despite these dramatic and significant changes in microbial activity at the biogeochemical level, no significant differences were found between microbial community composition of control vs. seawater-amended treatments for either Bacterial or Archaeal members. Further, taxa in the seawater-amended treatment community did not become more “marine-like” through time. Our experiment suggests that, as seawater intrudes into freshwater sediments, observed changes in metabolic activity and carbon mineralization on the time scale of weeks are driven more by shifts in gene expression and regulation than by changes in the composition of the microbial community.     

Spatial distribution patterns of benthic microbial communities along the Pearl Estuary,China

In the present study, benthic microbial communities along the Pearl Estuary, a typical subtropical estuary in China subjected to extensive anthropogenic disturbance, were investigated using 16S rRNA gene-based pyrosequencing. The results showed that microbial communities in freshwater samples were clearly distinct from those in saltwater samples, since the relative sequence abundances of Deltaproteobacteria, Thermoplasmata and Marine Group I (MG-I) were higher in saltwater sediments, whereas Chloroflexi, Spirochaetes, Betaproteobacteria and methanogens were more prevalent in freshwater sediments. In addition, bacterial communities showed vertical stratifications in saltwater sediments, but remained constant with depth in freshwater sediments. The total organic carbon and carbon/nitrogen ratio in sediments correlated significantly with the overall community variations. The predominance of various microorganisms in specific niches led to efforts to identify their functional couplings by exploring their co-occurrence patterns. Using network analysis, strong positive correlations were observed between sulfate-reducing bacteria (SRB) and sulfur-oxidizing bacteria, and between SRB and nitrite-oxidizing bacteria, indicating the potential interactions of intra-sulfur cycle processes, as well as sulfur and nitrogen cycles, in coastal sediments. Archaeal clades revealed strong and wide correlations between the Miscellaneous Crenarchaeotal Group (MCG) and other groups, suggesting a central role of MCG in the coastal benthic environment. Inversely, MG-I displayed negative correlations with other clades, which might indicate that the lifestyles of heterotrophic and autotrophic clades were mutually exclusive. This study presented a detailed outline of the biogeographic patterns of benthic microbial communities along the Pearl Estuary and provided new information regarding the potential interactions of various biogeochemical cycles in coastal sediments.     

Novel microbial community composition and carbon biogeochemistry emerge over time following saltwater intrusion in wetlands

Sea level rise and changes in precipitation can cause saltwater intrusion into historically freshwater wetlands, leading to shifts in microbial metabolism that alter greenhouse gas emissions and soil carbon sequestration. Saltwater intrusion modifies soil physicochemistry and can immediately affect microbial metabolism, but further alterations to biogeochemical processing can occur over time as microbial communities adapt to the changed environmental conditions. To assess temporal changes in microbial community composition and biogeochemical activity due to saltwater intrusion, soil cores were transplanted from a tidal freshwater marsh to a downstream mesohaline marsh and periodically sampled over 1 year. This experimental saltwater intrusion produced immediate changes in carbon mineralization rates, whereas shifts in the community composition developed more gradually. Salinity affected the composition of the prokaryotic community but did not exert a strong influence on the community composition of fungi. After only 1 week of saltwater exposure, carbon dioxide production doubled and methane production decreased by three orders of magnitude. By 1 month, carbon dioxide production in the transplant was comparable to the saltwater controls. Over time, we observed a partial recovery in methane production which strongly correlated with an increase in the relative abundance of three orders of hydrogenotrophic methanogens. Taken together, our results suggest that ecosystem responses to saltwater intrusion are dynamic over time as complex interactions develop between microbial communities and the soil organic carbon pool. The gradual changes in microbial community structure we observed suggest that previously freshwater wetlands may not experience an equilibration of ecosystem function until long after initial saltwater intrusion. Our results suggest that during this transitional period, likely lasting years to decades, these ecosystems may exhibit enhanced greenhouse gas production through greater soil respiration and continued methanogenesis.     

Climate and soil texture influence patterns of forb species richness and composition in big sagebrush plant communities across their spatial extent in the western U.S.

Big sagebrush (Artemisia tridentata Nutt.) plant communities are widespread in western North America and, similar to all shrub steppe ecosystems worldwide, are composed of a shrub overstory layer and a forb and graminoid understory layer. Forbs account for the majority of plant species diversity in big sagebrush plant communities and are important for ecosystem function. Few studies have explored geographic patterns of forb species richness and composition and their relationships with environmental variables in these communities. Our objectives were to examine the fine and broad-scale spatial patterns in forb species richness and composition and the influence of environmental variables. We sampled forb species richness and composition along transects at 15 field sites in Colorado, Idaho, Montana, Nevada, Oregon, Utah, and Wyoming, built species-area relationships to quantify differences in forb species richness at sites, and used Principal Components Analysis, non-metric multidimensional scaling, and redundancy analysis to identify relationships among environmental variables and forb species richness and composition. We found that species richness was most strongly correlated with soil texture, while species composition was most related to climate. The combination of climate and soil texture influences water availability, which our results indicate has important consequences for forb species richness and composition, and suggests that climate change-induced modification of soil water availability may have important implications for plant species diversity in the future.     

Floristic composition and diversity changes over 60 years in eastern mulga communities of south central Queensland,Australia

Botanical surveys from prior to 1949 documented the plant species composition of the mulga (Acacia aneura) communities in the eastern Mulga Lands Bioregion of Queensland, Australia. These surveys recorded 282 vascular plant species including 268 natives and 14 exotics. Since 1949, mulga communities have experienced considerable modification through continuous grazing by domestic sheep and cattle even during drought periods and extensive vegetation clearance. To increase our knowledge on floristic composition and diversity change over this time, floristic data were recollected from mulga communities in the same region between 2007 and 2010 using a more systematic procedure. These surveys recorded 292 vascular plant species including 269 natives and 23 exotics. Species richness and composition within five life forms: tree, shrub, vine, forb and graminoid were compared between the recent survey data and the historical survey data. The majority of native plant species were either in the forb (45.4% of total native species) or graminoid (25.7% of total native species) life forms over the 60-year period. There was no significant difference in species richness between the historical and recent surveys within tree or shrub life forms, but there were differences in species richness in vine, forb and graminoid life forms over time. Similarities in native species between the historical and recent surveys were high. Sorensen Similarity Indices (ISS) were: 0.77 at species level, 0.84 at genus level and 0.87 at family level. In contrast, the similarity indices for exotic species was low (0.59) for species and genera (0.61), but high for families (0.86). More exotic species were recorded recently than historically. Among these, buffel grass (Pennisetum ciliare) and colocynth (Citrullus colocynthis) were more commonly encountered than other exotic species in the eastern mulga communities of south central Queensland, Australia.     

Electron acceptors for anaerobic oxidation of methane drive microbial community structure and diversity in mud volcanoes

Mud volcanoes (MVs) emit globally significant quantities of methane into the atmosphere, however, methane cycling in such environments is not yet fully understood, as the roles of microbes and their associated biogeochemical processes have been largely overlooked. Here, we used data from high‐throughput sequencing of microbial 16S rRNA gene amplicons from six MVs in the Junggar Basin in northwest China to quantify patterns of diversity and characterize the community structure of archaea and bacteria. We found anaerobic methanotrophs and diverse sulfate‐ and iron‐reducing microbes in all of the samples, and the diversity of both archaeal and bacterial communities was strongly linked to the concentrations of sulfate, iron and nitrate, which could act as electron acceptors in anaerobic oxidation of methane (AOM). The impacts of sulfate/iron/nitrate on AOM in the MVs were verified by microcosm experiments. Further, two representative MVs were selected to explore the microbial interactions based on phylogenetic molecular ecological networks. The sites showed distinct network structures, key species and microbial interactions, with more complex and numerous linkages between methane‐cycling microbes and their partners being observed in the iron/sulfate‐rich MV. These findings suggest that electron acceptors are important factors driving the structure of microbial communities in these methane‐rich environments.     

Salinity effects on greenhouse gas emissions from wetland soils are contingent upon hydrologic setting: a microcosm experiment

Coastal forested wetlands provide important ecosystem services such as carbon sequestration, nutrient retention, and flood protection, but they are also important sources of greenhouse gas emissions. Human appropriation of surface water and extensive ditching and draining of coastal plain landscapes are interacting with rising sea levels to increase the frequency and magnitude of saltwater incursion into formerly freshwater coastal wetlands. Both hydrologic change and saltwater incursion are expected to alter carbon and nutrient cycling in coastal forested wetlands. We performed a full factorial experiment in which we exposed intact soil cores from a coastal forested wetland to experimental marine salt treatments and two hydrologic treatments. We measured the resulting treatment effects on the emissions of carbon dioxide (CO₂), methane (CH₄), and nitrous oxide (N₂O) over 112 days. Salinity effects were compared across four treatments to isolate the effects of increases in ionic strength from the impact of adding a terminal electron acceptor (SO₄^2?). We compared control treatments (DI addition), to artificial saltwater (ASW, target salinity of 5 parts per thousand) and to two treatments that added sulfate alone (SO₄^2?, at the concentration found in 5 ppt saltwater) and saltwater with the sulfate removed (ASW-SO₄^2?, with the 5 ppt target salinity maintained by adding additional NaCl). We found that all salt treatments suppressed CO₂ production, in both drought and flooded treatments. Contrary to our expectations, CH₄ fluxes from our flooded cores increased between 300 and 1200% relative to controls in the ASW and ASW-SO₄^2? treatments respectively. In the drought treatments, we saw virtually no CH₄ release from any core, while artificial seawater with sulfate increased N₂O fluxes by 160% above DI control. In contrast, salt and sulfate decreased N₂O fluxes by 72% in our flooded treatments. Our results indicate that salinization of forested wetlands of the coastal plain may have important climate feedbacks resulting from enhanced greenhouse gas emissions and that the magnitude and direction of these emissions are contingent upon wetland hydrology.     

Accelerated microbial organic matter mineralization following salt-water intrusion into tidal freshwater marsh soils

The impact of salt-water intrusion on microbial organic carbon (C) mineralization in tidal freshwater marsh (TFM) soils was investigated in a year-long laboratory experiment in which intact soils were exposed to a simulated tidal cycle of freshwater or dilute salt-water. Gas fluxes [carbon dioxide (CO₂) and methane (CH₄)], rates of microbial processes (sulfate reduction and methanogenesis), and porewater and solid phase biogeochemistry were measured throughout the experiment. Flux rates of CO₂ and, surprisingly, CH₄ increased significantly following salt-water intrusion, and remained elevated relative to freshwater cores for 6 and 5 months, respectively. Following salt-water intrusion, rates of sulfate reduction increased significantly and remained higher than rates in the freshwater controls throughout the experiment. Rates of acetoclastic methanogenesis were higher than rates of hydrogenotrophic methanogenesis, but the rates did not differ by salinity treatment. Soil organic C content decreased significantly in soils experiencing salt-water intrusion. Estimates of total organic C mineralized in freshwater and salt-water amended soils over the 1-year experiment using gas flux measurements (18.2 and 24.9 mol C m^?2, respectively) were similar to estimates obtained from microbial rates (37.8 and 56.2 mol C m^?2, respectively), and to losses in soil organic C content (0 and 44.1 mol C m^?2, respectively). These findings indicate that salt-water intrusion stimulates microbial decomposition, accelerates the loss of organic C from TFM soils, and may put TFMs at risk of permanent inundation.     

Vegetation responses to different spatial patterns of soil disturbance in burned and unburned tallgrass prairie

Pocket gopher (Geomyidae) disturbances are created in spatiallypredictable patterns. This may influence resource heterogeneity and affectgrassland vegetation in a unique manner. We attempt to determine the extent towhich density and spatial pattern of soil disturbances influence tallgrassprairie plant community structure and determine how these disturbances interactwith fire. To investigate the effects of explicit disturbance patterns we createdsimulated pocket gopher burrows and mounds in various spatial patterns.Simulated burrows were drilled into the soil at different densities inreplicated plots of burned and unburned prairie. Separate plots of simulatedmounds were created in burned and unburned prairie at low, medium, or high mounddensities in clumped, uniform, or random spatial dispersions. In both burned and unburned plots, increased burrow density decreasedgraminoid biomass and increased forb biomass. Total-plant and graminoid biomasswere higher in burned than unburned plots while forb biomass was higher inunburned plots. Total-plant species richness was not significantly affected byburrow density or burning treatments, but graminoid species richness increasedin unburned plots and forb species richness increased in burned plots. Plant species richness was temporarily reduced directly on mounddisturbances compared to undisturbed prairie. Over time and at larger samplingscales, the interaction of fire and mound disturbance patterns significantlyaffected total-plant and graminoid species richness. The principal effect inburned and unburned prairie was decreased total-plant and graminoid speciesrichness with increased mound disturbance intensity. Although species richness at small patch scales was not increased by anyintensity of disturbance and species composition was not altered by theestablishment of a unique guild of disturbance colonizing plants, our studyrevealed that interactions between soil disturbances and fire alter the plantcommunity dominance structure of North American tallgrass prairie primarily viachanges to graminoids. Moreover, these effects become increasingly pronouncedover time and at larger spatial sampling scales.     

Competition between Hardwood Hammocks and Mangroves

A bstract The boundaries between mangroves and freshwater hammocks in coastal ecotones of South Florida are sharp. Further, previous studies indicate that there is a discontinuity in plant predawn water potentials, with woody plants either showing predawn water potentials reflecting exposure to saline water or exposure to freshwater. This abrupt concurrent change in community type and plant water status suggests that there might be feedback dynamics between vegetation and salinity. A model examining the salinity of the aerated zone of soil overlying a saline body of water, known as the vadose layer, as a function of precipitation, evaporation and plant water uptake is presented here. The model predicts that mixtures of saline and freshwater vegetative species represent unstable states. Depending on the initial vegetation composition, subsequent vegetative change will lead either to patches of mangrove coverage having a high salinity vadose zone or to freshwater hammock coverage having a low salinity vadose zone. Complete or nearly complete coverage by either freshwater or saltwater vegetation represents two stable steady-state points. This model can explain many of the previous observations of vegetation patterns in coastal South Florida as well as observations on the dynamics of vegetation shifts caused by sea level rise and climate change.     

Acetogenic and sulfate-reducing bacteria inhabiting the rhizoplane and deep cortex cells of the sea grass Halodule wrightii.

Recent declines in sea grass distribution underscore the importance of understanding microbial community structure-function relationships in sea grass rhizospheres that might affect the viability of these plants. Phospholipid fatty acid analyses showed that sulfate-reducing bacteria and clostridia were enriched in sediments colonized by the sea grasses Halodule wrightii and Thalassia testudinum compared to an adjacent unvegetated sediment. Most-probable-number analyses found that in contrast to butyrate-producing clostridia, acetogens and acetate-utilizing sulfate reducers were enriched by an order of magnitude in rhizosphere sediments. Although sea grass roots are oxygenated in the daytime, colorimetric root incubation studies demonstrated that acetogenic O-demethylation and sulfidogenic iron precipitation activities were tightly associated with washed, sediment-free H. wrightii roots. This suggests that the associated anaerobes are able to tolerate exposure to oxygen. To localize and quantify the anaerobic microbial colonization, root thin sections were hybridized with newly developed (33)P-labeled probes that targeted (i) low-G+C-content gram-positive bacteria, (ii) cluster I species of clostridia, (iii) species of Acetobacterium, and (iv) species of Desulfovibrio. Microautoradiography revealed intercellular colonization of the roots by Acetobacterium and Desulfovibrio species. Acetogenic bacteria occurred mostly in the rhizoplane and outermost cortex cell layers, and high numbers of sulfate reducers were detected on all epidermal cells and inward, colonizing some 60% of the deepest cortex cells. Approximately 30% of epidermal cells were colonized by bacteria that hybridized with an archaeal probe, strongly suggesting the presence of methanogens. Obligate anaerobes within the roots might contribute to the vitality of sea grasses and other aquatic plants and to the biogeochemistry of the surrounding sediment.     

Inundation,Vegetation, and Sediment Effects on Litter Decomposition in Pacific Coast Tidal Marshes

The cycling and sequestration of carbon are important ecosystem functions of estuarine wetlands that may be affected by climate change. We conducted experiments across a latitudinal and climate gradient of tidal marshes in the northeast Pacific to evaluate the effects of climate- and vegetation-related factors on litter decomposition. We manipulated tidal exposure and litter type in experimental mesocosms at two sites and used variation across marsh landscapes at seven sites to test for relationships between decomposition and marsh elevation, soil temperature, vegetation composition, litter quality, and sediment organic content. A greater than tenfold increase in manipulated tidal inundation resulted in small increases in decomposition of roots and rhizomes of two species, but no significant change in decay rates of shoots of three other species. In contrast, across the latitudinal gradient, decomposition rates of Salicornia pacifica litter were greater in high marsh than in low marsh. Rates were not correlated with sediment temperature or organic content, but were associated with plant assemblage structure including above-ground cover, species composition, and species richness. Decomposition rates also varied by litter type; at two sites in the Pacific Northwest, the grasses Deschampsia cespitosa and Distichlis spicata decomposed more slowly than the forb S. pacifica. Our data suggest that elevation gradients and vegetation structure in tidal marshes both affect rates of litter decay, potentially leading to complex spatial patterns in sediment carbon dynamics. Climate change may thus have direct effects on rates of decomposition through increased inundation from sea-level rise and indirect effects through changing plant community composition.     

Iron sulfide formation on root surfaces controlled by the life cycle of wild rice (<Emphasis Type="Italic">Zizania palustris</Emphasis>)

Iron sulfide plaques have been observed on roots of wild rice (Zizania palustris) and other wetland plants grown in sulfur-impacted freshwater ecosystems, but the mechanism of their formation and ramifications for plants have not been investigated. We exposed a model annual wetland plant, Zizania palustris, to elevated sulfate concentrations (3.1 mM) and quantified the development of iron oxide and iron sulfide precipitates on root surfaces throughout the plant life cycle. During the onset of seed production, root surfaces amended with sulfate transitioned within 1 week from iron (hydr)oxide plaques to iron sulfide plaques. During the same week, Fe(III) decreased on roots of plants not amended with sulfate but FeS did not accumulate. Prior to FeS accumulation, sulfate-amended plants had taken up the same amount of N as unamended plants. After FeS accumulation, total plant nitrogen did not increase further on sulfate-amended plants, indicating a cessation in nitrogen uptake, whereas total plant N continued to increase in unamended plants. Sulfate-amended plants produced fewer and lighter seeds with less nitrogen than unamended plants. FeS precipitation on roots may be associated with elevated sulfide and inhibited nitrogen uptake before the end of the plant’s life cycle, thus affecting the populations of this annual aquatic plant. We propose a mechanism by which a physiologically-induced decline in radial oxygen loss near the end of a plant’s life cycle initiates a precipitous decline in redox potential at the root surface and in adjacent porewater, initiating accumulation of iron sulfide plaques. These plaques could be an important locus for iron sulfide accumulation in wetland sediments.     

Linking soil process and microbial ecology in freshwater wetland ecosystems

Soil microorganisms mediate many processes such as nitrification, denitrification, and methanogenesis that regulate ecosystem functioning and also feed back to influence atmospheric chemistry. These processes are of particular interest in freshwater wetland ecosystems where nutrient cycling is highly responsive to fluctuating hydrology and nutrients and soil gas releases may be sensitive to climate warming. In this review we briefly summarize research from process and taxonomic approaches to the study of wetland biogeochemistry and microbial ecology, and highlight areas where further research is needed to increase our mechanistic understanding of wetland system functioning. Research in wetland biogeochemistry has most often been focused on processes (e.g., methanogenesis), and less often on microbial communities or on populations of specific microorganisms of interest. Research on process has focused on controls over, and rates of, denitrification, methanogenesis, and methanotrophy. There has been some work on sulfate and iron transformations and wetland enzyme activities. Work to date indicates an important process level role for hydrology and soil nutrient status. The impact of plant species composition on processes is potentially critical, but is as yet poorly understood. Research on microbial communities in wetland soils has primarily focused on bacteria responsible for methanogenesis, denitrification, and sulfate reduction. There has been less work on taxonomic groups such as those responsible for nitrogen fixation, or aerobic processes such as nitrification. Work on general community composition and on wetland mycorrhizal fungi is particularly sparse. The general goal of microbial research has been to understand how microbial groups respond to the environment. There has been relatively little work done on the interactions among environmental controls over process rates, environmental constraints on microbial activities and community composition, and changes in processes at the ecosystem level. Finding ways to link process-based and biochemical or gene-based assays is becoming increasingly important as we seek a mechanistic understanding of the response of wetland ecosystems to current and future anthropogenic perturbations. We discuss the potential of new approaches, and highlight areas for further research.     

Short-Term Summer Inundation as a Measure to Counteract Acidification in Rich Fens

In regions with intensive agriculture, water level fluctuation in wetlands has generally become constricted within narrow limits. Water authorities are, however, considering the re-establishment of fluctuating water levels as a management tool in biodiverse, base-rich fens (‘rich fens’). This includes temporary inundation with surface water from ditches, which may play an important role in counteracting acidification in order to conserve and restore biodiversity. Inundation may result in an increased acid neutralizing capacity (ANC) for two reasons: infiltration of base-rich inundation water into peat soils, and microbial alkalinity generation under anaerobic conditions. The main objectives of this study were to test whether short-term (2 weeks) summer inundation is more effective than short-term winter inundation to restore the ANC in the upper 10 cm of non-floating peat soils, and to explain potential differences. Large-scale field experiments were conducted for five years in base-rich fens and Sphagnum-dominated poor fens. Winter inundation did not result in increased porewater ANC, because infiltration was inhibited in the waterlogged peat and evapotranspiration rates were relatively low. Also, low temperatures limit microbial alkalinity generation. In summer, however, when temperature and evapotranspiration rates are higher, inundation resulted in increased porewater Ca and HCO₃ ^- concentrations, but only in areas with characteristic rich fen bryophytes. This increase was not only due to stronger infiltration into the soil, but also to higher microbial alkalinity generation under anaerobic conditions. In contrast, porewater ANC did not increase in Sphagnum-plots as a result of the ability of Sphagnum spp. to acidify their environment. In both rich and poor fens, flooding-induced P-mobilization remained sufficiently low to safeguard P-limited vegetation. NO₃ ^- and NH₄ ⁺ dynamics showed no considerable changes either. In conclusion, short-term summer inundation with base-rich and nutrient-poor surface water is considered beneficial in the management of non-floating rich fens, and much more effective than winter inundation.     

Comparative evaluation of anaerobic bacterial communities associated with roots of submerged macrophytes growing in marine or brackish water sediments

Sediment microbial communities are important for seagrass growth and carbon cycling, however relatively few studies have addressed the composition of prokaryotic communities in seagrass bed sediments. Selective media were used enumerate culturable anaerobic bacteria associated with the roots of the seagrass, Halodule wrightii, the fresh to brackish water plant, Vallisneria americana, and the respective vegetated and unvegetated sediments. H. wrightii roots and sediments had high numbers of sulfate-reducing bacteria whereas iron-reducing bacteria appeared to have a more significant role in V. americana roots and sediments. Numbers of glucose-utilizing but not acetate-utilizing iron reducers were higher on the roots of both plants relative to the vegetated sediments indicating a difference within the iron reducing bacterial community. H. wrightii roots had lower glucose-utilizing iron reducers, and higher acetogenic bacteria than did V. americana roots suggesting different aquatic plants support different anaerobic microbial communities. Sulfur-disproportionating and sulfide-oxidizing bacteria were also cultured from the roots and sediments. These results provide evidence of the potential importance of sulfur cycle bacteria, in addition to sulfate-reducing bacteria, in seagrass bed sediments.