Modeling and analysis of elution stage of biospecific adsorption in finite bath

A model is developed and used to predict the dynamic behavior of the elution stage of biospecific adsorption (affinity chromatography) in a finite bath. Both nonselective and selective elution of monovalent adsorbates is considered. The model expressions account for film and pore diffusion resistances for the adsorbate(s) and the eluent, and various rate expressions for the desorption of the adsorbate from the adsorbate-ligand complex are constructed and studied. The results indicate that the duration of the elution stage depends significantly on the Sherwood number of the adsorbate and the rate of the interaction step between the ligand and the adsorbate relative to the diffusion of the adsorbate in the pore during elution. In nonselective elution, when the value of the effective pore diffusivity of the eluent is significantly larger than that of the adsorbate, the results suggest that it would be advantageous to use an initial eluent concentration in the finite bath that is only slightly higher than the critical eluent concentration in order to minimize the risk of product and ligand damage. In selective elution the amount of adsorbate recovered in the elution stage is greatly influenced by the initial concentration of the eluent and the equilibrium dissociation constants of the adsorbate-ligand and adsorbate-eluent complexes.     

Restricted diffusion of molecules in porous affinity chromatography adsorbents.

A restricted diffusion model is constructed and solved in order to study the permeability of large adsorbate molecules in the pores of affinity chromatography media, when the adsorbate molecules are adsorbed onto immobilized ligands. The combined effects of steric hindrance at the entrance to the pores and frictional resistance within the pores, as well as the effects of pore size distribution, pore connectivity of the adsorbent, molecular size of adsorbate and ligand, and the fractional saturation of adsorption sites (ligands), are considered. Affinity adsorbents with dilute and high ligand concentrations are examined, and the permeability of the adsorbate in porous networks of connectivity nT is studied by means of effective medium approximation (EMA) numerical solutions. As expected, the permeability of the adsorbate decreases as the size of the adsorbate and/or ligand molecule increases. The permeability also decreases when the fractional saturation of the ligands increases, as well as when the pore connectivity of the network decreases. The dependence of the permeability on the pore connectivity tends to be less marked in adsorbents with concentrated ligand than in porous media with dilute ligand concentration. The conditions are also presented for which the percolation threshold is attained in a number of different systems. The restricted diffusion model and results of this work may be of importance in studies involving the modeling, prediction of the dynamic behavior, design, and control of affinity chromatography (biospecific adsorption) systems employing porous adsorbents. The theoretical results may also have important implications in the selection of a ligand as well as in the selection and construction of an affinity porous matrix, so that the adsorbate of interest can be efficiently separated from a given solution. Furthermore, with appropriate modifications this restricted diffusion model may be used in studies involving the immobilization of ligands or enzymes in porous solids.     

Biospecific adsorption of lysozyme onto monoclonal antibody ligand immobilized on nonporous silica particles

It is very important to understand the equilibrium and dynamic characteristics of biospecific adsorption (affinity chromatography) for both scientific and application purposes. Experimental equilibrium and dynamic column data are presented on the adsorption of lysozyme onto antibody immobilized on nonporous silica particles. The Langmuir model is found to represent the equilibrium experimental data satisfactorily, and the equilibrium association constants and heats of adsorption have been estimated for two systems with different ligand densities. The effects of nonspecific interactions are more pronounced in the system with low-density ligand. The dynamic interaction kinetic parameters are estimated by matching the predictions of a fixed-bed model with the experimental breakthrough curves. The agreement between theory and experiment is good for the initial phases of breakthrough, where the mechanism of biospecific adsorption is dominant. In the later phase (saturation neighborhood) of breakthrough, the effects of nonspecific interactions appear to be greater in the low-density ligand system. The kinetics of the nonspecific interactions were estimated from the data of the later phase of breakthrough and were found to be considerably slower than those attributed to biospecific adsorption.     

Surface-labelling studies on skeletal-muscle cells in vitro. Heterogeneity of iodinated cell-surface proteins.

Some theoretical aspects of the desorption of a column-bound protein by elution with its biospecific ligand are considered in cases where, in comparison with the unliganded protein, the protein-ligand complex has a diminished but finite affinity for the adsorbent. A quantity termed the biospecific sensitivity, B, is introduced to facilitate comparison between different systems. Biospecific sensitivity may be defined as the fractional change in standard free energy of adsorption on formation of the protein-ligand complex. The effects of a moderate-to-low biospecific sensitivity on theoretical desorption profiles have been examined by using a computer simulation of the classical multiple-plate column model. Desorption was simulated under various boundary conditions involving protein-adsorbent and protein-ligand affinities and the initial concentrations of adsorption sites, protein and ligand. These simulations suggest that, when the biospecific sensitivity is low, desorption is optimized if (a) the unliganded protein is adsorbed as weakly as possible, (b) the column is loaded to near-saturation with the required protein, (c) the free ligand concentration is many times greater than that giving near-saturation of the protein in free solution, and (d) protein contaminants with high affinity for the adsorbent, and present in large amount, are removed in preliminary purification steps.     

The modeling and analysis of the elution stage of biospecific adsorption in fixed beds

A mathematical model that describes the dynamic behavior of the elution stage of biospecific adsorption (affinity chromatography) in a fixed bed is developed and solved. Both non-selective and selective elution methods are considered. The results show that the duration of the elution stage for a given bed length decreases as the value of the Porath parameter for elution increases. The concentrating effect of the elution stage on the adsorbate of interest increases as the bed length and the value of the Porath parameter for elution increase. It is shown that it is inappropriate to assume that the eluent is infinitely fast distributed within the pores of the particles, and an interesting result involving a local maximum in the effluent concentration of the selective eluent is obtained when the direction of flow in the elution stage is the same as in the adsorption and wash stages and the bed length is large. When the direction of flow during elution is opposite (as compared to being the same) to that employed in the adsorption and wash stages, a shorter total elution time is obtained. The advantage gained with a reversed flow increases as the bed length decreases.     

Importance of Metal–Adsorbate Interactions for the Surface-enhanced Raman Scattering of Molecules Adsorbed on Plasmonic Nanoparticles

The interaction between adsorbates of different nature and plasmonic nanoparticles is reviewed here on the basis of the work done in our laboratory in the past few years. The paper is structured for analyzing the interaction of adsorbates with metal nanoparticles as function of the interacting atom (O, N, or S) and the adsorbate conformation. In the study of the adsorption of molecular species on metals, it is necessary to take into account that different interaction mechanisms are possible, leading to the existence of different molecular forms (isomers or conformers). These forms can be evidenced by changing the excitation wavelength, due to a resonant selection of these wavelengths. Charge-transfer complexes and electrostatic interactions are the usual driving forces involved in the interaction of adsorbates on metal surfaces when these metallic systems are used in wet conditions. The understanding of the metal–adsorbate interaction is crucial in the surface functionalization of metal surfaces, which has a growing importance in the development of sensing systems or optoelectronic devices. In relation to this, special attention is paid in this work to the study of the adsorption of calixarene host molecules on plasmonic nanoparticles.     

In vitro modeling of cell-scaffold interaction

A simple method of controlling the efficiency of surface ligand-cell receptor interaction has been developed in the course of modeling the specific adhesion of cells on a support with their subsequent proliferation and bone tissue formation, using affinity chromatography on macroporous monolithic sorbents. The biospecific peptide GRGDSP played the role of an active ligand on the support, whereas cells were simulated by polymeric (polystyrene) microparticles with the peptide EDYPVDIYYLMDLSYSMKDD immobilized on their surface. The latter peptide is part of the active site of the integrin molecule responsible for binding the RGD sequence. Thus, the monolithic ultrashort column (CIM® disk) represented a simplified model of the support (structural scaffold) possessing biospecific properties. The parameters of the interaction of affinity partners were quantitatively estimated by frontal analysis involving the construction of adsorption isotherms, followed by their linearization and mathematical processing. The data obtained indicate a high specificity of biological pairing, which is supported by the results of cell culture experiments.     

Examination of protein adsorption in fluidized bed and packed bed columns at different temperatures using frontal chromatographic methods

The influences of various experimental parameters on the dynamic adsorption capacity (DAC) and the dynamic adsorption rate (DAR) of a biomimetic affinity silica-based adsorbent in fluidized and packed bed columns operated under plug flow conditions and at different temperatures have been investigated with different inlet concentrations of hen egg white lysozyme (HEWL) and human serum albumin (HSA). The DACs as well as the DARs of both the fluidized and packed beds were examined at 10% saturation (i.e., at the QB value) and the experimental data compared with the corresponding data obtained from batch equilibrium adsorption procedures. Parameters examined included the fluid superficial velocity and protein concentration and their effect on the binding capacity and column efficiency. Consistent with various results reported from this and other laboratories on the behavior of biospecific affinity adsorbents derived from porous silica and zirconia particles, adsorbents prepared from Fractosil 1000 were found to exhibit appropriate rheological characteristics in fluidized bed systems under the experimental conditions. Moreover, changes in temperature resulted in a more significant effect on the breakthrough profiles of HSA compared to HEWL with the immobilized Cibacron Blue F3G-A with Fractosil 1000 adsorbent. This result suggests that temperature effects can possibly be employed profitably in some processes as part of a strategy to enhance column performance with fluidized bed systems for selective recovery of target proteins. At relatively low superficial velocities of the feed, the DARs with HEWL and HSA were similar for both the fluidized and packed bed column systems, whereas, at high superficial velocities, the DARs for these proteins were larger with the packed bed columns.     

Protein-membrane interactions: Equilibrium adsorption and binding of proteins and polyamino acids on erythroblasts transformed by friend virus

Equilibrium adsorption and binding isotherms at different pH values and temperatures were used to study the mechanism of interaction of 6 proteinaceous compounds with erythroblasts transformed by Friend virus (HFL cells). The molecular weight of the adsorbate appeared to influence the amounts adsorbed: fewer moles interacted with increasing molecular weight. The pI value affected binding of adsorbates of low molecular weight in an almost linear way: more moles bound with increasing pI value. Polylysine and polysarcosine adsorbed to labile components on the cell surface. Gelatin,lysozyme, ovalbumin, and polysarcosine interacted with pronase-susceptible, Concanavalin A and polylysine with non-susceptible components.     

Some considerations for optimization of desorption chromatography

The effect of isotherm parameters of a displacer on the efficiency of desorption Chromatography has been investigated numerically. A general nonlinear multicomponent rate equation model with Langmuir isotherm was used in this study. It was found that the best displacer in this kind of operation is usually not the one that is more strongly adsorbed than the adsorbates when the operation is to displace and concentrate the adsorbates from a saturated or partially saturated column and to minimize the amount of displacer used. The desorption Chromatography is different from the classical displacement development in both operational purpose and the requirement for the displacer. The desorption Chromatography in industrial practice was also analyzed and discussed for the case in which the displacer is introduced in either the same or the reverse flow direction after an incomplete frontal adsorption operation.     

Steroidumwandelnde enzyme aus mikro-organismen—VIII. Einfluβ organischer lösungsmittel unterschiedlicher hydrophobizität auf die bindung an der affinitätsmatrix-affinitätschromatographie einer 4-en-3-oxo-steroid: (akzeptor)-1-en-oxidoreduktase aus Nocardia opaca

In the presence of organic solvents the biospecific adsorption of a 4-en-3-oxosteroid: (acceptor)-l-enoxidoreductase (EC 1.3.99.4.) from Nocardia opaca on an immobilized testosterone ligand was investigated. Between hydrophobicity of the solvent and the matrix-binding of enzyme a quantitative relation was found. Thus a linear correlation was obtained of the logarithmic relation of matrix bound and free enzyme activity (log B) with the logarithms of the distribution coeffizient in the system octanol/ water (log P) of the organic solvents: log B = 0.002 (±0.067) + 0.300 (±0.051) log P. Thus a further quantitative relation was obtained for affinity chromatography and for investigation of the nature of biospecific interaction between steroid ligand and protein.     

Co-operative binding interactions in affinity chromatography: Theoretical considerations

A theoretical relationship has been developed to allow the effect of free ligand concentration on the capacity of an affinity Chromatography matrix to be determined where the protein adsorbed shows co-operative binding. Computer simulations using literature values for association constants show that under optimal conditions resin capacity can be increased significantly in the presence of a small but finite concentration of free ligand. The model also allows prediction of the soluble ligand concentration required for biospecific elution. The results obtained suggest the possibility of a new elution technique, "reverse biospecific elution," that reduces the amount of free ligand required to effect elution.     

An extension of the tersoff-hamann model for a molecule on a graphite support: STM-image construction

A method is proposed for the theoretical construction of STM images of adsorbates on a graphite support. Tunnel current is taken to be proportional to the local density of graphite electronic states perturbed by the interaction with the adsorbed molecule. The coefficients of mixing of the graphite states with the adsorbate MOs are found by first-order perturbation theory, using the CNDO-S² method to calculate the adsorbate electronic structure together with analytical expressions for the graphite states. The long-distance behavior of adsorbate MOs is taken into account by means of energy-dependent MO asymptotics. As an example of the implications of this technique, the theoretical STM images of benzene and butane molecules on a graphite surface are presented and discussed.     

Hemoglobin transition in erythrocytes of developing chick. Studies with cell-free protein-synthesizing systems.

Cell-free hemoglobin-synthesizing systems from erythrocytes of 4- and 17-day chick embryos have been developed. These systems have been used to investigate possible structural and functional differences in factors involved in protein synthesis obtained from these different developmental stages. Each cell-free system consists of three major cellular fractions i.e., the S-100 supernatant, the salt-washed ribosomes, and the 0.5 m KCl ribosomal wash. When the ribosomal wash fraction from one developmental stage is included in a cell-free system containing ribosomes and S-100 supernatant from the other developmental stage, a drastic reduction in the kinetics of [³H]leucine incorporation into globin products is observed, when compared to the homologous control cell-free systems. A similar depression of the kinetics of incorporation is observed when the mixed component is either the S-100 supernatant or the ribosomes. Control rates of incorporation can be reestablished when the corresponding homologous component is added back to the incubation mixture. The predominant types of hemoglobins produced in the salt-wash heterologous systems are those hemoglobins characteristic of the developmental stage of the salt wash. This seems to imply that the ribosomal salt-wash fraction may possess developmental stage specificity for the globins.     

Preparative purification of a recombinant protein by hydrophobic interaction chromatography: modulation of selectivity by the use of chaotropic additives

Development and implementation of a chaotropic wash step following protein loading on a hydrophobic interaction chromatographic (HIC) column is described for the purification of a recombinant protein. Various agents that reduce protein affinity in hydrophobic interaction chromatographic systems were screened for their utility in a wash step following protein loading on a Phenyl Fast Flow Sepharose HIC column. A combination of sodium thiocyanate, glycerol, and urea was selected as a suitable additive for the wash buffer that selectively eluted most of the major impurities present in the feed stream. Eluate purity, as monitored by reversed-phase chromatography and SDS-PAGE, was significantly increased by incorporation of this wash step in the purification process. Incorporation of this wash step on HIC enabled a reduction in the overall number of chromatographic steps in the downstream purification process for this recombinant protein, resulting in improved process yields and significant economic advantages.The effect of varying concentrations of each of the three wash additives on yield was studied. While the step yield decreased with an increase in concentration for urea and sodium thiocyanate, an optimum was observed with respect to glycerol concentration. The preferential interaction theory is employed to explain this effect.     

Isolation of a recombinant formate dehydrogenase by pseudo-affinity expanded bed adsorption.

Formate dehydrogenase (FDH) is an enzyme of industrial interest, which is recombinantly expressed as an intracellular protein in Escherichia coli. In order to establish an efficient and reliable purification protocol, an expanded bed adsorption (EBA) process was developed, starting from the crude bacterial homogenate. EBA process design was performed with the goal of finding operating conditions which, on one hand, allow efficient adsorption of the target protein and which, on the other hand, support the formation of a perfectly classified fluidised bed (expanded bed) in the crude feed solution. A pseudo-affinity ligand (Procion Red HE3B) was used to bind the FDH with high selectivity and reasonable capacity (maximum equilibrium capacity of 30 U/ml). Additionally, a simplified modelling approach, involving small packed beds for generation of process parameters, was employed for defining the operating conditions during sample application. In combination with extended elution studies, a process was set up, which could be scaled up to 7.5 l of adsorbent volume yielding a total amount of 100,000 U of 94% pure FDH per run. On this scale, 19 l of a benzonase-treated E. coli homogenate of 15% wet-weight (pH 7.5, 9 mS/cm conductivity) were loaded to the pseudo-affinity adsorbent (0.25 m sed. bed height, 5 x 10(-4) m/s fluid velocity). After a series of two wash steps, a particle-free eluate pool was obtained with 85% yield of FDH. This excellently demonstrates the suitability of expanded bed adsorption for efficient isolation of proteins by combining solid-liquid separation with adsorptive purification in a single unit operation.     

Weak partitioning chromatography for anion exchange purification of monoclonal antibodies

Weak partitioning chromatography (WPC) is an isocratic chromatographic protein separation method performed under mobile phase conditions where a significant amount of the product protein binds to the resin, well in excess of typical flowthrough operations. The more stringent load and wash conditions lead to improved removal of more tightly binding impurities, although at the cost of a reduction in step yield. The step yield can be restored by extending the column load and incorporating a short wash at the end of the load stage. The use of WPC with anion exchange resins enables a two-column cGMP purification platform to be used for many different mAbs. The operating window for WPC can be easily established using high throughput batch-binding screens. Under conditions that favor very strong product binding, competitive effects from product binding can give rise to a reduction in column loading capacity. Robust performance of WPC anion exchange chromatography has been demonstrated in multiple cGMP mAb purification processes. Excellent clearance of host cell proteins, leached Protein A, DNA, high molecular weight species, and model virus has been achieved.     

Potential of biosensor technology for the characterization of interactions by quantitative affinity chromatography

This review places the characterization of interactions by biosensor technology in the broader context of their study by quantitative affinity chromatography. The general reluctance to consider biosensor-based characterization as a form of quantitative affinity chromatography on the grounds of a difference in aims of the two techniques reflects a mistaken belief that BIAcore and IAsys studies characterize the kinetics of the chemical reaction responsible for biospecific adsorption of a soluble reactant to an immobilized form of its affinity partner. It now transpires that the association and dissociation rate constants thereby determined refer to thermodynamic characterization of biospecific adsorption in terms of a single-phase model in which affinity sites are distributed uniformly throughout the liquid-phase volume accessible to the partitioning reactant—the model used for characterization of biospecific adsorption by quantitative affinity chromatography. In that light the most important attribute of biosensor technology is its potential for thermodynamic characterization of biospecific adsorption by virtue of its ability to monitor complex formation directly; and hence its potential for the characterization of interactions with affinities that are too strong for study by forms of quantitative affinity chromatography that monitor complex formation on the basis of reactant depletion from the liquid phase. Kinetic as well as thermodynamic analyses of biosensor data are described for attainment of that potential.     

Prediction of adsorption from multicomponent solutions by activated carbon using single-solute parameters

The adsorption of 3 barbiturates—phenobarbital, mephobarbital, and primidone—from simulated intestinal fluid (SIF), without pancreatin, by activated carbon was studied using the rotating bottle method. The concentrations of each drug remaining in solution at equilibrium were determined with the aid of a high-performance liquid chromatography (HPLC) system employing a reversed-phase column. The competitive Langmuir-like model, the modified competitive Langmuir-like model, and the LeVan-Vermeulen model were each fit to the data. Excellent agreement was obtained between the experimental and predicted data using the modified competitive Langmuir-like model and the LeVan-Vermeulen model. The agreement obtained from the original competitive Langmuir-like model was less satisfactory. These observations are not surprising because the competitive Langmuir-like model assumes that the capacities of the adsorbates are equal, while the other 2 models take into account the differences in the capacities of the components. The results of these studies indicate that the adsorbates employed are competing for the same binding sites on the activated carbon surface. The results also demonstrate that it is possible to accurately predict multicomponent adsorption isotherms using only single-solute isotherm parameters. Such prediction is likely to be useful for improving in vivo/in vitro correlations.     

Affinity chromatographic sorting of carboxypeptidase a and its chemically modified derivatives

Carboxypeptidase A and derivatives obtained by chemical modification of various active center components were subjected to affinity chromatography on a p-aminobenzylsuccinic acid-Sepharose 4B conjugate. Tetardation of the enzyme on the column was dependent on the residue modified when elution was carried out with 0.3 m NaCl at pH 7.0. Both the functional zinc atom and the active site residue Glu-270 are essential for effective adsorption while alteration of residues involved in hydrophobic interaction with substrate or in recognition of its terminal carboxyl group decreased retention on the affinity matrix. Elution of native carboxypeptidase with competing soluble benzylsuccinic acid indicated that only active center binding of the immobilized inhibitor accounts for retardation of the enzyme on the column. Hence, affinity chromatography on this biospecific adsorbent using mild elution conditions (which do not distort protein structure) provides an excellent tool for the rapid isolation and purification of active center modified enzyme even from a complex mixture of reaction products.