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1.
The human regulatory subunit RIβ of cAMP-dependent protein kinases was expressed in Escherichia coli as a fusion protein with glutathione S -transferase. Purification was performed by affinity chromatography on glutathione-agarose beads after cleavage with thrombin. The human recombinant Riff protein migrated at 55 kDa on SDS-PAGE and displayed immunoreactivity with an anti-human RIβ antiserum. Furthermore, the purified recombinant RIβ protein was shown to exist as a dimer that was able to form holoenzyme with the catalytic subunit Cα. The rate of RIβ22 holoenzyme formation was faster in the presence than in the absence of MgATP. The kinase activity measured before and after adding cAMP to the holoenzyme showed that the presence of cAMP resulted in holoenzyme dissociation and release of active Cα-subunit, due to cAMP binding to RIβ. Compared to a RIα22 holoenzyme, the RIβ22 holoenzyme exhibited a more than twofold higher sensitivity to cAMP. The subcellular localization of Riff was analyzed in quiescent REF-52 fibroblasts and Wistar rat thyroid (WRT) cells after microinjection of fluorescently labeled proteins into the cytoplasm. A cytoplasmic distribution was observed when free RIβ was injected, whereas free Cα injected into the cytoplasm appeared in the nucleus. When holoenzymes with labeled Riff and unlabeled Cα, or unlabeled RIβ and labeled Cα, were injected, unstimulated cells showed fluorescence in the cytoplasm of both cell types. REF-52 cells stimulated with 8-bromo-cAMP (8-Br-cAMP) and WRT cells treated with thyrotropin (TSH) showed fluorescence mainly in the cytoplasm when RIβ was the labeled subunit of the in vivo dissociated bioenzyme. In contrast, nuclear fluorescence was evident from the release and translocation of labeled Cα from the holoenzyme complex after stimulation with 8-Br-cAMP or TSH.  相似文献   

2.
The distribution patterns of reptiles in the Riff region, northern Morocco   总被引:1,自引:0,他引:1  
A biogeographical classification of reptiles in the Riff region (northern Morocco, Africa) was carried out to look for shared distribution patterns, here termed chorotypes. Baroni‐Urbani & Buser's similarity index was applied to the presence/absence data of reptiles in 10×10 km UTM (Universal Transverse Mercator) squares, and then UPGMA (Unweighted Pair‐Group Method using arithmetic average) was used to classify the species. A probabilistic method was employed to assess the statistical significance of the groups obtained. An ordination method, the Canonical Correspondence Analysis, was also used to study the distribution of the reptiles within a continuous framework.
A gradual longitudinal replacement of reptile species was found throughout the Riff, with no sharp discontinuities for the distributions of most of the species. This may be due to the biogeographical northward movement of the Saharan boundaries, which have not yet reached biogeographical equilibrium. Thus, Saharan reptiles enter the Riff region from the east, through the lower basin of the River Moulouya.
Seven reptile chorotypes were identified in the Riff, and these comprise Mediterranean species and others endemic to the Maghreb (the region that spans most of North‐western Africa, excluding the Sahara). These chorotypes have a western distribution, and are segregated from one another according to altitude. Historical and ecological processes can account for the distributions shared by these species, which have inhabited the Riff for longer than eastern reptiles.  相似文献   

3.
Findings of a rare fish, Andriashevs eel cod Muraenolepis andriashevi Balushkin et Prirodina, 2005 (Muraenolepididae), from Discovery Seamount (South Atlantic) are described. The new findings extend the geographical distribution area and the range of morphological variability of this species previously known only from two type-specimens from the Agulhas Bank (South Africa).  相似文献   

4.
Alkaline protease production by a newly isolated Bacillus species from laundry soil was studied for detergent biocompatibility. From its morphological and nucleotide sequence (about 1.5 kb) of its 16S rDNA it was identified as Bacillus species with similarity to Bacillus species Y (Gen Bank entry: ABO 55095), and close homology with Bacillus cohnii YN-2000 (Gen Bank entry: ABO23412). Partial purification of the enzyme by ammonium sulfate (50–70% saturation) yielded 8-fold purity. Casein zymography and Sodium dodecylsulphate-Polyacrylamide gel electrophoresis (SDS-PAGE) of the partially purified enzyme revealed two isozymes of molecular sizes approximately 66 kDa and 18 kDa, respectively. The enzyme was most active at pH 12 and 50°C. At pH 12 the enzyme was stable for 5 h and retained 60% activity. The enzyme retained 44% activity at 50°C up to 2 h. The protease showed good hydrolysis specificity with different substrates tested. The presence of Mn2+, Co2+ and ethylenediaminetetracetic acid (EDTA) showed profound increase in protease activity. The protease of Bacillus species Y showed excellent stability and compatibility with three locally available detergents (Kite, Tide and Aerial) up to 3 h retaining almost 70–80% activity and 10–20% activity at room temperature (30°C) and 50°C, respectively, indicating the potential role of this enzyme for detergent application.  相似文献   

5.
The Bank Cormorant Phalacrocorax neglectus is endemic to the Benguela upwelling ecosystem off southwest Africa and is classified as Endangered owing to a recent large reduction in its number. It is thought that food scarcity, including a decreased abundance of West Coast rock lobster Jasus lalandii, has been a major driver of the decrease, yet its diet in South Africa is poorly known. We collected 941 pellets regurgitated by Bank Cormorants, at 18 South African breeding colonies during 1975–1985, and 1 523 pellets at 17 colonies during 1995–2002. The species composition of the diet (% numbers) was significantly different between the two periods, with widespread decreases in proportions of rock lobster in the west and of octopus and cuttlefish Sepia spp. at most localities. These taxa were replaced in the diet by fish, including Gobiidae and Clinidae. The pelagic goby Sufflogobius bibarbatus, an important prey of Bank Cormorants in Namibia, was absent from pellets collected in 1975–1985 but common at northern localities from 1995–2002. Composition of the diet by frequency of occurrence was only determined for 1995–2002, when rock lobster was present in 67% of all samples collected, cuttlefish in 39%, and Clinidae in 32%. Data for 1975–1985 and 1995–2002 showed that carapace lengths of rock lobsters eaten by Bank Cormorants averaged 56 mm (range 22–82 mm) and 50 mm (range 22–75 mm), respectively, which compares to the minimum legal size of 75 mm for fisheries in South Africa. This energy- rich prey item was an important constituent of the diet in the winter breeding period.  相似文献   

6.
The specific communities of spiders and carabid beetles of island salt marsh habitats of the East Frisian Island chain at the German North Sea coast were investigated. During the vegetation periods of 1997 and 1998 three pitfall trapping transects were installed on the islands of Borkum and Wangerooge. Within the salt marshes, transects extended from 0 m to 175 m. Elevation gradients varied between 10 cm and 232 cm above MHT (mean high tide). On Borkum, 35 traps were exposed in two transects, on Wangerooge 25 traps were placed in one transect. Three to five elevations above MHT were investigated per transect, each one with five traps. Highest species numbers were recorded in the higher elevated salt marshes. In contrast, highest activity values were noticed in the medium elevated salt marshes. Within both groups, spiders and carabids, four communities were distinguished by indirect gradient analysis. Indicator species were assigned to the different communities that were mainly assorted to different elevations of the salt marshes. Thus, the communities of both taxa corresponded well to the vegetational formations. The importance of sea level rise for structuring the communities of salt marsh arthropods is discussed. Overall, still great uncertainties exist on how arthropod communities and salt marshes themselves will develop.  相似文献   

7.
For a long time in situ conservation has been the main approach used to protect Chilean plant diversity. However, due to the high level of endemism of its flora (50%) and an increasing human impact on wild areas, ex situ conservation has become an urgent requirement to avoid the extinction of plant populations and species. Since 2001, the Instituto de Investigaciones Agropecuarias (INIA), Chile, has been working in partnership with the Royal Botanic Gardens Kew, (Kew) through the Millennium Seed Bank Project (MSB) with the objective of conserving 20% of the Chilean flora as seeds in long-term storage. This seed conservation effort has focussed mainly on the endangered and endemic plants of the Chilean drylands. Towards the end of the first phase of the MSB some 1482 seed collections representing 850 species and subspecies have been collected and safely preserved in the INIA Seed Base Bank and duplicated at Kew. Almost 70% of the total species collected are endemic to Chile and several of them are endangered. Additionally, seed germination research has been conducted for nearly 400 species and seed collections have been used to propagate several threatened species. Germination protocols have been published and disseminated online. Over 4,500 herbarium vouchers have been collected, largely duplicated at Kew and at the national herbarium in Chile. As a result of the inputs of INIA and the MSB, collaboration has been extended to other national stakeholders, mainly for plant taxonomy and seed collecting. In this context two training courses have been run for 70 staff/students. This training has contributed to the raising of general awareness of the need for the long-term protection of Chilean plant diversity and to demonstrate the key role that ex situ seed conservation can play in meeting this need.  相似文献   

8.
9.
J. Cooper 《Ostrich》2013,84(4):208-215
Cooper, J. 1981. Biology of the Bank Cormorant, Part 1: Distribution, population size, movements and conservation. Ostrich 52: 208–215.

The Bank Cormorant Phalacrocorax neglectus is a marine species, endemic to southern Africa. Its non-breeding range extends from Walvis Bay to Cape Agulhas. Breeding range extends from Hollamsbird Island to Quoin Rock. Its distribution is broadly similar to that of kelp beds Ecklonia maxima. A total of 44 breeding localities supports approximately 18 000 adult birds; 12 800 (71%) occur on two islands (Ichaboe and Mercury) north of large kelp beds. Adult Bank Cormorants are resident but juveniles may disperse several hundred kilometres. The species is not considered to be seriously at risk to disturbance at most breeding localities. However, modern expansion of fishing activities may affect the very large populations of Ichaboe and Mercury Islands.  相似文献   

10.
In the framework of the R.V. Nautilus exploration programme, remotely operated vehicle (ROV) surveys were conducted at bathyal depths in the Gorringe Bank. Video transects revealed the presence of the chimaerids Chimaera opalescens and Hydrolagus affinis in the region. An identification key for the north‐east Atlantic species of the family Chimaeridae is proposed.  相似文献   

11.
Spawning aggregations of red hind Epinephelus guttatus, tiger grouper Mycteroperca tigris and yellowfin grouper Mycteroperca venenosa were identified at two coral‐reef systems: Arrecife Alacranes (emergent bank reef) and Bajos del Norte (submerged bank reef) on the continental shelf of the Yucatan Peninsula (Campeche Bank), Mexico. At both reefs, E. guttatus forms large spawning aggregations between February and March. At Bajos del Norte, M. tigris reproduces in a small, low‐density aggregation in May, while M. venenosa aggregates at high densities for spawning between March and May. Multi‐species use of an aggregation site by E. guttatus and M. venenosa was observed at Bajos del Norte. The identified spawning aggregations are apparently stable in location over time, and all three species were commonly observed to spawn within 1 week following the full moon. Development and survival of the larvae spawned in these aggregations are probably aided by a seasonal (spring–summer) upwelling in the north‐east Campeche Bank. A permanent area closure at Bajos del Norte, currently outside any specific fisheries management area or regulations, would provide protection needed for the spawning aggregations of these three species.  相似文献   

12.
Discriminant function analyses of infection parameters of parasitic helminths revealed that abundances of seven helminth species contributed significantly to the delineation of four host populations of winter flounder Pleuronectes americanus from the central and south‐west Scotian Shelf and the north‐east Gulf of Maine (NAFO subdivision 4WX‐5Z). These were adult digeneans, Derogenes varicus , Genolinea laticauda , Steganoderma formosum and Steringophorus furciger , metacercariae of the digenean, Stephanostomum baccatum , and larval nematodes, Anisakis simplex and Hysterothylacium aduncum . The correct classification rate was 84% overall, with Georges Bank (5Z) and Sable Island Bank (4W) winter flounder being the most accurately classified samples at 98 and 88%, respectively. Winter flounder from south‐west Nova Scotia (4X), an inshore sample from St Marys Bay and offshore fish from Browns Bank, had the lowest rates of correct classification (76 and 71%, respectively) due, primarily, to cross‐misclassification between the two samples. Winter pairwise comparisons of four microsatellite markers identified significant genetic differences between all populations sampled with the Georges Bank population being the most genetically distinct overall, and St Marys Bay and Browns Bank fish being the least dissimilar.  相似文献   

13.
I. Preciado    J. E. Cartes    A. Serrano    F. Velasco    I. Olaso    F. Sánchez    I. Frutos 《Journal of fish biology》2009,75(6):1331-1355
The feeding habits of birdbeak dogfish Deania calcea, velvet belly lantern shark Etmopterus spinax and blackmouth catshark Galeus melastomus at Le Danois Bank, Cantabrian Sea, south Bay of Biscay were studied in relation to their bathymetric distribution. Deep‐sea sharks were collected during two multidisciplinary surveys carried out in October 2003 and April 2004 at the Le Danois Bank. Two different habitats were defined: (1) the top of the bank, ranging from 454 to 642 m depth and covered by fine‐sand sediments with a low percentage of organic matter, and (2) the inner basin located between the bank and the Cantabrian Sea's continental shelf, at depths of 810–1048 m, which was characterized by a high proportion of silt and organic matter. Deania calcea was not present at the top of the bank but was abundant below 642 m, while E. spinax was abundant in the shallower top of the bank but was not found in the deeper inner basin. There was almost no bathymetric overlap between these two deep‐sea shark species. Galeus melastomus was found over the whole depth range. There seemed to be an ontogenetic segregation with depth for this species, however, since 80% of the specimens collected at the top of the bank were < 600 mm total length (LT) (mean 510 mm LT), whereas larger individuals (mean 620 mm LT) inhabited deeper zones. Galeus melastomus exhibited a significantly higher feeding intensity than both E. spinax at the top of the bank and D. calcea in the inner basin. Little dietary overlap between D. calcea and G. melastomus in the inner basin was found, with D. calcea being an ichthyophagous predator while the diet of G. melastomus at these depths was composed of a variety of meso‐bathypelagic shrimps (e.g. Acantephyra pelagica, Pasiphaea spp. and Sergia robusta), cephalopods and fishes. The diets of E. spinax and G. melastomus at the top of the bank showed a high dietary overlap of euphausiids, which represented the main prey taxa for both species. Euphausiids declined in abundance with depth which was reflected in the diet of G. melastomus. The cluster analysis of prey affinities among hauls depicted two major groups, corresponding to the two different habitats (top of the bank and inner basin). Redundancy analysis also indicated top–basin segregation, with euphausiids representing the main prey taxa at the top of the bank and bathypelagic shrimps in the inner basin. Euphausiids and Micromesistius poutassou were key prey within the Le Danois Bank ecosystem since they were positively selected by the three deep‐sea shark species. These results show that the feeding ecology of these predators in Le Danois Bank ecosystem is highly influenced by depth‐related variables, as a result of changes in prey availability. Overall results were analysed in relation to the deep‐sea Le Danois ecosystem structure and functioning.  相似文献   

14.
Molecular phylogenetic studies have shown that the characters of the reduced shell of the false limpets of the genus Siphonaria Sowerby I, 1823 are highly variable and often insufficient for species delimitation. The taxonomy and distribution of Siphonaria in the Indian Ocean are poorly known. We sampled Siphonaria in the Seychelles Bank to check the occurrence of recorded species using DNA sequences and to study the paths through which Siphonaria species have colonised the Seychelles Bank by reconstructing their phylogenetic relationships. Analyses of a dataset comprising 16 S rRNA gene sequences of 33 specimens from the Seychelles Bank and 300 additional Siphonaria sequences from other regions from GenBank with various methods for species delimitation resulted in 19–102 primary species hypotheses. Assemble Species by Automatic Partitioning provided a conservative estimate of the species number (42) in which several indisputable species were lumped. The results of Automatic Barcode Gap Discovery depended strongly on the assumed prior maximum intraspecific divergence, whereas the tree-based methods Generalised Mixed Yule Coalescent and Poisson Tree Processes resulted in high overestimates. The specimens from the Seychelles Bank represent three clades, belonging to the Siphonaria ‘atra’ group, the Siphonaria ‘normalis’ group and a possibly undescribed species recorded previously only from Hainan. At least two of the three species recorded from the Seychelles Bank came from the east, i.e., from the Coral Triangle in the Indo-Australian Archipelago, the region with the highest marine biodiversity worldwide. A major transport mechanism across the Indian Ocean was probably the South Equatorial Current.  相似文献   

15.
The Mexican Government decreed Chinchorro Bank reef as a Biosphere Reserve in 1996. The aim of this study was to evaluate the spatial and size-frequency distribution of Acropora spp. in order to provide further knowledge and tools to enhance management. A field survey was conducted, within six regions, to locate and measure Acropora patches in the reef lagoon. Density, colony size and living tissue cover of Acropora colonies were evaluated using the line-intercept transect technique, combining direct observations and video transects. The results showed that Acropora spp. was preferentially distributed in the southern regions; where cover and density were high. Based on these results and considering that Acropora spp. produces landscape heterogeneity, which in turn generates shelter for other species, including some of considerable economic importance, then at least the South East region should be considered as a key area for Acropora species conservation, and should be included in the Chinchorro Bank management plan.  相似文献   

16.
Although migration patterns for various life history stages of the chokka squid (Loligo reynaudii) have been previously presented, there has been limited comparison of spatial variation in biological parameters. Based on data from research surveys; size ranges of juveniles, subadults and adults on the Agulhas Bank were estimated and presented spatially. The bulk of the results appear to largely support the current acceptance of the life cycle with an annual pattern of squid hatching in the east, migrating westwards to offshore feeding grounds on the Central and Western Agulhas Bank and the west coast and subsequent return migration to the eastern inshore areas to spawn. The number of adult animals in deeper water, particularly in autumn in the central study area probably represents squid spawning in deeper waters and over a greater area than is currently targeted by the fishery. The distribution of life history stages and different feeding areas does not rule out the possibility that discrete populations of L. reynaudii with different biological characteristics inhabit the western and eastern regions of the Agulhas Bank. In this hypothesis, some mixing of the populations does occur but generally squid from the western Agulhas Bank may occur in smaller numbers, grow more slowly and mature at a larger size. Spawning occurs on the western portion of the Agulhas Bank, and juveniles grow and mature on the west coast and the central Agulhas Bank. Future research requirements include the elucidation of the age structure of chokka squid both spatially and temporally, and a comparison of the statolith chemistry and genetic characterisation between adults from different spawning areas across the Agulhas Bank.  相似文献   

17.
The endogenous Escherichia coli porin OmpF was crystallized as an accidental by‐product of our efforts to express, purify, and crystallize the E. coli integral membrane protein KdpD in the presence of foscholine‐12 (FC12). FC12 is widely used in membrane protein studies, but no crystal structure of a protein that was both purified and crystallized with this detergent has been reported in the Protein Data Bank. Crystallization screening for KdpD yielded two different crystals of contaminating protein OmpF. Here, we report two OmpF structures, the first membrane protein crystal structures for which extraction, purification, and crystallization were done exclusively with FC12. The first structure was refined in space group P21 with cell parameters a = 136.7 Å, b = 210.5 Å, c = 137 Å, and β = 100.5°, and the resolution of 3.8 Å. The second structure was solved at the resolution of 4.4 Å and was refined in the P321 space group, with unit cell parameters a = 215.5 Å, b = 215.5 Å, c = 137.5 Å, and γ = 120°. Both crystal forms show novel crystal packing, in which the building block is a tetrahedral arrangement of four trimers. Additionally, we discuss the use of FC12 for membrane protein crystallization and structure determination, as well as the problem of the OmpF contamination for membrane proteins overexpressed in E. coli.  相似文献   

18.
Mercury pollution presents a globally significant threat to human and ecosystem health. An important transformation in the mercury cycle is the conversion of inorganic mercury to methylmercury, a toxic substance that negatively affects neurological function and bioaccumulates in food chains. This transformation is primarily bacterially mediated, and sulfate-reducing bacteria (SRB) have been specifically implicated as key mercury methylators in lake and estuarine sediments. This study used phospholipid fatty acid (PLFA) analysis to investigate sediment microbial community composition at four abandoned mercury mine–impacted sites in the California Coast Range: the Abbott, Reed, Sulphur Bank, and Mt. Diablo mines. Differences in watershed and hydrology among these sites were related to differences in microbial community composition. The Abbott and Sulphur Bank mines had the highest levels of methylmercury. Floc (a type of precipitate that forms when acid mine drainage contacts lake or river water) and sediment samples differed in terms of several important environmental variables and microbial community composition, but did not have statistically different methylmercury concentrations. Quantification of PLFA biomarkers for SRB (10Mel6:0 for Desulfobacter and i17:1 for Desulfovibrio) revealed that Desulfobacter and Desulfovibrio organisms made up higher percentages of overall microbial biomass at the Sulphur Bank and Mt. Diablo mines than at the Abbott and Reed mines. Correlations between these SRB biomarker fatty acids and methylmercury concentrations suggest that Desulfobacter and Desulfovibrio organisms may contribute to methylmercury production in the Abbott, Reed, and Sulphur Bank mines but may not be important contributors to methylmercury in the Mt. Diablo Mine.  相似文献   

19.
Arundo donax L. has a high biomass production and a tendency toward community dominance in many habitats and thereby a tolerance to a wide range of environmental conditions. Therefore, the present study investigated the potentiality of A. donax to accumulate nutrients and trace metals in its biomass. Six main habitats (Nile Bank, Drain Bank, Canal Bank, Field Edges, Railways and Roadsides) were recognized. At each habitat, six quadrats (each 1 m2), distributed equally in two sites, were selected for growth measurements (e.g., density, shoot height, diameter, leaf area and biomass), plant and soil analyses. Plants from Nile, Canal and Drain Banks had the highest values of most growth measurements, while those from Railways and Roadsides had the lowest. Canal Bank plants accumulated the highest concentrations of P, Cu and Pb in their leaves; Zn in the stem; and Mg, Cd and Fe in the rhizome. The bioaccumulation factor (BF) of A. donax, for Cd, Fe, Mn and Zn, was greater than 1, while the translocation factor (TF) of most trace metals was less than unity in most habitats. In conclusion, A. donax showed morphological plasticity in response to habitat heterogeneity, and its growth was most vigorous in the riparian habitats. The high BF, as well as the significant positive correlations between trace metals, especially Cd, in soil and plant, renders A. donax a powerful phytoremediator.  相似文献   

20.
Losses due to postharvest decay may occur at any time during postharvest handling, from harvest to consumption affecting the produce quality and quantity. Accurate identification of the pathogen causing postharvest disease is essential to the selection of an appropriate disease control approach. Nine isolates of Fusarium recovered from orange fruit were identified as Fusarium solani. The fungus is involved with fruit decay. The obtained cultures were purified and grown on potato-dextrose agar (PDA), malt yeast agar (MYA), and Czapek's nutrient media (CNM) under light for identification. A pathogenicity test was carried out to fulfil Koch's postulates. The pathogen could only enter ripe orange fruit through wounds and cracks causing the rot disease. The identification of the fungal isolates was confirmed to be F. solani by DNA sequencing, which was 99 to 100% homologous to those deposited in the Gen- Bank. The identity of nine fungal isolates was confirmed to be F. solani by DNA sequencing of the internal transcribed spacer (ITS) rDNA region (GenBank Accession Nos. DQ486874 to DQ486881 and KC758879). To our knowledge, this is the first morphogenetic identification of F. solani isolated from orange fruit in Egypt.  相似文献   

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