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1.
The effect of freeze-thaw (FT) cycles on Arctic tundra soil bacterial community was studied in laboratory microcosms. FT-induced changes to the bacterial community were followed over a 60-day period by terminal restriction fragment length polymorphism (T-RFLP) profiles of amplified 16S rRNA genes and reverse transcribed 16S rRNA. The main phylotypes of the active, RNA-derived bacterial community were identified using clone analysis. Non-metric multidimensional scaling ordination of the T-RFLP profiles indicated some shifts in the bacterial communities after three to five FT cycles at −2, −5, and −10°C as analyzed both from the DNA and rRNA. The dominating T-RFLP peaks remained the same, however, and only slight variation was generally detected in the relative abundance of the main T-RF sizes of either DNA or rRNA. T-RFLP analysis coupled to clone analysis of reverse transcribed 16S rRNA indicated that the initial soil was dominated by members of Bacteroidetes, Acidobacteria, Alpha-, Beta-, and Gammaproteobacteria. The most notable change in the rRNA-derived bacterial community was a decrease in the relative abundance of a Betaproteobacteria-related phylotype after the FT cycles. This phylotype decreased, however, also in the control soil incubated at constant +5°C suggesting that the decrease was not directly related to FT sensitivity. The results indicate that FT caused only minor changes in the bacterial community structure.  相似文献   

2.
Herbivores impact nutrient availability and cycling, and the net effect of herbivory on soil nutrients is generally assumed to be positive in nutrient-rich environments and negative in nutrient-poor ones. This is, however, far from a uniform pattern, and there is a recognized need to investigate any interactive effects of herbivory and habitat fertility (i.e., plant C/N ratios) on soil nutrient availabilities. We determined long-term effects of reindeer on soil extractable nitrogen (N) and phosphorus (P) and their net mineralization rates along a fertility gradient of plant carbon (C) to N and P ratios in arctic tundra. Our results showed that reindeer had a positive effect on soil N in the more nutrient-poor sites and a negative effect on soil P in the more nutrient-rich sites, which contrasts from the general consensus. The increase in N availability was linked to a decrease in plant and litter C/N ratios, suggesting that a shift in vegetation composition toward more graminoids favors higher N cycling. Soil P availability was not as closely linked to the vegetation and is likely regulated more by herbivore-induced changes in soil physical and chemical properties. The changes in soil extractable N and P resulted in higher soil N/P ratios, suggesting that reindeer could drive the vegetation toward P-limitation. This research highlights the importance of including both the elements N and P and conducting studies along environmental gradients in order to better understand the interactive effects of herbivory and habitat fertility on nutrient cycling and primary production.  相似文献   

3.
气候变化导致长白山苔原由灌木苔原向灌草苔原演化,对土壤呼吸及碳循环造成了重要影响。为了明确植被变化对苔原土壤呼吸的影响,该研究选取了长白山苔原典型的群落,测定分析了不同草本植物盖度下的土壤呼吸的季节动态变化及差异。结果表明:(1)在生长季,3个群落下不同变化阶段样地的土壤呼吸速率均有明显的动态变化,均呈单峰型变化特征;草本植物盖度增加没有改变土壤呼吸的季节动态变化趋势。(2)草本植物盖度增加对土壤呼吸速率有显著影响,随着草本植物盖度的增加,土壤呼吸速率也逐渐增大。(3)不同植物群落下土壤呼吸不同,在草本植物盖度相同的条件下土壤呼吸速率依次为:牛皮杜鹃 小叶章群落>牛皮杜鹃 地榆群落>笃斯越桔 苔草群落。(4)不同群落草本植物盖度增加对土壤呼吸的增速效应不同,牛皮杜鹃 小叶章群落的土壤呼吸增速最快,笃斯越桔 苔草群落的次之,牛皮杜鹃 地榆群落最小;草本植物盖度的增加也使3个群落之间土壤呼吸的差值出现明显的变化。  相似文献   

4.
Protocols were developed to determine whether microbial metabolism limits the ultimate removal of contaminants from soil. Two soils were used: a creosote contaminated soil and a soil contaminated with crude oil. A laboratory-scale slurry-phase bioreactor was used to maximize the rate of desorption of components from the soil to the aqueous phase. The protocols to enhance the ultimate removal of hydrocarbons were as follows: stimulation of the bacterial cultures with either naphthalene or a mixture of anthracene and phenanthrene, the use of static conditions to enhance bacterial attachment to the nonaqueous phase liquids in the soil, and increased incubation temperature. Addition of the polycyclic aromatic hydrocarbon (PAH) compounds did not stimulate removal of individual target compounds, classes of compounds or total thermally extractable organics. A comparison of well-mixed and static culture conditions showed equivalent removal, except for the lightest PAH and petroleum fractions that were removed more under well-mixed conditions. Increasing the temperature to 30°C from 21°C gave more rapid initial removal of petroleum components, but the ultimate removal was unaffected. Removal of components from the creosote-contaminated soil was unaffected by temperature. These results suggest that desorption of contaminants from the soils limited the ultimate removal of contaminants, not the biological activity.  相似文献   

5.
In 1984, an underground storage tank leaked approximately 41,000 L of gasoline into the ground water at the Naval Construction Battalion Command in Port Hueneme, CA (USA). Benzene, toluene, ethylbenzene, and xylenes (BTEX) contamination stimulated remedial action. In 1995, a ground water circulation well (GCW) and network of surrounding monitoring wells were installed. After year of operation, dissolved oxygen and nitrate concentrations remained low in all monitoring wells. Benzene utilization (the sum of respiration, uptake, and conversion to polar compounds) ranged from 0.03 to 4.6 µg L-1 h-1, and toluene utilization ranged from 0.01 to 5.2 µg L-1 h-1. Heterotrophic bacterial productivity (total carbon assimilation) increased dramatically in the GCW, although benzene and toluene utilization decreased markedly relative to surrounding wells. Benzene and toluene uptake accounted for a significant proportion (mean=22%) of the heterotrophic bacterial productivity except within the GCW, indicating other fuel contaminant or indigenous organic carbon and not BTEX compounds served as primary carbon source. The GCW effectively air-stripped BTEX compounds, but failed to stimulate benzene and toluene biodegradation and thus would not be effective for stimulating BTEX bioremediation under current deployment parameters. Air stripping was three orders of magnitude more effective than biodegradation for removing benzene and toluene in the GCW.  相似文献   

6.
We used long-term laboratory incubations and chemical fractionation to characterize the mineralization dynamics of organic soils from tussock, shrub, and wet meadow tundra communities, to determine the relationship between soil organic matter (SOM) decomposition and chemistry, and to quantify the relative proportions of carbon (C) and nitrogen (N) in tundra SOM that are biologically available for decomposition. In all soils but shrub, we found little decline in respiration rates over 1 year, although soils respired approximately a tenth to a third of total soil C. The lack of decline in respiration rates despite large C losses indicates that the quantity of organic matter available was not controlling respiration and thus suggests that something else was limiting microbial activity. To determine the nature of the respired C, we analyzed soil chemistry before and after the incubation using a peat fractionation scheme. Despite the large losses of soil C, SOM chemistry was relatively unchanged after the incubation. The decomposition dynamics we observed suggest that tundra SOM, which is largely plant detritus, fits within existing concepts of the litter decay continuum. The lack of changes in organic matter chemistry indicates that this material had already decomposed to the point where the breakdown of labile constituents was tied to lignin decomposition. N mineralization was correlated with C mineralization in our study, but shrub soil mineralized more and tussock soil less N than would have been predicted by this correlation. Our results suggest that a large proportion of tundra SOM is potentially mineralizable, despite the fact that decomposition was dependent on lignin breakdown, and that the historical accumulation of organic matter in tundra soils is the result of field conditions unfavorable to decomposition and not the result of fundamental chemical limitations to decomposition. Our study also suggests that the anticipated increases in shrub dominance may substantially alter the dynamics of SOM decomposition in the tundra. Received 31 January 2002; accepted 16 July 2002.  相似文献   

7.
The Arctic is experiencing rapid vegetation changes, such as shrub and tree line expansion, due to climate warming, as well as increased wetland variability due to hydrological changes associated with permafrost thawing. These changes are of global concern because changes in vegetation may increase tundra soil biogeochemical processes that would significantly enhance atmospheric CO2 concentrations. Predicting the latter will at least partly depend on knowing the structure, functional activities, and distributions of soil microbes among the vegetation types across Arctic landscapes. Here we investigated the bacterial and microeukaryotic community structures in soils from the four principal low Arctic tundra vegetation types: wet sedge, birch hummock, tall birch, and dry heath. Sequencing of rRNA gene fragments indicated that the wet sedge and tall birch communities differed significantly from each other and from those associated with the other two dominant vegetation types. Distinct microbial communities were associated with soil pH, ammonium concentration, carbon/nitrogen (C/N) ratio, and moisture content. In soils with similar moisture contents and pHs (excluding wet sedge), bacterial, fungal, and total eukaryotic communities were correlated with the ammonium concentration, dissolved organic nitrogen (DON) content, and C/N ratio. Operational taxonomic unit (OTU) richness, Faith''s phylogenetic diversity, and the Shannon species-level index (H′) were generally lower in the tall birch soil than in soil from the other vegetation types, with pH being strongly correlated with bacterial richness and Faith''s phylogenetic diversity. Together, these results suggest that Arctic soil feedback responses to climate change will be vegetation specific not just because of distinctive substrates and environmental characteristics but also, potentially, because of inherent differences in microbial community structure.  相似文献   

8.
A crude biosurfactant solution was produced by Pseudomonas aeruginosa growing on agroindustrial wastes as the substrate and used to study its effect on hydrocarbon biodegradation by the indigenous soil microflora under laboratory conditions. Two concentrations were studied at first and 1 mg of biosurfactant/g of soil showed to be the most efficient for the total petroleum hydrocarbon reduction, which reached 85% at the first 20 days in soil microcosms. Respirometric and microbial analyses showed that the biosurfactant added did not have toxic effects over the microbial population. The use of a biosurfactant for bioremediation has been limited because of its high cost production. Biosurfactants produced from cost-free by-products combines waste minimization with economic potential bioremediation process.  相似文献   

9.
10.
Our understanding of the controls and magnitudes of regional CO2 exchanges in the Arctic are limited by uncertainties due to spatial heterogeneity in vegetation across the landscape and temporal variation in environmental conditions through the seasons. We measured daytime net ecosystem CO2 exchange and each of its component fluxes in the three major tundra ecosystem-types that typically occur along natural moisture gradients in the Canadian Low Arctic biweekly during the full snow-free season of 2004. In addition, we used a plant-removal treatment to compare the contribution of bulk soil organic matter to total respiratory CO2 loss among these ecosystems. Net CO2 exchange rates varied strongly, but not consistently, among ecosystems in the spring and summer phases as a result of ecosystem-specific and differing responses of gross photosynthesis and respiration to temporal variation in environmental conditions. Overall, net carbon gain was largest in the wet sedge ecosystem and smallest in the dry heath. Our measures of CO2 flux variation within each ecosystem were frequently most closely correlated with air or soil temperatures during each seasonal phase. Nevertheless, a particularly large rainfall event in early August rapidly decreased respiration rates and stimulated gross photosynthetic rates, resulting in peak rates of net carbon gain in all ecosystems. Finally, the bulk soil carbon contribution to total respiration was relatively high in the birch hummock ecosystem. Together, these results demonstrate that the relative influences of moisture and temperature as primary controls on daytime net ecosystem CO2 exchange and its component fluxes differ in fundamental ways between the landscape and ecosystem scales. Furthermore, they strongly suggest that carbon cycling responses to environmental change are likely to be highly ecosystem-specific, and thus to vary substantially across the low arctic landscape. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.  相似文献   

11.
12.
In the bioremediation of low-permeability soils, pollutant and, especially, the oxygen bioavailability are often the rate limiting steps. In cases when a biopile treatment can represent an applicable technique, pretreatment of the excavated soil is often necessary to attain an adequate air-filled porosity in the soil and to avoid the presence of large soil aggregates. The present work was performed to evaluate the influence of soil aggregate size in the bioremediation of a silt-clay type soil contaminated by PAHs. Microcosms were arranged with spherical soil aggregates of different diameter in near water-saturation conditions. Concentration of two and three aromatic ring PAHs, total biom-ass, and respiration rates were monitored. PAH concentration profiles inside the particles were also obtained. A simple and quick way to estimate the critical dimension of the soil aggregates was developed based on the evaluation of an oxygen penetration depth, that is, the distance from the external surface to the aggregate core beyond which oxygen concentration is practically zero. A very different time course of PAHs consumption was found in the external layer and the inner core of the aggregates as well as in aggregates of different dimensions. The results suggest that only the 3 mm external layer of the sphere is not limited by oxygen diffusion.  相似文献   

13.
The biodegradability of seven different crude oils was found to be highly dependent on their composition and on incubation temperature. At 20 C lighter oils had greater abiotic losses and were more susceptible to biodegradation than heavier oils. These light crude oils, however, possessed toxic volatile components which evaporated only slowly and inhibited microbial degradation of these oils at 10 C. No volatile toxic fraction was associated with the heavier oils tested. Rates of oil mineralization for the heavier oils were significantly lower at 20 C than for the lighter ones. Similar relative degradation rates were found with a mixed microbial community, using CO2 evolution as the measure, and with a Pseudomonas isolate from the Arctic, using O2 consumption as the measure. The paraffinic, aromatic, and asphaltic fractions were subject to biodegradation. Some preference was shown for paraffin degradation, especially at low temperatures. Branched paraffins, such as pristane, were degraded at both 10 and 20 C. At best, a 20% residue still remained after 42 days of incubation. Oil residues generally had a lower relative percentage of paraffins and higher percentage of asphaltics than fresh or weathered oil.  相似文献   

14.
We investigated multivariate relationships among snowmelt, soil physicochemical properties and the distribution patterns of Arctic tundra vegetation. Seven dominant species were placed in three groups (Veg-1, 2, 3) based on niche overlap (Pianka’s Index) and ordination method, and a partial least squares path model was applied to estimate complex multivariate relationships of four latent variables on the abundance and richness of plant species. The abundance of Veg-1 (Luzula confusa and Salix polaris) was positively correlated with early snowmelt time, high soil nutrients and dense moss cover, but the abundance of Veg-2 (Saxifraga oppositifolia, Bistorta vivipara and Silene acaulis) was negatively correlated with these three variables. Plant richness was positively associated with early snowmelt and hydrological properties. Our results indicate that the duration of the snowpack can directly influence soil chemical properties and plant distribution. Furthermore, plant species richness was significantly affected by snow melt time in addition to soil moisture and moss cover. We predict that L. confusa and S. polaris may increase in abundance in response to early snowmelt and increased soil moisture-nutrient availability, which may be facilitated by climate change. Other forb species in dry and infertile soil may decrease in abundance in response to climate change, due to increasingly unfavourable environmental conditions and competition with mosses.  相似文献   

15.
Epstein-Barr virus (EBV) transformed lymphoblastoid cell lines (LCLs) are a widely used renewable resource for functional genomic studies in humans. The ability to accumulate multidimensional data pertaining to the same individual cell lines, from complete genomic sequences to detailed gene regulatory profiles, further enhances the utility of LCLs as a model system. However, the extent to which LCLs are a faithful model system is relatively unknown. We have previously shown that gene expression profiles of newly established LCLs maintain a strong individual component. Here, we extend our study to investigate the effect of freeze-thaw cycles on gene expression patterns in mature LCLs, especially in the context of inter-individual variation in gene expression. We report a profound difference in the gene expression profiles of newly established and mature LCLs. Once newly established LCLs undergo a freeze-thaw cycle, the individual specific gene expression signatures become much less pronounced as the gene expression levels in LCLs from different individuals converge to a more uniform profile, which reflects a mature transformed B cell phenotype. We found that previously identified eQTLs are enriched among the relatively few genes whose regulations in mature LCLs maintain marked individual signatures. We thus conclude that while insight drawn from gene regulatory studies in mature LCLs may generally not be affected by the artificial nature of the LCL model system, many aspects of primary B cell biology cannot be observed and studied in mature LCL cultures.  相似文献   

16.
Freeze-thaw events can affect plant hydraulics by inducing embolism. This study analyzed the effect of temperature during the freezing process on hydraulic conductivity and ultrasonic emissions (UE). Stems of 10 angiosperms were dehydrated to a water potential at 12% percentage loss of hydraulic conductivity (PLC) and exposed to freeze-thaw cycles. The minimal temperature of the frost cycle correlated positively with induced PLC, whereby species with wider conduits (hydraulic diameter) showed higher freeze-thaw-induced PLC. Ultrasonic activity started with the onset of freezing and increased with decreasing subzero temperatures, whereas no UE were recorded during thawing. The temperature at which 50% of UE were reached varied between −9.1°C and −31.0°C across species. These findings indicate that temperatures during freezing are of relevance for bubble formation and air seeding. We suggest that species-specific cavitation thresholds are reached during freezing due to the temperature-dependent decrease of water potential in the ice, while bubble expansion and the resulting PLC occur during thawing. UE analysis can be used to monitor the cavitation process and estimate freeze-thaw-induced PLC.Xylem embolism is a limiting factor for plant survival and distribution (Choat et al., 2012; Charrier et al., 2013). Two major factors can induce embolism in the xylem of plants: drought and freeze stress. Freeze-thaw-induced embolism is caused by bubbles formed during freezing that then expand on thawing (Lemoine et al., 1999; Hacke and Sperry, 2001; Cruiziat et al., 2002; Tyree and Zimmermann, 2002). As wider conduits contain more gas and form larger bubbles, which expand at less negative tension, conduit diameter and xylem sap tension are critical for the formation of freeze-thaw-induced embolism (Davis et al., 1999; Pittermann and Sperry, 2003). Accordingly, Mayr and Sperry (2010) observed a loss of conductivity only when samples were under critical tension during thawing. Under drought stress, tension in the xylem sap increases the sensitivity to embolism generated by successive freeze-thaw cycles (Mayr et al., 2003, 2007).Ultrasonic emissions (UE) analysis can be used to detect cavitation events in wood. It is unclear how well related UE are to cavitation events, as they are extracted from continuous acoustic emissions and depend on set definitions. However, UE analysis has been proven effective for monitoring drought-induced embolism in the laboratory (Pena and Grace, 1986; Salleo and Lo Gullo, 1986; Borghetti et al., 1993; Salleo et al., 2000) as well as in field experiments (Ikeda and Ohtsu, 1992; Jackson et al., 1995; Jackson and Grace, 1996; Hölttä et al., 2005; Ogaya and Penuelas, 2007). In a cavitating conduit, signals are probably produced by the disruption of the water column and subsequent tension relaxation of cell walls.UE have also been detected during freezing events, but the origin of these signals was less clear. In some cases, UE were observed during thawing, which are thus probably related to embolism formation according to the classic thaw-expansion hypothesis (Mayr and Sperry, 2010); however, all species studied have produced UE on freezing, which cannot yet be explained (Raschi et al., 1989; Kikuta and Richter, 2003; Mayr et al., 2007; Mayr and Sperry, 2010; Mayr and Zublasing, 2010). The low solubility of gases in ice prompted the idea that air bubbles expulsed from the ice structure produce UE near the ice-liquid interface (Sevanto et al., 2012). As the water potential of ice is strongly temperature dependent, the minimum temperature during freezing might be a relevant factor. Numerous studies have analyzed UE patterns during freeze-thaw cycles in conifers (Mayr et al., 2007; Mayr and Sperry, 2010; Mayr and Zublasing, 2010) or angiosperms (Weiser and Wallner, 1988; Kikuta and Richter, 2003), but few of them measured embolism concomitantly. Percentage loss of hydraulic conductivity (PLC) was only measured in a few studies and only in conifers (Mayr et al., 2007; Mayr and Sperry, 2010).In this study, we analyzed the effect of freeze-thaw cycles on the hydraulic conductivity and ultrasonic activity in 10 angiosperm species. We hypothesized that (1) the extent of freeze-thaw-induced embolism depends on xylem anatomy (related to conduit diameter) and minimal temperature (related to the water potential of ice); (2) ultrasonic activity is also influenced by anatomy and temperature; and (3) PLC and UE are positively correlated. PLC was measured in 10 angiosperm species after freeze-thaw cycles at different minimal temperatures (−10 to −40°C). Furthermore, UE were recorded during a freeze-thaw cycle down to −40°C.  相似文献   

17.
Releases of the greenhouse gases carbon dioxide (CO2) and methane (CH4) from thawing permafrost are expected to be among the largest feedbacks to climate from arctic ecosystems. However, the current net carbon (C) balance of terrestrial arctic ecosystems is unknown. Recent studies suggest that these ecosystems are sources, sinks, or approximately in balance at present. This uncertainty arises because there are few long-term continuous measurements of arctic tundra CO2 fluxes over the full annual cycle. Here, we describe a pattern of CO2 loss based on the longest continuous record of direct measurements of CO2 fluxes in the Alaskan Arctic, from two representative tundra ecosystems, wet sedge and heath tundra. We also report on a shorter time series of continuous measurements from a third ecosystem, tussock tundra. The amount of CO2 loss from both heath and wet sedge ecosystems was related to the timing of freeze-up of the soil active layer in the fall. Wet sedge tundra lost the most CO2 during the anomalously warm autumn periods of September–December 2013–2015, with CH4 emissions contributing little to the overall C budget. Losses of C translated to approximately 4.1 and 1.4% of the total soil C stocks in active layer of the wet sedge and heath tundra, respectively, from 2008 to 2015. Increases in air temperature and soil temperatures at all depths may trigger a new trajectory of CO2 release, which will be a significant feedback to further warming if it is representative of larger areas of the Arctic.  相似文献   

18.
19.
Abstract. Significant levels of nitrogenase activity (nitrogen fixation) were demonstrated in three species of Arctic legumes ( Oxytropis maydelliana, O. arctobia and Astragalus alpinus ) growing in high tundra at Sarcpa Lake, Melville Peninsula, N.W.T. Nitrogenase activity of intact plants was correlated with the number of nodules per plant, with field soil temperatures and limited by water shortage. Activity in freshly detached nodules showed a plateau of maximum activity between 10°C and 25°C and a near linear decline with temperature down to 0°C. Unusually, the segmented nodules of all three species are perennial in which growth and leghaemoglobin production resumes each spring from an overwintering apical meristem. Nodules are most numerous in the warmer soil stratum (2–10 cm. depth). Other studies indicate that the arctic rhizobia belong to a single cold-adapted species which has co-evolved with the legumes of tundra.  相似文献   

20.
The role that neutrophilic iron-oxidizing bacteria play in the Arctic tundra is unknown. This study surveyed chemosynthetic iron-oxidizing communities at the North Slope of Alaska near Toolik Field Station (TFS) at Toolik Lake (lat 68.63, long −149.60). Microbial iron mats were common in submerged habitats with stationary or slowly flowing water, and their greatest areal extent is in coating plant stems and sediments in wet sedge meadows. Some Fe-oxidizing bacteria (FeOB) produce easily recognized sheath or stalk morphotypes that were present and dominant in all the mats we observed. The cool water temperatures (9 to 11°C) and reduced pH (5.0 to 6.6) at all sites kinetically favor microbial iron oxidation. A microbial survey of five sites based on 16S rRNA genes found a predominance of Proteobacteria, with Betaproteobacteria and members of the family Comamonadaceae being the most prevalent operational taxonomic units (OTUs). In relative abundance, clades of lithotrophic FeOB composed 5 to 10% of the communities. OTUs related to cyanobacteria and chloroplasts accounted for 3 to 25% of the communities. Oxygen profiles showed evidence for oxygenic photosynthesis at the surface of some mats, indicating the coexistence of photosynthetic and FeOB populations. The relative abundance of OTUs belonging to putative Fe-reducing bacteria (FeRB) averaged around 11% in the sampled iron mats. Mats incubated anaerobically with 10 mM acetate rapidly initiated Fe reduction, indicating that active iron cycling is likely. The prevalence of iron mats on the tundra might impact the carbon cycle through lithoautotrophic chemosynthesis, anaerobic respiration of organic carbon coupled to iron reduction, and the suppression of methanogenesis, and it potentially influences phosphorus dynamics through the adsorption of phosphorus to iron oxides.  相似文献   

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