Microbial carbonates and corals on the marginal French Jura platform (Late Oxfordian,Molinges section)

Molinges was located on an Upper Jurassic ramp system of low-energy regime that developed at the southern margin of the French Jura platform. The sedimentary succession is characterized by the transition from a mixed siliciclastic-carbonate to a carbonate depositional setting that occurred during a long-term shallowing-upward trend. The disappearance of siliciclastics is explained by a climatic change, from humid and cold to drier and warmer conditions, previously identified in Late Oxfordian adjacent basins. The base of the section shows marl-limestone alternations of outer ramp. In its middle part, the section displays oncolitic marls, coral-microbialite beds and oncolitic limestones that deposited in a mid ramp position. Finally, the upper section part is made of oolitic limestones of inner ramp. In outer- to mid-ramp settings submitted to terrigenous inputs, the stacking pattern of deposits and facies evolution allow the identification of elementary, small-, medium-, and large-scale sequences. Small amplitudes of sea-level variations probably controlled rapid shifts of facies belts and reef window occurrences. In small-scale sequences, the coral beds developed during periods of sea-level rise. The decreasing rate of sea-level rise is marked by the downramp shift of the oncolitic limestone belt that led to the demise of coral-microbialite beds. These bioconstructions are mainly represented by thin biostromes in which corals never reach great sizes. The coral assemblages mainly include the genera Enallhelia, Dimorpharaea, Thamnasteria, and some solitary forms (Montlivaltia and Epistreptophyllum). They suggest relatively low-mesotrophic conditions in marine waters during the edification of the primary framework. Relatively cold water temperatures and periods of more elevated nutrient contents are probably responsible of the reduced coral development and the formation of a large amount of microbialites.     

Reefal and mud mound facies development in the Lower Devonian La Vid Group at the Colle outcrops (León province, Cantabrian Zone, NW Spain)

In the locality of Colle (Cantabrian Zone, NW Spain), the upper part of the Valporquero Shale Formation (Emsian, La Vid Group) contains an interval of shales and marlstones (barren, greenish-grey shales and fossiliferous, greenish-grey or reddish shales/marlstones) with beds and packages of homogeneous and cross-bedded skeletal limestones. Metre-scale mud mounds and coral biostromes occur encased in the fossiliferous reddish and greenish-grey shale/marlstones, respectively, with the coral biostromes overlying conspicuous skeletal limestone bodies. These rocks were deposited on a carbonate ramp, ranging from above storm wave base for the cross-bedded skeletal limestones to below the storm wave base for the remaining deposits, organic buildups included. The vertical stacking of these facies and the occurrence of the two types of buildups are interpreted to reflect the interplay among several (possibly 4th and 5th) orders of relative sea-level variations, during a 3rd-order highstand. Coral biostromes occur in early 5th-order transgressive system tracts developed within late 4th-order highstand, and are interpreted to have thrived on a stable granular substrate (skeletal limestones) in non-turbid waters, being later aborted by the onset of muddy sedimentation. Biostrome features suggest that they developed under environmental conditions essentially different from those related to the sedimentation of their granular substrate. Mud mounds occur in 5th-order transgressive and early highstand system tracts tied to early 4th-order sea-level rise. Field relationships suggest that mud mounds grew coevally with muddy sedimentation, with high-frequency variations in carbonate vs. terrigenous mud sedimentation influencing their development.An erratum to this article can be found at     

Coral-rudist bioconstructions in the Upper Cretaceous Haidach section (Gosau Group; Northern Calcareous Alps, Austria)

Summary In the area of Haidach (Northern Calcareous Alps, Austria), coral-rudist mounds, rudist biostromes, and bioclastic limestones and marls constitute an Upper Cretaceous shelf succession approximately 100 meters thick. The succession is part of the mixed siliciclasticcarbonate Gosau Group that was deposited at the northern margin of the Austroalpine microplate. In its lower part, the carbonate succession at Haidach comprises two stratal packages that each consists, from bottom to top, of a coral-rudist mound capped by a rudist biostrome which, in turn, is overlain by bioclastic limestones and, locally, marls. The coral-rudist mounds consist mainly of floatstones. The coral assemblage is dominated by Fungiina, Astreoina, Heterocoeniina andAgathelia asperella (stylinina). From the rudists, elevators (Vaccinites spp., radiolitids) and recumbents (Plagioptychus) are present. Calcareous sponges, sclerosponges, and octocorals are subordinate. The elevator rudists commonly are small; they settled on branched corals, coral heads, on rudists, and on biolastic debris. The rudists, in turn, provided settlement sites for corals. Predominantly plocoid and thamnasteroid coral growth forms indicate soft substrata and high sedimentation rates. The mounds were episodically smothered by carbonate mud. Many corals and rudists are coated by thick and diverse encrustations that indicate high nutrient level and/or turbid waters. The coral-rudist mounds are capped byVaccinites biostromes up to 5 m thick. The establishment of these biostromes may result from unfavourable environmental conditions for corals, coupled with the potential of the elevator rudists for effective substrate colonization. TheVaccinites biostromes are locally topped by a thin radiolitid biostrome. The biostromes, in turn, are overlain by bioclastic limestones; these are arranged in stratal packages that were deposited from carbonate sand bodies. Approximately midsection, an interval of marls with abundantPhelopteria is present. These marls were deposited in a quiet lagoonal area where meadows of sea grass or algae, coupled with an elevated nutrient level, triggered the mass occurrence ofPhelopteria. The upper part of the Haidach section consists of stratal packages that each is composed of a rudist biostrome overlain by bioclastic wackestones to packstones with diverse smaller benthic foraminifera and calcareous green algae. The biostromes are either built by radiolitids,Vaccinites, andPleurocora, or consist exclusively of radiolitids (mainlyRadiolites). Both the biostromes and the bioclastic limestones were deposited in a low-energy lagoonal environment that was punctuated by high-energy events.In situ-rudist fabrics typically have a matrix of mudstone to rudistclastic wackestone; other biogens (incl. smaller benthic foraminifera) are absent or very rare. The matrix of rudist fabrics that indicate episodic destruction by high-energy events contain a fossil assemblage similar to the vertically associated bioclastic limestones. Substrata colonized by rudists thus were unfavourable at least for smaller benthic foraminifera. The described succession was deposited on a gently inclined shelf segment, where coral-rudist mounds and hippuritid biostromes were separated by a belt of bioclastic sand bodies from a lagoon with radiolitid biostromes. The mounds document that corals and Late Cretaceous elevator rudists may co-occur in close association. On the scale of the entire succession, however, mainly as a result of the wide ecologic range of the rudists relative to corals, the coral-dominated mounds and the rudist biostromes are vertically separated.     

Habitats of colonial rugose corals: the Mississippian of western Europe as example for a general classification

Aretz, M. 2010: Habitats of colonial rugose corals: the Mississippian of western Europe as example for a general classification. Lethaia, DOI: 10.1111/j.1502‐3931.2010.00218.x. Colonial rugose corals are a major constituent of shallow‐water marine benthic communities in Mississippian times. The study of western European rugose coral habitats from the base of the Tournaisian stage to the Serpukhovian stage allows the recognition of four basic habitat types, which can be divided into a total of 11 subtypes. The classification is mainly based on field data, and thus rapidly applicable. Level‐bottom communities in which large colony distances are characteristic (type A) represent the most basic community type; polyspecific (subtype A1) and monospecific (subtype A2) subtypes occur. Reduced colony distances result in the formation of coral meadows (type B), which either show homogenous coral distribution (subtype B1) or the development of patches (subtype B2). Coral biostromes (type C) represent a spectrum between hydrodynamically controlled biostromes (nothing in place, subtype C1) and biologically constructed and controlled biostromes (subtype C2). The bulk of the biostromes represent mixtures of those two subtypes (subtype C3). Colonial rugose corals are widely encountered in Mississippian bioherms where they are dwellers (subtype D1), form capping beds (subtype D2), support framework building along with other organisms (subtype D3) and form coral framework (subtype D4). The latter is probably the most uncommon of all subtypes in Mississippian times. The classification is widely applicable to other groups. □Classification, habitats, Mississippian, palaeoecology, palaeoenvironment, rugose corals.     

Global change and coral reefs: impacts on reefs, economies and human cultures

Coral reefs have reconstituted themselves after previous large sea-level variations, and climate changes. For the past 6000 years of unusually stable sea-level, reefs have grown without serious interruptions. During recent decades, however, new stresses threaten localized devastation of many reefs. A new period of global climate change is occurring, stimulated by anthropogenic increases in greenhouse gases. Coral reefs will cope well with predicted sea-level rises of 4.5 cm per decade, but reef islands will not. Higher sea levels will provide corals with greater room for growth across reef flats, but there are no foreseeable mechanisms for reef island growth to keep pace with sea-level rise, therefore many low islands may ultimately become uninhabitable. Climate change will introduce localized variations in weather patterns, but changes to individual reefs cannot be predicted. Reefs on average should cope well with regional climate change, as they have coped with similar previous fluctuations. Air temperature increases of 0.2–0.3 °C/decade will induce slower increases in sea-surface temperatures, which may cause localized, or regional increases in coral bleaching. Changes in rainfall will impact on reefs near land masses. Likewise, increased storms and variations in El Nino Southern Oscillation (ENSO) may stress some reefs, but not others. The greatest impact of climate change will be a synergistic enhancement of direct anthropogenic stresses (excessive sediment and pollution from the land; over-fishing, especially via destructive methods; mining of coral rock and sand; and engineering modifications), which currently cause most damage to coral reefs. Many of the world's reefs have been degraded and more will be damaged as anthropogenic impacts increase under the ‘demophoric’ increases in population (demos) and economic (phoric) activity. This biotic and habitat loss will result in severe economic and social losses. Reefs, however, have considerable recovery powers and losses can be minimized by effective management of direct human impacts and reducing indirect threats of global climate change.     

Tectonic subsidence provides insight into possible coral reef futures under rapid sea-level rise

Sea-level rise will change environmental conditions on coral reef flats, which comprise extensive habitats in shallow tropical seas and support a wealth of ecosystem services. Rapid relative sea-level rise of 0.6 m over a relatively pristine coral reef in Solomon Islands, caused by a subduction earthquake in April 2007, generated a unique opportunity to examine in situ coral reef response to relative sea-level rise of the magnitude (but not the rate) anticipated by 2100. Extent of live coral was measured from satellite imagery in 2003, 2006, 2009 and 2012. Ecological data were obtained from microatolls and ecological surveys in May 2013. The reef was sampled at 12 locations where dense live hard coral remained absent, remained present or changed from absent to present following subsidence. Ecological data (substratum depth, live coral canopy depth, coral canopy height, substratum suitability, recruitment, diversity and Acropora presence) were measured at each location to identify factors associated with coral response to relative sea-level rise. Vertical and horizontal proliferation of coral occurred following subsidence. Lateral expansion of live coral, accomplished primarily by branching Acropora spp., resulted in lower diversity in regions which changed composition from pavement to dense live coral following subsidence. Of the ecological factors measured, biotic factors were more influential than abiotic factors; species identity was the most important factor in determining which regions of the reef responded to rapid sea-level rise. On relatively pristine reef flats under present climatic conditions, rapid relative sea-level rise generated an opportunity for hard coral to proliferate. However, the species assemblage of the existing reef was important in determining response to sea-level change, by providing previously bare substrate with a source of new coral colonies. Degraded reefs with altered species composition and slower coral growth rates may be less able to respond to climate change-induced sea-level changes.     

The coral probiotic hypothesis

Emerging diseases have been responsible for the death of about 30% of corals worldwide during the last 30 years. Coral biologists have predicted that by 2050 most of the world's coral reefs will be destroyed. This prediction is based on the assumption that corals can not adapt rapidly enough to environmental stress-related conditions and emerging diseases. Our recent studies of the Vibrio shiloi/Oculina patagonica model system of the coral bleaching disease indicate that corals can indeed adapt rapidly to changing environmental conditions by altering their population of symbiotic bacteria. These studies have led us to propose the Coral Probiotic Hypothesis. This hypothesis posits that a dynamic relationship exists between symbiotic microorganisms and environmental conditions which brings about the selection of the most advantageous coral holobiont. Changing their microbial partners would allow the corals to adapt to changing environmental conditions more rapidly (days to weeks) than via mutation and selection (many years). An important outcome of the Probiotic Hypothesis would be development of resistance of the coral holobiont to diseases. The following evidence supports this hypothesis: (i) Corals contain a large and diverse bacterial population associated with their mucus and tissues; (ii) the coral-associated bacterial population undergoes a rapid change when environmental conditions are altered; and (iii) although lacking an adaptive immune system (no antibodies), corals can develop resistance to pathogens. The Coral Probiotic Hypothesis may help explain the evolutionary success of corals and moderate the predictions of their demise.     

Boring sponges,an increasing threat for coral reefs affected by bleaching events

Coral bleaching is a stress response of corals induced by a variety of factors, but these events have become more frequent and intense in response to recent climate‐change‐related temperature anomalies. We tested the hypothesis that coral reefs affected by bleaching events are currently heavily infested by boring sponges, which are playing a significant role in the destruction of their physical structure. Seventeen reefs that cover the entire distributional range of corals along the Mexican Pacific coast were studied between 2005/2006, and later between 2009/2010. Most of these coral reefs were previously impacted by bleaching events, which resulted in coral mortalities. Sponge abundance and species richness was used as an indicator of bioerosion, and coral cover was used to describe the present condition of coral reefs. Coral reefs are currently highly invaded (46% of the samples examined) by a very high diversity of boring sponges (20 species); being the coral reef framework the substrate most invaded (56%) followed by the rubbles (45%), and the living colonies (36%). The results also indicated that boring sponges are promoting the dislodgment of live colonies and large fragments from the framework. In summary, the eastern coral reefs affected by bleaching phenomena, mainly provoked by El Niño, present a high diversity and abundance of boring sponges, which are weakening the union of the colony with the reef framework and promoting their dislodgment. These phenomena will probably become even more intense and severe, as temperatures are projected to continue to rise under the scenarios for future climate change, which could place many eastern coral reefs beyond their survival threshold.     

The role of microorganisms in coral health, disease and evolution

Coral microbiology is an emerging field, driven largely by a desire to understand, and ultimately prevent, the worldwide destruction of coral reefs. The mucus layer, skeleton and tissues of healthy corals all contain large populations of eukaryotic algae, bacteria and archaea. These microorganisms confer benefits to their host by various mechanisms, including photosynthesis, nitrogen fixation, the provision of nutrients and infection prevention. Conversely, in conditions of environmental stress, certain microorganisms cause coral bleaching and other diseases. Recent research indicates that corals can develop resistance to specific pathogens and adapt to higher environmental temperatures. To explain these findings the coral probiotic hypothesis proposes the occurrence of a dynamic relationship between symbiotic microorganisms and corals that selects for the coral holobiont that is best suited for the prevailing environmental conditions. Generalization of the coral probiotic hypothesis has led us to propose the hologenome theory of evolution.     

Palaeoenvironmental analysis based on rugose corals and microfacies: a case study at La Cornuda section (early Serpukhovian, Guadiato Area, SW Spain)

Combined analysis of microfacies and rugose coral features provides a useful tool for palaeoenvironmental studies in areas where outcrops are not appropriate for field observations. A detailed study of Serpukhovian rugose corals from La Cornuda section (Guadiato Area, SW Spain) by means of thin sections allowed the identification of environments where they lived. All corals were collected in unit 1 of the section where three different but intimately connected environments have been identified. Corals developed mainly in small mounds built jointly by microbial communities, algae and corals. Some corals also lived in calcareous shoals mainly composed of echinoderm plates. Finally, some corals occur in Oncoidal limestone that represents a shallow ramp, but they were mainly transported from shoals and mounds.     

Larval connectivity across temperature gradients and its potential effect on heat tolerance in coral populations

Coral reefs are increasingly exposed to elevated temperatures that can cause coral bleaching and high levels of mortality of corals and associated organisms. The temperature threshold for coral bleaching depends on the acclimation and adaptation of corals to the local maximum temperature regime. However, because of larval dispersal, coral populations can receive larvae from corals that are adapted to very different temperature regimes. We combine an offline particle tracking routine with output from a high‐resolution physical oceanographic model to investigate whether connectivity of coral larvae between reefs of different thermal regimes could alter the thermal stress threshold of corals. Our results suggest that larval transport between reefs of widely varying temperatures is likely in the Coral Triangle and that accounting for this connectivity may be important in bleaching predictions. This has important implications in conservation planning, because connectivity may allow some reefs to have an inherited heat tolerance that is higher or lower than predicted based on local conditions alone.     

Coral colonisation of a shallow reef flat in response to rising sea level: quantification from 35?years of remote sensing data at Heron Island, Australia

Observations made on Heron Island reef flat during the 1970s–1990s highlighted the importance of rapid change in hydrodynamics and accommodation space for coral development. Between the 1940s and the 1990s, the minimum reef-flat top water level varied by some tens of centimetres, successively down then up, in rapid response to local engineering works. Coral growth followed sea-level variations and was quantified here for several coral communities using horizontal two-dimensional above water remotely sensed observations. This required seven high spatial resolution aerial photographs and Quickbird satellite images spanning 35 years: 1972, 1979, 1990, 1992, 2002, 2006 and 2007. The coral growth dynamics followed four regimes corresponding to artificially induced changes in sea levels: 1972–1979 (lowest growth rate): no detectable coral development, due to high tidal currents and minimum mean low-tide water level; 1979–1991 (higher growth rate): horizontal coral development promoted by calmer hydrodynamic conditions; 1991–2001(lower growth rate): vertical coral development, induced by increased local sea level by ~12 cm due to construction of new bund walls; 2001–2007 (highest growth rate): horizontal coral development after that vertical growth had become limited by sea level. This unique time-series displays a succession of ecological stage comprising a ‘catch-up’ dynamic in response to a rapid local sea-level rise in spite of the occurrences of the most severe bleaching events on record (1998, 2002) and the decreasing calcification rates reported in massive corals in the northern part of the Great Barrier Reef.     

不同生长状态珊瑚光谱特征

珊瑚礁生态系统迅速退化是目前重要的生态环境问题之一,应用遥感技术监测大范围珊瑚礁的结构组成和变迁有很大的潜力。珊瑚光谱响应特征受珊瑚生态习性影响,在光学上相似而容易造成混淆误判。采集了西沙群岛大量石珊瑚样品的光谱,对其光谱特征进行分析及成因探讨。通过导数光谱、主成分分析研究了不同生长状态珊瑚的光谱差异,并建立珊瑚生长状态高光谱遥感判别准则。结果表明,珊瑚的光谱特性及其变化均较为复杂,受珊瑚种类和生长环境影响,光谱形状主要由共生藻色素吸收决定的。结合520—530 nm、564—574 nm和600—605 nm的导数光谱可以区分健康珊瑚、白化珊瑚和藻类覆盖的死珊瑚。总体判定准确度优于80%,误判的主要来源是种内珊瑚反射率差异。研究表明珊瑚礁环境高光谱遥感可以定量评估珊瑚状态的变化。     

Patterns in the distribution of soft corals across the central Great Barrier Reef

Distribution patterns of soft coral genera were examined at 11 reefs situated in a broad transect from inshore to the Coral Sea in the central region of the Great Barrier Reef. Twenty-five genera representing the Orders Alcyonacea and Stolonifera were recorded, and the survey also included one genus of the Order Gorgonacea. Total living soft coral cover is greatest on outershelf reef slopes, and is often less than and inversely related to the cover by stony corals. Soft coral diversity is generally low on reef flats, where soft coral cover is low or nil except in protected, inshore areas. The most diverse assemblages occur on reef slopes in midshelf and outershelf areas, where Efflatounaria and nephtheid genera predominate, and widely distributed alcyoniid genera are common. These richer assemblages are less well represented in the Coral Sea, while innershelf reefs support a less diverse fauna of somewhat different generic composition. Distribution patterns of soft corals across the transect broadly match similar variations in the distributions of stony corals and fishes, inshore reefs being generally depauperate. Such variations across the continental shelf are closely associated with changes in prevailing environmental conditions, but further research will be required to elucidate the effects of environmental parameters on benthic community structure.     

Regional‐scale dominance of non‐framework building corals on Caribbean reefs affects carbonate production and future reef growth

Coral cover on Caribbean reefs has declined rapidly since the early 1980's. Diseases have been a major driver, decimating communities of framework building Acropora and Orbicella coral species, and reportedly leading to the emergence of novel coral assemblages often dominated by domed and plating species of the genera Agaricia, Porites and Siderastrea. These corals were not historically important Caribbean framework builders, and typically have much smaller stature and lower calcification rates, fuelling concerns over reef carbonate production and growth potential. Using data from 75 reefs from across the Caribbean we quantify: (i) the magnitude of non‐framework building coral dominance throughout the region and (ii) the contribution of these corals to contemporary carbonate production. Our data show that live coral cover averages 18.2% across our sites and coral carbonate production 4.1 kg CaCO₃ m^?2 yr^?1. However, non‐framework building coral species dominate and are major carbonate producers at a high proportion of sites; they are more abundant than Acropora and Orbicella at 73% of sites; contribute an average 68% of the carbonate produced; and produce more than half the carbonate at 79% of sites. Coral cover and carbonate production rate are strongly correlated but, as relative abundance of non‐framework building corals increases, average carbonate production rates decline. Consequently, the use of coral cover as a predictor of carbonate budget status, without species level production rate data, needs to be treated with caution. Our findings provide compelling evidence for the Caribbean‐wide dominance of non‐framework building coral taxa, and that these species are now major regional carbonate producers. However, because these species typically have lower calcification rates, continued transitions to states dominated by non‐framework building coral species will further reduce carbonate production rates below ‘predecline’ levels, resulting in shifts towards negative carbonate budget states and reducing reef growth potential.     

Effects of coral bleaching on the feeding response of two species of coral-feeding fish

Coral bleaching is an increasingly prominent threat to coral reef ecosystems, not only to corals, but also to the many organisms that rely on coral for food and shelter. Coral-feeding fishes are negatively affected by coral loss caused by extensive bleaching, but it is unknown how feeding behaviour of most corallivorous fishes changes in response to coral bleaching. In this study, coral bleaching was experimentally induced in situ to examine the feeding response of two obligate corallivorous fish, Labrichthys unilineatus (Labridae) and Chaetodon baronessa (Chaetodontidae). Feeding rates were monitored before, during, and immediately after experimental bleaching of prey corals. L. unilineatus significantly increased its feeding on impacted corals during bleaching, but showed a steady decline in feeding once corals were fully bleached. Feeding response of L. unilineatus appears to parallel the expected stress-induced mucous production by bleaching colonies. In contrast, C. baronessa preferentially fed from healthy colonies over bleached colonies, although bleached colonies were consumed for five days following manipulation. Feeding by corallivorous fishes can play an important role in determining coral condition and mortality of corals following stress induced bleaching.     

Corals form characteristic associations with symbiotic nitrogen-fixing bacteria

The complex symbiotic relationship between corals and their dinoflagellate partner Symbiodinium is believed to be sustained through close associations with mutualistic bacterial communities, though little is known about coral associations with bacterial groups able to fix nitrogen (diazotrophs). In this study, we investigated the diversity of diazotrophic bacterial communities associated with three common coral species (Acropora millepora, Acropora muricata, and Pocillopora damicormis) from three midshelf locations of the Great Barrier Reef (GBR) by profiling the conserved subunit of the nifH gene, which encodes the dinitrogenase iron protein. Comparisons of diazotrophic community diversity among coral tissue and mucus microenvironments and the surrounding seawater revealed that corals harbor diverse nifH phylotypes that differ between tissue and mucus microhabitats. Coral mucus nifH sequences displayed high heterogeneity, and many bacterial groups overlapped with those found in seawater. Moreover, coral mucus diazotrophs were specific neither to coral species nor to reef location, reflecting the ephemeral nature of coral mucus. In contrast, the dominant diazotrophic bacteria in tissue samples differed among coral species, with differences remaining consistent at all three reefs, indicating that coral-diazotroph associations are species specific. Notably, dominant diazotrophs for all coral species were closely related to the bacterial group rhizobia, which represented 71% of the total sequences retrieved from tissue samples. The species specificity of coral-diazotroph associations further supports the coral holobiont model that bacterial groups associated with corals are conserved. Our results suggest that, as in terrestrial plants, rhizobia have developed a mutualistic relationship with corals and may contribute fixed nitrogen to Symbiodinium.     

The origin of Jurassic reefs: Current research developments and results

Summary In order to elucidate the control of local, regional and global factors on occurrence, distribution and character of Jurassic reefs, reefal settings of Mid and Late Jurassic age from southwestern Germany, Iberia and Romania were compared in terms of their sedimentological (including diagenetic), palaeoecological, architectural, stratigraphic and sequential aspects. Upper Jurassic reefs of southern Germany are dominated by siliceous sponge—microbial crust automicritic to allomicritic mounds. During the Oxfordian these form small to large buildups, whereas during the Kimmeridgian they more frequently are but marginal parts of large grain-dominated massive buildups. Diagenesis of sponge facies is largely governed by the original composition and fabric of sediments. The latest Kimmeridgian and Tithonian spongiolite development is locally accompanied by coral facies, forming large reefs on spongiolitic topographic elevations or, more frequently, small meadows and patch reefs within bioclastic to oolitic shoal and apron sediments. New biostratigraphic results indicate a narrower time gap between Swabian and Franconian coral development than previously thought. Palynostratigraphy and mineralostratigraphy partly allow good stratigraphic resolution also in spongiolitic buildups, and even in dolomitised massive limestones. Spongiolite development of the Bajocian and Oxfordian of eastern Spain shares many similarities. They are both dominated by extensive biostromal development which is related to hardground formation during flooding events. The Upper Jurassic siliceous sponge facies from Portugal is more localised, though more differentiated, comprising biostromal, mudmound and sponge-thrombolite as well as frequent mixed coral-sponge facies. The Iberian Upper Jurassic coral facies includes a great variety of coral reef and platform types, a pattern which together with the analysis of coral associations reflects the great variability of reefal environments. Microbial reefs ranging from coralrich to siliceous sponge-bearing to pure thrombolites frequently developed at different water depths. Reef corals even thrived within terrigeneous settings. In eastern Romania, small coral reefs of various types as well as larger siliceous sponge-microbial crust mounds grew contemporaneously during the Oxfordian, occupying different bathymetric positions on a homoclinal ramp. Application of sequence stratigraphic concepts demonstrates that onset or, in other cases, maximum development of reef growth is related to sea level rise (transgressions and early highstand) which caused a reduction in allochthonous sedimentation. The connection of reef development with low background sedimentation is corroborated by the richness of reefs in encrusting organisms, borers and microbial crusts. Microbial crusts and other automicrites can largely contribute to the formation of reef rock during allosedimentary hiatuses. However, many reefs could cope with variable, though reduced, rates of background sedimentation. This is reflected by differences in faunal diversities and the partial dominance of morphologically adapted forms. Besides corals, some sponges and associated brachiopods show distinct morphologies reflecting sedimentation rate and substrate consistency. Bathymetry is another important factor in the determination of reefal composition. Not only a generally deeper position of siliceous sponge facies relative to coral facies, but also further bathymetric differentiation within both facies groups is reflected by changes in the composition, diversity and, partly, morphology of sponges, corals, cementing bivalves and microencrusters. Criteria such as authigenic glauconite, dysaerobic epibentic bivalves,Chondrites burrows or framboidal pyrite in the surrounding sediments of many Upper Jurassic thrombolitic buildups suggest that oxygen depletion excluded higher reefal metazoans in many of these reefs. Their position within shallowing-upwards successions and associated fauna from aerated settings show that thrombolitic reefs occurred over a broad bathymetric area, from moderately shallow to deep water. Increases in the alkalinity of sea water possibly enhanced calcification. Reefs were much more common during the Late Jurassic than during the older parts of this period. Particularly the differences between the Mid and Late Jurassic frequencies of reefs can be largely explained by a wider availability of suitable reef habitats provided by the general sea level rise, rather than by an evolutionary radiation of reef biota. The scarcity of siliceous sponge reefs on the tectonically more active southern Tethyan margin as well as in the Lusitanian Basin of west-central Portugal reflects the scarcity of suitable mid to outer ramp niches. Coral reefs occurred in a larger variety of structural settings. Upper Jurassic coral reefs partly grew in high latitudinal areas suggesting an equilibrated climate. This appears to be an effect of the buffering capacity of high sea level. These feedback effects of high sea level also may have reduced oceanic circulation particularly during flooding events of third and higher order, which gave rise to the development of black shales and dysaerobic thrombolite reefs. Hence, the interplay of local, regional and global factors caused Jurassic reefs to be more differentiated than modern ones, including near-actualistic coral reefs as well as non-actualistic sponge and microbial reefs.     

Seasonal shifts in fatty acids and sterols in sponges,corals, and bivalves,in a southern Gulf of Mexico coral reef under river influence

Coral Reefs - Tropical coral reefs influenced by rivers are exposed to changes in turbidity, sedimentation, and wastewater discharges that might affect the growth and survival of the corals and...     

Sea-level changes as controlling factor of early diagenesis: the reefal limestones of Adnet (Late Triassic,Northern Calcareous Alps,Austria)

The uppermost Rhaetian Adnet reef is part of the Dachstein carbonate platform and is situated at the transition to the intrashelf Kössen Basin. Its diagenetic evolution is investigated focusing on dissolution cavities in the Tropfbruch quarry of Adnet (near Salzburg) stratigraphically situated immediately below the Triassic–Jurassic boundary. Sea-level changes due to global eustatic trends and regional tectonics are assumed to be the controlling factors in the development of a manifold diagenetic sequence characterized by phases of meteoric dissolution, marine and burial cementation, and internal sedimentation. Despite small-scale variations of the sequence, a superordinate pattern of diagenetic phases could be elaborated. Small-scale eustatic sea-level falls subordinate to a global regression trend caused subaerial exposures of the Adnet reef in the latest Rhaetian to earliest Hettangian. The result was karstification and meteoric dissolution of aragonitic coral skeletons (Retiophyllia) leading to the formation of biomoldic porosity. Coral septa which escaped dissolution were transformed into neomorphic calcite spar under meteoric–phreatic conditions. A first generation of dog-tooth cements precipitated sporadically on the altered coral skeletons. Eustatic sea-level rise in Early to Mid-Hettangian times caused a renewed flooding of the pore space of the Adnet reef by marine water and the influx of a first generation of internal sediments (IS I), derived from the karstified host rock of the Upper Rhaetian reef limestone. These internal sediments are overgrown by radiaxial-fibrous calcites (RFCs) whose oxygen-isotopic signature (δ¹⁸O = ?1.3 (±0.7)‰) indicates precipitation in deeper (colder) water (18–21°C) due to a first phase of drowning. An intermediate phase of eustatic sea-level lowstand in the Late Hettangian is expressed by dissolution and corrosion of RFCs. Rapid drowning of the Dachstein carbonate platform due to eustatic sea-level rise and tectonic movements took place in the Early Sinemurian and a second generation of internal sediments (IS II) derived from the Lower Sinemurian Adnet Formation is washed into the dissolution cavities. Where IS II is absent, RFCs are overgrown by a second generation of dog-tooth cements with a bright-luminescent outer rim indicating the transition to negative redox conditions in the pore water during shallow burial. Burial diagenesis is represented by blocky calcite cements which occlude the remaining pore space. Depleted oxygen-isotope values and significant Fe contents indicate precipitation under reducing redox conditions and elevated temperatures of 30–50°C at burial depths of 420–870 m. Locally, replacive saddle dolomite is the latest diagenetic phase in the Adnet reef indicating crystallization under hydrothermal influences related to compressional subduction regimes of the Penninic Ocean.