Amphibian communities along a forest degradation gradient in an East African forest reserve

The amphibian communities in Africa's tropical forests are of global conservation importance, but disturbances derived from anthropological activities threaten to dismantle this irreplaceable diversity. We explored the impacts of forest degradation on the amphibian community in Mabira Central Forest Reserve, Uganda. We sampled amphibians from March to July of 2015 in plots that were positioned along a gradient of forest degradation. We conducted visual encounter surveys across three categories of forest degradation with six 300-m transects in each (four surveys per transect). From 216 h of surveyor effort, we detected 3563 individual frogs representing 30 species from eight families and 13 genera. Hyperoliidae was the most diverse family represented by 13 species in four genera. Hyperolius had the highest number of species (nine) followed by four genera each represented by three species (Phrynobatrachus, Pytchadena, Leptopelis, and Sclerophrys). Comparisons among plots along a gradient of forest degradation revealed differences in species richness, composition, and frequency of encounters. The regenerating and degraded forest plots were similar in species composition to each other and were dominated by mostly widespread, open-canopy species. Several forest-dependent species were recorded in both the regenerating and mature forest plots but were absent from the degraded plots. In the regenerating and mature forests, species presence was significantly associated with high canopy cover, high relative humidity, and dense leaf litter, whereas the microhabitat variables of high grass cover and high temperature were most influential in the degraded forests. Our study provides important data on an Afrotropical amphibian community and suggests that forest degradation has dramatically altered the habitat to the detriment of forest specialist species.     

Amphibian and reptile communities of rainforest fragments: minimum patch size to support high richness and abundance

Information on animal communities inhabiting Neotropical fragmented landscapes is important for developing conservation strategies. The structure of amphibian and reptile communities in six tropical rainforest fragments (<20?ha) and two reference areas in continuous forest at Los Tuxtlas, Mexico was studied. A total of 3,481 individuals of 51 species of amphibians and reptiles were recorded across 12 bimonthly surveys during 2 years. Taxonomic composition was different between the smallest fragments and the reference areas. Six species were exclusive to large undisturbed forest and richness was significantly lower in the five smallest fragments (1.4–6.6?ha) compared with the largest patch, one or both of the reference areas. Amphibian abundance tended to be higher in large areas, while reptiles were more abundant in the five smallest fragments. Craugastor loki and Anolis uniformis were the dominant species in all sites, and particularly in the smaller fragments. Amphibian and reptile richness was positively related to larger patch sizes, deeper leaf litter, closed canopy cover, and higher relative humidity and negatively related to linear patch shape and high temperatures. Abundance of reptiles was positively associated to high temperatures, high density of woody debris, and closed canopy cover; it was negatively affected by linear patch shape, low humidity levels, and steeper slopes. While amphibian and reptile communities were strongly affected in vegetation fragments, these patches retained a considerable number of rainforest species. Fragments up to at least 17?ha have the potential for preserving communities with similar structure to those occurring in large tropical rainforests.     

Species‐habitat relationships and ecological correlates of butterfly abundance in a transformed tropical landscape

Tropical butterfly conservation strategies often focus on total and/or common species richness to assess the conservation value of a patch or habitat. However, such a strategy overlooks the unique dynamics of rare species. We evaluated the species‐habitat relationships of 209 common, intermediate, and rare butterfly species (including morphospecies) across four habitat types (mature, degraded, or fragmented forest, and urban parks) and two patch sizes (<400 ha, ≥400 ha) in Singapore. Common species richness was consistent across habitat types. Intermediate species richness declined by more than 50 percent in urban parks (relative to all forest habitats), and rare species richness was reduced by 50 percent in degraded and fragmented forest and by 90 percent in urban parks (relative to mature forest). Large patches had comparable overall richness to small patches, but they supported more rare species and three times as many habitat‐restricted species over a similar area. Importantly, a number of rare species were confined to single small patches. Mixed‐effects regression models were constructed to identify habitat and ecological/life history variables associated with butterfly abundance. These models revealed that species with greater habitat specialization, rare larval host plants, few larval host plant genera, and narrow global geographic ranges were more likely to be rare species. Overall, these results demonstrate that the richness of habitat‐restricted and rare species do not follow the same spatial distribution patterns as common species. Therefore, while conserving mature forests is key, effective butterfly conservation in a transformed landscape should take into account rare and habitat‐restricted species.     

Habitat Characteristics of Forest Fragments Determine Specialisation of Plant-Frugivore Networks in a Mosaic Forest Landscape

Plant-frugivore networks play a key role in the regeneration of sub-tropical forest ecosystems. However, information about the impact of habitat characteristics on plant-frugivore networks in fragmented forests is scarce. We investigated the importance of fruit abundance, fruiting plant species richness and canopy cover within habitat fragments for the structure and robustness of plant-frugivore networks in a mosaic forest landscape of South Africa. In total, 53 avian species were involved in fruit removal of 31 fleshy-fruiting plant species. Species specialisation was always higher for plants than for frugivores. Both species and network-level specialisation increased with increasing fruit abundance and decreased with increasing fruiting plant species richness and canopy cover within fragments. Interaction diversity was unaffected by fruit abundance and canopy cover, but increased slightly with increasing fruiting plant species richness. These findings suggest that especially the availability of resources is an important determinant of the structure of plant-frugivore networks in a fragmented forest landscape.     

Environment heterogeneity and seasonal effects in ground-dwelling ant (Hymenoptera: Formicidae) assemblages in the Parque Estadual do Rio Doce, MG, Brazil

This work aimed to explore the response of ant species assemblage to contrasting types of forests in a semideciduous stationary rainforest, in the Parque Estadual do Rio Doce, South Eastern Brazil. We compared antropomorphic borders of this park and natural ecotones, such as lake margins continuous with forests, as well as preserved forests far from ecotones. We investigated whether ground-dwelling ant species richness, abundance and composition would change according to forest types and ecotones. We expected greater species richness in interior tall forest, compared with low forest or ecotone habitats. In addition, we tested the effect of climate seasonality on ant assemblages found in each studied vegetation type. Each forest type was surveyed based on a minimum transect sampling unit of 150 m long summing up 30 pit-falls per unit. Two sampling events, one in dry season (September of 2001) and another in the rainy season (January of 2002) were performed. For both seasons, tall forest presented greater total number of ant species, however lower mean ant species and abundance per trap than other forest types, thus corroborating the prediction that ecotones might present high alpha diversity. Mean species richness and abundance did not differ between interior low forest and lake edge, or between these habitats and reserve border. In general, species composition were not clearly defined by forest types. Results here found suggest that species loss or community dominance by generalist species, eventually due to deforestation, is probably a much greater problem than previously thought. However, to understand patterns of insect species diversity and distribution in tropical ecosystem should be taken in account much more comprehensive, spatially explicit sampling designs.     

Terrestrial wildlife responses to logging and fire in a Bolivian tropical humid forest

Logging and wildfire are significant anthropogenic disturbance agents in tropical forests. We compared the abundance and species richness of selected terrestrial wildlife taxa including small mammals, amphibians, reptiles, and terrestrial invertebrates in areas burned by wildfire and then logged and in adjacent undisturbed areas of a tropical humid forest in Bolivia. Disturbed areas had 24% less canopy cover than undisturbed areas but had 2.6 times the cover of large woody debris. Understory cover did not differ between disturbed and undisturbed areas. Small mammal abundance and species richness in disturbed areas were 43 and 70% higher, respectively, than in adjacent undisturbed areas. Herpetofaunal abundance did not differ significantly among disturbed and undisturbed areas, but trends for higher abundance were observed for both reptiles and amphibians in disturbed areas. Herpetofaunal species richness was significantly higher in disturbed compared to undisturbed areas. Total terrestrial invertebrate abundance, as estimated by pitfall traps, was significantly higher in undisturbed compared to disturbed areas mostly due to higher abundances of Formicidae and Blattidae. However, two invertebrate groups, Orthoptera and Lepidoptera (larvae) were more abundant in disturbed areas. Wildlife conservation strategies for areas where logging or wildfire occur should take into account species- or guild-specific responses to these disturbance agents.     

Distribution of ground-dwelling beetle assemblages (Coleoptera) across ecotones between natural oak forests and mature pine plantations in North China

This paper studied edge effects resulting from logging to reforestation on the distribution of ground-dwelling beetles (Coleoptera) across ecotones between natural oak forests and mature pine plantations established after harvesting of natural forests. Using pitfall traps, ground-dwelling beetles were investigated at three replicated plots (ecotones) with three sampling positions of slope (lower, middle and upper) for each plot. Rarefaction estimates of species richness indicated that traps on natural forests and transition zones had more species than mature plantations did, and traps on the middle slope had more species than on the lower and upper slopes did. Results of an ANOVA analysis, which used forest type and slope position as factors and number of species and individuals as the response variables, showed a significant effect of forest type and slope position, and a significant interaction between forest type and slope position. Multivariate analyses (DCA and CCA) showed that beetles of transition zones were more similar to those of natural forests than to those of mature plantations, and that some environmental characteristics, i.e., proportion of broad-leaved trees, canopy cover and elevation (slope position), significantly affected species abundances. We conclude that the logging of natural oak forests and the reforestation of pine plantations can result in subtle variation in the composition and distribution of beetle assemblages at a local scale and such variation should be taken into account when conservation issues are involved.     

Past Human Disturbance Effects upon Biodiversity are Greatest in the Canopy; A Case Study on Rainforest Butterflies

A key part of tropical forest spatial complexity is the vertical stratification of biodiversity, with widely differing communities found in higher rainforest strata compared to terrestrial levels. Despite this, our understanding of how human disturbance may differentially affect biodiversity across vertical strata of tropical forests has been slow to develop. For the first time, how the patterns of current biodiversity vary between three vertical strata within a single forest, subject to three different types of historic anthropogenic disturbance, was directly assessed. In total, 229 species of butterfly were detected, with a total of 5219 individual records. Butterfly species richness, species diversity, abundance and community evenness differed markedly between vertical strata. We show for the first time, for any group of rainforest biodiversity, that different vertical strata within the same rainforest, responded differently in areas with different historic human disturbance. Differences were most notable within the canopy. Regenerating forest following complete clearance had 47% lower canopy species richness than regenerating forest that was once selectively logged, while the reduction in the mid-storey was 33% and at ground level, 30%. These results also show for the first time that even long term regeneration (over the course of 30 years) may be insufficient to erase differences in biodiversity linked to different types of human disturbance. We argue, along with other studies, that ignoring the potential for more pronounced effects of disturbance on canopy fauna, could lead to the underestimation of the effects of habitat disturbance on biodiversity, and thus the overestimation of the conservation value of regenerating forests more generally.     

Forecasting potential routes for movement of endemic birds among important sites for biodiversity in the Albertine Rift under projected climate change

The ability of species to shift their distributions in response to climate change may be impeded by lack of suitable climate or habitat between species’ current and future ranges. We examined the potential for climate and forest cover to limit the movement of bird species among sites of biodiversity importance in the Albertine Rift, East Africa, a biodiversity hotspot. We forecasted future distributions of suitable climate for 12 Albertine Rift endemic bird species using species distribution models based on current climate data and projections of future climate. We used these forecasts alongside contemporary forest cover and natal dispersal estimates to project potential movement of species over time. We identified potentially important pathways for the bird species to move among 30 important bird and biodiversity areas (IBAs) that are both currently forested and projected to provide suitable climate over intervening time periods. We examined the relative constraints imposed by availability of suitable climate and forest cover on future movements. The analyses highlighted important pathways of potential dispersal lying along a north‐south axis through high elevation areas of the Albertine Rift. Both forest availability and climate suitability were projected to influence bird movement through these landscapes as they are affected by future climate change. Importantly, forest cover and areas projected to contain suitable climate in future were often dissociated in space, which could limit species’ responses to climate change. A lack of climatically suitable areas was a far greater impediment to projected movement among IBAs than insufficient forest cover. Although current forest cover appears sufficient to facilitate movement of bird species in this region, protecting the remaining forests in areas also projected to be climatically suitable for species to move through in the future should be a priority for adaptation management.     

The response of amphibian communities to fish and habitat features in Mediterranean permanent ponds

Generalized linear models were used to test the effect of fish, using ponds with and without fish and habitat features as covariates, on richness and abundance of amphibian species. Five fish species and six amphibian species were recorded in 60 permanent ponds located in central Italy. The choice of covariates (macrophyte cover and pond surface area) was made after studying the correlations. The richness of amphibian species was not significantly affected by fish presence or macrophyte cover, in line with previous studies, since almost all the fish species were non-predatory. However, abundance of urodeles (newts) was negatively affected by fish and positively affected by macrophyte cover. Although fish may strongly influence the abundance and composition of amphibian communities, the results indicate that the cover of aquatic macrophytes may increase the available habitat for amphibians and therefore their abundance. Anuran species preferred ponds where fish were present, since both groups preferred larger ponds. Concordance between fish and amphibian species composition was not found by the Mantel and Partial Mantel tests. This indicates that the fish assemblages do not predict which amphibian species occur in the pond.     

Effects of Habitat Structure and Adjacent Habitats on Birds in Tropical Rainforest Fragments and Shaded Plantations in the Western Ghats, India

As large nature reserves occupy only a fraction of the earth’s land surface, conservation biologists are critically examining the role of private lands, habitat fragments, and plantations for conservation. This study in a biodiversity hotspot and endemic bird area, the Western Ghats mountains of India, examined the effects of habitat structure, floristics, and adjacent habitats on bird communities in shade-coffee and cardamom plantations and tropical rainforest fragments. Habitat and birds were sampled in 13 sites: six fragments (three relatively isolated and three with canopy connectivity with adjoining shade-coffee plantations and forests), six plantations differing in canopy tree species composition (five coffee and one cardamom), and one undisturbed primary rainforest control site in the Anamalai hills. Around 3300 detections of 6000 individual birds belonging to 106 species were obtained. The coffee plantations were poorer than rainforest in rainforest bird species, particularly endemic species, but the rustic cardamom plantation with diverse, native rainforest shade trees, had bird species richness and abundance comparable to primary rainforest. Plantations and fragments that adjoined habitats providing greater tree canopy connectivity supported more rainforest and fewer open-forest bird species and individuals than sites that lacked such connectivity. These effects were mediated by strong positive effects of vegetation structure, particularly woody plant variables, cane, and bamboo, on bird community structure. Bird community composition was however positively correlated only to floristic (tree species) composition of sites. The maintenance or restoration of habitat structure and (shade) tree species composition in shade-coffee and cardamom plantations and rainforest fragments can aid in rainforest bird conservation in the regional landscape.     

Species- and community-level responses to habitat spatial changes in fragmented rainforests: assessing compensatory dynamics in amphibians and reptiles

The rapid loss and degradation of tropical forests threatens the maintenance of biodiversity across different spatial scales. Nevertheless, the extirpation and population decline of some disturbance-sensitive species may be compensated for by colonization and proliferation of disturbance-adapted species, thus allowing distributions of community-level attributes (e.g., abundance and diversity) to be preserved in human-modified tropical landscapes. To test this poorly assessed hypothesis we evaluated species- and community-level responses of amphibians and reptiles to differences in forest patch (patch size, shape, and distance to water bodies) and landscape metrics (old-growth forest cover, degree of fragmentation, and matrix composition) in the fragmented Lacandona rainforest, Mexico. We found that the abundance of several amphibian and reptile species was strongly associated with forest patch and landscape attributes, being particularly higher in larger patches surrounded by a greater forest cover. Such changes at the species level generated notable changes in reptile communities. In particular, the abundance, diversity, and evenness of reptile communities were strongly related to patch size, patch shape, and matrix composition. Yet, because of compensatory dynamics in amphibians, this group showed weak responses at the community level. Despite such compensatory dynamics, our results indicate that forest loss at the patch and landscape levels represents the main threat to both amphibians and reptiles, thus indicating that to preserve herpetological communities in this biodiversity hotspot, conservation initiatives should be focused on preventing further deforestation.     

Rainforest seed rain into abandoned tropical Australian pasture is dependent on adjacent rainforest structure and extent

It is well known that the recovery of abandoned tropical pastures to secondary rainforest benefits from the arrival of seeds from adjacent rainforest patches. Less is known, however, about how the structural attributes of adjacent rainforest (e.g. tree density, canopy cover and tree height) impact seed rain patterns into abandoned pastures. Between 2011 and 2013, we used seed traps and ground seed surveys to track the richness and abundance of rainforest seeds entering abandoned pastures in Australia's wet tropics. We also tested how seed rain diversity is related to the distance from forest, the proportion of forest cover in the landscape and several structural attributes of adjacent forest patches, specifically average tree height, canopy cover, tree species richness and density. Almost no seeds were captured in elevated pasture seed traps, even near forest remnants. Abundant forest seeds were found in ground surveys but only within 10 m of forest edges. In ground surveys, seeds from wind‐dispersed species were more abundant, but less species rich, than animal‐dispersed species. A survey of pasture seedling recruits suggested that some forest seeds must be dispersing more than 10 m into pasture at very low frequencies, but only a few species are establishing there. Recruits were predominantly animal‐dispersed not wind‐dispersed species. In addition to distance from forest and the proportion of forest within a 100‐ to 200‐m radius of sampling sites, the richness and density of adjacent forest trees were the most important factors for explaining the probability of seed occurrence in abandoned pastures. Results suggest that without some restoration assistance, the recovery of abandoned pastures into secondary rainforest in Australia's tropical rainforests will likely be limited, at least in part, by a very low rate of seed dispersal away from forest edges and by the diversity and density of trees in adjacent remnant forests.     

Effects of peat swamp logging and agricultural expansion on species richness of native mammals in Peninsular Malaysia

The biodiversity inhabiting tropical peat swamp forests in Southeast Asia is currently threatened by commercial logging and agricultural expansion. The occurrence of mammals in such forests is often poorly known and the factors influencing their occurrence in these ecosystems have rarely been quantified. We aim to determine the key habitat and landscape drivers of mammal species richness in fragmented peat swamp reserves. We conducted camera trap surveys in the North Selangor Peat Swamp Forest (NSPSF), the last remaining area of peat swamp forest on the west coast of Peninsular Malaysia. We also measured vegetation structure and landscape metrics to investigate the relationship between these factors and mammal richness. We recorded a total of 16 mammal species from 45 sampling sites using camera traps located in peat swamp forest reserves. Mammal species richness increased with the abundance of large trees and distance away from roads. Species richness decreased significantly with canopy cover and height, the abundance of fallen trees, the abundance of forest palms and saplings, distance away from rivers, and a measure of landscape compositional heterogeneity. Our findings underscore the high conservation value of logged peat swamp forests and the urgent need to halt further deforestation. We recommend: (1) protecting riparian habitat; (2) avoiding further forest conversion particularly areas supporting large trees into oil palm plantations; and (3) limiting road development within and around the NSPSF.     

The Contribution of Tropical Secondary Forest Fragments to the Conservation of Fruit-feeding Butterflies: Effects of Isolation and Age

Concomitant with the rapid loss of tropical mature forests, the relative abundance of secondary forests is increasing steadily and the latter are therefore of growing interest for conservation. We analysed species richness of fruit-feeding nymphalid butterflies in secondary forest fragments of different age and isolation and in mature forest at the eastern margin of the Lore Lindu National Park in Central Sulawesi, Indonesia. From April to August 2001 we collected 2322 individuals of fruit-feeding butterflies, belonging to 33 species. Butterfly species richness increased with succession, but was significantly higher in mature forests than in all types of secondary forest. Isolation of the forest fragments did not have a significant effect on butterfly species richness in the range of distances (up to 1700 m) studied. Rather it appeared to affect only a few species. Species richness of endemic species was higher than of non-endemic species. Although endemic species were most diverse in mature forests, many species captured were restricted to secondary forests. Our results show that mature forest is essential for the conservation of nymphalid butterflies and for the endemic species in this area. However, considering the relatively large number of species found in these rather small habitat islands, secondary forest fragments, especially older successional stages, can be taken into account in conservation efforts and thus contribute to the preservation of tropical biodiversity on a landscape scale.     

Amphibian diversity increases in an heterogeneous agricultural landscape

As a group amphibians are the vertebrates most affected by anthropic activity, particularly by agriculture. The rapid advance of the agricultural frontier makes it important to identify the role of agroecosystems as habitat supply for amphibians. We analyzed the differences in amphibian assemblages and populations between habitats with different plant covers and different degrees of human intervention in northwestern Argentina. For three years we conducted 114 high frequency trap samplings to quantify abundance, specific composition and species richness of amphibian assemblages in three habitat types (lemon and sugarcane crops and secondary forest) of a piedmont agroecosystem of Tucumán province. Crops hosted more species and individuals than secondary forests, but the specific composition of forest was different from that of crops suggesting that they could be complementary. Although the assemblage abundance of every observation responded to climate, the strong effect of sampling year was not related to climatic factors suggesting that there might be long term fluctuations that were not analyzed. We also found that responses to agricultural practices were species specific, so no generalizations about these practices should be done. Our study shows that cultivated areas are not hostile environments for amphibians since they can lodge huge amphibian populations and that the occurrence of disturbances associated to agricultural practices is not necessarily reflected in a decrease in the abundance and richness of amphibians in the short term. However, our results also show that forested lands are necessary to lodge some specialist species which are very rare in the croplands. This suggests that environmental heterogeneity generated by the combination of natural and cultivated patches can increase biodiversity at landscape scale because this allows the coexistence of species related to either kind of environment.     

Butterfly community recovery in degraded rainforest habitats in the Upper Guinean Forest Zone (Kakum forest, Ghana)

Successful regeneration of secondary tropical forest might be crucial in the conservation of rainforests, since large areas of primary forest have been destroyed or degraded. Animal communities might play an important role in restoration of biological diversity in these secondary habitats, since some groups have high mobility and capacity for dispersal. Fruit-feeding butterflies were trapped to measure differences between butterfly communities in primary rainforest and disturbed forest habitats of different stage of regeneration including clear-cut, abandoned farmland, newly planted forest and middle-aged secondary growth. 3465 specimens representing 114 species were identified from 56 traps operated for 36 days. Extremely high values of rarefied species richness were estimated in the clear-cut habitat, due to the high number of singletons and doubletons. This was caused by a gap-effect that allowed penetration of canopy and open area species after disturbance. The differences between butterfly communities were best demonstrated through ecological composition, richness and abundance of indicator groups and habitat similarity based on Jaccard’s similarity index. The results show a clear ability of butterfly communities in degraded forest habitats to regenerate in 50–60 years after clearance.     

Recovery of Amphibian and Reptile Assemblages During Old‐Field Succession of Tropical Rain Forests

Conversion of tropical forests to agriculture affects vertebrate assemblages, but we do not know how fast or to what extent these assemblages recover after field abandonment. We addressed this question by examining amphibians and reptiles in secondary forests in southeastern Mexico. We used chronosequence data (12 secondary forests fallow for 1–23 yr and 3 old‐growth forest sites) to analyze successional trajectories and estimate recovery times of assemblage attributes for amphibians and reptiles. We conducted 6 surveys at each site over 14 mo (1200 person‐hours) and recorded 1552 individuals, including 25 species of amphibians and 36 of reptiles, representing 96 and 74 percent of the expected regional number of species, respectively. Abundance, species richness, and species diversity of amphibians increased rapidly with successional age, approaching old‐growth forest values in < 30 yr. Species richness and species diversity of reptiles reached old‐growth forest values in < 20 yr. By contrast, the abundance of reptiles and the assemblage composition of amphibians and reptiles recovered more slowly. Along the chronosequence, we observed more species replacement in reptile assemblages than in amphibian assemblages. Several species in the old‐growth forest were absent from secondary forests. Dispersal limitation and harsh conditions prevailing in open sites and early successional environments appear to preclude colonization by old‐growth forest species. Furthermore, short fallow periods and isolation of forest remnants lead to the formation of new assemblages dominated by species favored by human disturbances.     

Recovery of mammal diversity in tropical forests: a functional approach to measuring restoration

Ecological restoration is increasingly applied in tropical forests to mitigate biodiversity loss and recover ecosystem functions. In restoration ecology, functional richness, rather than species richness, often determines community assembly, and measures of functional diversity provide a mechanistic link between diversity and ecological functioning of restored habitat. Vertebrate animals are important for ecosystem functioning. Here, we examine the functional diversity of small‐to‐medium sized mammals to evaluate the diversity and functional recovery of tropical rainforest. We assess how mammal species diversity and composition and functional diversity and composition, vary along a restoration chronosequence from degraded pasture to “old‐growth” tropical rainforest in the Wet Tropics of Australia. Species richness, diversity, evenness, and abundance did not vary, but total mammal biomass and mean species body mass increased with restoration age. Species composition in restoration forests converged on the composition of old‐growth rainforest and diverged from pasture with increasing restoration age. Functional metrics provided a clearer pattern of recovery than traditional species metrics, with most functional metrics significantly increasing with restoration age when taxonomic‐based metrics did not. Functional evenness and dispersion increased significantly with restoration age, suggesting that niche complementarity enhances species' abundances in restored sites. The change in community composition represented a functional shift from invasive, herbivorous, terrestrial habitat generalists and open environment specialists in pasture and young restoration sites, to predominantly endemic, folivorous, arboreal, and fossorial forest species in older restoration sites. This shift has positive implications for conservation and demonstrates the potential of tropical forest restoration to recover rainforest‐like, diverse faunal communities.     

Assessing the Threat of Amphibian Chytrid Fungus in the Albertine Rift: Past,Present and Future

Batrachochytrium dendrobatidis (Bd), the cause of chytridiomycosis, is a pathogenic fungus that is found worldwide and is a major contributor to amphibian declines and extinctions. We report results of a comprehensive effort to assess the distribution and threat of Bd in one of the Earth’s most important biodiversity hotspots, the Albertine Rift in central Africa. In herpetological surveys conducted between 2010 and 2014, 1018 skin swabs from 17 amphibian genera in 39 sites across the Albertine Rift were tested for Bd by PCR. Overall, 19.5% of amphibians tested positive from all sites combined. Skin tissue samples from 163 amphibians were examined histologically; of these two had superficial epidermal intracorneal fungal colonization and lesions consistent with the disease chytridiomycosis. One amphibian was found dead during the surveys, and all others encountered appeared healthy. We found no evidence for Bd-induced mortality events, a finding consistent with other studies. To gain a historical perspective about Bd in the Albertine Rift, skin swabs from 232 museum-archived amphibians collected as voucher specimens from 1925–1994 were tested for Bd. Of these, one sample was positive; an Itombwe River frog (Phrynobatrachus asper) collected in 1950 in the Itombwe highlands. This finding represents the earliest record of Bd in the Democratic Republic of Congo. We modeled the distribution of Bd in the Albertine Rift using MaxEnt software, and trained our model for improved predictability. Our model predicts that Bd is currently widespread across the Albertine Rift, with moderate habitat suitability extending into the lowlands. Under climatic modeling scenarios our model predicts that optimal habitat suitability of Bd will decrease causing a major range contraction of the fungus by 2080. Our baseline data and modeling predictions are important for comparative studies, especially if significant changes in amphibian health status or climactic conditions are encountered in the future.