Diversity,consistency, and seasonality in parasite assemblages of two sympatric marine fish Pagrus pagrus (Linnaeus, 1758) and Pagellus bogaraveo (Brünnich, 1768) (Perciformes: Sparidae) off the coast of Algeria in the western Mediterranean Sea

Various host characteristics (i. e., feeding habits, geographic distribution) and habitat characteristics (i.e., seasonality) influence the structure of parasite assemblages. To compare the parasite assemblages of hosts representatives of two genera of the same fish family, simultaneously occupying a geographic region, and to examine if seasonal variations influence parasite occurrence and abundance, we examined the parasite assemblages of two sympatric marine fish, Pagrus pagrus (n = 308) and Pagellus bogaraveo (n = 315) off the coast of Algeria in the western Mediterranean. Specimens were collected during summer and autumn over three consecutive years (2014–2016). Parasite assemblages were high in species richness and abundance. We compiled an inventory of 40 parasite taxa, including ectoparasitic monogeneans and crustaceans, and endoparasitic trematodes, cestodes, acanthocephalans, and nematodes. Endoparasite taxa primarily consisted of adult gastro-intestinal parasites and long lived larval helminths. Information on the parasite community structure and seasonal variations in parasite populations of these two hosts from the Mediterranean is here provided. Observed patterns of composition, diversity, dominance, and similarity indicate an overall consistency in assemblage structure. Although each host species harbored distinct parasite communities, they shared a high proportion of parasite species suggesting similar use of a common local pool of parasites. However, most shared species did not contribute to structuring the assemblages. Seasonal patterns in parasite abundance were observed for both hosts, with peak prevalence, abundance, and diversity in autumn. Results suggest that, regardless of a common pool of parasites being available to sympatric species, several ecological filters over time, led to distinct, independent variations in the parasite assemblages in each species.     

Patterns of diversity and abundance of fleas and mites in the Neotropics: host‐related,parasite‐related and environment‐related factors

The effects of host‐related, parasite‐related and environmental factors on the diversity and abundance of two ectoparasite taxa, fleas (Insecta: Siphonaptera) and mites (Acari: Mesostigmata), parasitic on small mammals (rodents and marsupials), were studied in different localities across Brazil. A stronger effect of host‐related factors on flea than on mite assemblages, and a stronger effect of environmental factors on mite than on flea assemblages were predicted. In addition, the effects of parasite‐related factors on flea and mite diversity and abundance were predicted to manifest mainly at the scale of infracommunities, whereas the effects of host‐related and environmental factors were predicted to manifest mainly at the scale of component and compound communities. This study found that, in general, diversity and abundance of flea and mite assemblages at two lower hierarchical levels (infracommunities and component communities) were affected by host‐related, parasite‐related and environmental factors, and compound communities were affected mainly by host‐related and environmental factors. The effects of factors differed between fleas and mites: in fleas, community structure and abundance depended on host diversity to a greater extent than in mites. In addition, the effects of factors differed among parasite assemblages harboured by different host species.     

Functional and phylogenetic uniqueness of helminth and flea assemblages of two South African rodents

The loss of a particular species from a community may have different effects on its functioning, depending on the presence or absence of functionally similar or phylogenetically close species in that community (redundancy). Redundancy is thus defined as the fraction of species diversity not expressed by functional or phylogenetic diversity. We assessed functional and phylogenetic alpha- and beta-redundancy in helminth and flea assemblages of two species of South African rodents, Rhabdomys dilectus and Rhabdomys pumilio, using community uniqueness as the inverse indicator of redundancy. We asked whether patterns of functional and phylogenetic alpha- and beta-uniqueness differed between (i) parasite groups (endo- versus ectoparasites), (ii) host species within parasite groups, and (iii) biomes within host species. We found differences between the two hosts in the functional and phylogenetic alpha-uniqueness (but not beta-uniqueness) of flea, but not helminth, assemblages. Significant correlations between the alpha-uniqueness of parasite assemblages and the total parasite prevalence were found only for phylogenetic uniqueness and only in helminths. Pairwise site-by-site dissimilarities in uniqueness (beta-uniqueness) and pairwise dissimilarity in prevalence were significantly associated (positively) in helminths but not in fleas. A between-biome difference in functional (but not phylogenetic) alpha-uniqueness was found in both helminth and flea assemblages harboured by R. pumilio. We conclude that the resilience of parasite assemblages in terms of the effect on hosts depends not only on their transmission strategy but also on traits of host species and environmental factors.     

Metazoan parasite diversity of the endemic South African intertidal klipfish,Clinus superciliosus: Factors influencing parasite community composition

The current trend in marine parasitology research, particularly in South Africa, is to focus on a specific parasite taxon and not on the total parasite community of a specific fish host. However, these records do not always reveal the ecological role of parasites in ecosystems. Thus, the present study aimed to determine which factors influence the parasite community composition of the endemic southern African intertidal klipfish, Clinus superciliosus (n = 75). Metazoan parasites were sampled from four localities (two commercial harbours - west coast; and two relatively pristine localities - southeast coast) along the South African coast. A total of 75 klipfish were examined for parasites, where 30 distinct taxa, representing seven taxonomic groups were found: Acanthocephala (4 taxa), Cestoda (2 taxa), Crustacea (5 taxa), Digenea (11 taxa), Hirudinea (2 taxa), Monogenea (1 taxon) and Nematoda (5 taxa). Results indicated that the main driver of diversity was locality, with the highest diversity on the southeast coast, most likely due to higher water temperatures and upwelling compared to the west coast. The parasite community composition of the klipfish was significantly influenced by water temperature and parasite life cycle. These results emphasise the importance of parasitological surveys including all parasite taxa in hosts from multiple localities and seasons, to better comprehend their ecological role.     

Similarity in parasite community structure may be used to trace latitudinal migrations of Odontesthes smitti along Argentinean coasts

The aims of this study were to determine the existence of migratory movements and to identify ecological stocks of the silverside Odontesthes smitti along its distribution in the Southern Atlantic Ocean, using metazoan parasites as biological tags. Samples were obtained from San José Gulf (SJ) (42° 25' S; 64° 07' W) and Nuevo Gulf (NG) (42° 47' S; 65° 02' W) in north Patagonia during winter and summer and in waters off Mar del Plata (MDP) (38° 03' S; 57° 32' W), Bonaerense region, during winter. Fifteen parasite species were collected. Multivariate statistical procedures on parasite community data showed strong effect of host size on the structure of parasite assemblages. Taking into account the variations among samples due to host size, the differential structure of parasite communities between SJ and NG suggests that fish inhabiting these localities could belong to different ecological stocks. Fish from MDP and SJ caught in summer showed similar composition in their parasite assemblages, which is congruent with a migratory cycle that implies that fish caught in MDP during winter inhabit SJ during summer. Further evidence of the Patagonian origin of MDP O. smitti is the presence of the digenean Proctotrema bartolii in fish from both regions. Proctotrema bartolii is acquired by O. smitti only in the Magellanic province, where its intermediate host, Darina solenoides, is distributed. The analyses suggest that O. smitti inhabiting north Patagonian gulfs could belong to different ecological stocks and that O. smitti caught in MDP could have come from SJ.     

云南亚热带南部孢粉空间组合特征及其与环境分异的关系

以云南亚热带南部野外调研孢粉资料为基础,分析了7个样地的35个表土样品以及28个剖面样品孢粉组合的空间分异特征.结果发现:(1)表土孢粉无论是在科属种类、数量及优势科属还是在科属植物区系上,哀牢山山脉东西两侧的样地均具有较大的差异.孢粉科属种类和数量方面,哀牢山西侧样地要较东部丰富;优势科属方面,哀牢山山脉西侧植物群落的优势科属不明显,且较东部要复杂,而东部地区植物群落的优势科属则较为集中和突出;植物区系分布方面,世界广布、泛热带、热带亚洲至热带非洲以及北温带分布等4个植物区系,其数量和所占比例东西差异都很大.(2)剖面孢粉的分析结果显示,其空间变化趋势与表土孢粉基本一致,同样反映了孢粉组合的东西空间差异.(3)孢粉组合的空间组合与区域的地形、气候分异特征有关.纵向排列的山系对大气环流的"阻隔"作用,以及哀牢山东西侧不同的季风环流系统导致的水热组合条件的差异是造成孢粉组合空间分异格局的主要原因.云南亚热带南部孢粉空间组合反映了区内自然环境的区域差异.     

Do captive conditions favor shedding of parasites in the reared Atlantic bluefin tuna (Thunnus thynnus)?

Tuna (Thunnus spp.) has been characterized by long distance migrations, highly predatory behavior and longevity, all of which in turn, enable infections with a wide spectrum of different parasitic groups, reflecting in a remarkable diversity of tuna parasite communities. Since 2003, we have been monitoring parasite communities of Atlantic bluefin tuna (Thunnus thynnus) that are caught from the wild and transferred into cages during spring-summer months, as well as assemblages in fish that exit rearing cycle during the winter harvest period after 1.5 years. Interestingly in reared tuna, parasitic populations exhibit a significant decreasing trend at the end of the rearing cycle, rarely observed in other intensive productions that represent a suitable environment for the emergence, establishment and transmission of pathogens. In order to assess epizootiological behavior of tuna parasites assemblages at the beginning (B group) and at the end (A group) of 1.5 year rearing cycle, we examined data on parasite prevalence and abundance over 4 years. The aim was to evaluate parasite diversity indices and emerging differences between newly caught and harvested fish, as well as community compositions and their nestedness in respect to the event in the rearing cycle (capture or harvest time). In order to be able to predict classification of tuna in two categories (newly caught or heavily infected and harvested or less infected fish), based on empirical didymozoids abundances and year of sampling, we built a decision tree model. Results suggest that specificities of parasite assemblages and their dynamics in tuna before and after farming have no similar precedents in aquaculture. A trend of parasitic pauperization repeating in each rearing cycle over four-years time, in once diverse and species rich parasite communities is observed, however, structures of both B and A group rearing assemblages remain nested, with the same species being core parasites (Didymosulcus katsuwonicola and Koellikerioides intestinalis). The B group exhibited significantly higher total parasite richness and mean parasites abundance, as well as the heteroxenous species richness and abundance in comparison to A group, where monoxenous species were not recorded at all. Eleven parasite species out of 26 taxa were selected as important in discriminating between B and A groups' parasites assemblages, while significantly the most abundant in B group were D. katsuwonicola, Platocystis alalongae, K. intestinalis, Koellikerioides internogastricus, Didymocystis abdominalis and Anisakis sp. It is hard to postulate the combination of factors affecting these parasite populations, but environmental, anthropogenic or host intrinsic influence has to be taken into account for further investigation.     

Concordance between plant species,oribatid mites and soil in a Mediterranean stone pine forest

Biological interactions between above-ground and below-ground organisms are not clearly defined among communities with regard to compositional patterns. The study investigates the concordance of species assemblages between vascular plants and oribatid mites and soil chemical properties with special attention to the role of vegetation structure, i.e. tree, shrub and herbaceous cover, for biological components. Data were collected in a Mediterranean coastal Nature Reserve using sampling design based on random selection of plots with cover of stone pine (Pinus pinea L.) exceeding 15%. Agreement of distribution patterns was verified by Spearman’s rank correlation coefficient applied to pairs of matrices of plot scores by principal component analysis (plants, mites and soil) and the Mantel test. The feasible role of vegetation cover on plant and mite assemblages was tested by redundancy analysis (RDA). Significant correlations were found for biological assemblages, indicating congruent plant–mite compositional patterns. On the other hand, the hypothesis of concordance between biological communities and soil was rejected. Moreover, RDA showed that vegetation cover was a driver of both plant and oribatid mite assemblages. In particular, herbaceous cover proved to be a good proxy for the two biological communities investigated, with different taxa linked to forest clearings and to areas with denser tree cover. Our results indicate that soil features were not of primary importance for below-ground and above-ground community assemblages in the study area. In the light of our findings and ongoing threats in coastal areas, we recommend that management measures be directed at maintenance of diversified vegetation structure, which may ensure above-ground and below-ground biodiversity with diverse biological community assemblages.     

Experimental evidence of predation by juvenile flounder, Platichthys flesus, on a shallow water meiobenthic community

In the northern Baltic Sea juvenile flounder, Platichthys flesus, occur in high abundances on shallow sandy bottoms in late summer and autumn. They feed mainly on meiofauna and the ontogenetic switch to macrofaunal sized food occurs at a larger size here than in other areas, exemplifying the high relative importance of meiofauna. Consequently, juvenile P. flesus in the Baltic feed for a longer period on meiofauna, and could thus be expected to have a stronger predation effect on the meiofaunal assemblages. In this study the predation effects of juvenile P. flesus on meiofaunal abundances and community structure were studied using microcosms that were sampled repeatedly over a 3-week period. Significant differences between treatment and control were found for the total number of taxa, for abundances of harpacticoids, copepod nauplii and ostracods. The nematode community was not affected, but one genus, Axonolaimus, was negatively affected by predation. The predation affected meiofaunal community structure as the major taxon diversity was significantly reduced. The results suggest that the meiofauna on shallow sandy bottoms may be structured by juvenile P. flesus, and the combined predation pressure of juvenile flounder and other epibenthic predators in the area might be considerable. Microcosms are effective in testing natural predation, especially on meiofaunal communities, but field experiments should be conducted to account for the physical characteristics of the area studied.     

Disease and pollution alter Daphnia taxonomic and clonal structure in experimental assemblages

1. Environmental stressors can influence population and community structure. However, the majority of experimental work on multiple environmental stressors has been done at the individual level only. 2. In this work, we followed changes in experimental assemblages of Daphnia (waterfleas; consisting of two taxa and three clones per taxon) after exposure to the fungal parasite Metschnikowia sp. and/or the pesticide diazinon. 3. We found a significant shift in taxonomic and clonal composition under both stressors. Strikingly, in the parasite and parasite + pesticide treatments, one taxon went extinct. While the pesticide had no effect on total parasite prevalence, the taxon that was more susceptible to extinction was, at the same time, more infected when additionally exposed to the pesticide. Furthermore, the density of all adult females was significantly reduced in the parasite treatment, but not in the pesticide treatment. 4. Our results demonstrate that the dynamics of Daphnia assemblages are altered by parasites and pesticide exposure. Given the key role of Daphnia in aquatic food webs in transferring primary production into fish food, this could be of wide significance in aquatic ecosystems.     

Hydraulic microhabitats and the distribution of macroinvertebrate assemblages in riffles

1. The influence of hydraulic conditions on the spatial distribution of macroinvertebrate assemblages was investigated in three riffles in a perennial Australian river. 2. Velocity, depth and variability of substrate roughness were measured at each of 56 macroinvertebrate sampling locations. Complex hydraulic variables (roughness Reynolds number, shear velocity, Froude number) were calculated from combinations of two or three of the directly measured variables. The biological significance of directly measured and complex hydraulic variables was determined by a combination of univariate and multivariate statistical procedures. 3. Macroinvertebrate abundance, number of taxa and community composition were significantly different between the identified roughness Reynolds number, Froude number, velocity and shear velocity microhabitats throughout the studied riffles. 4. Regression analysis showed macroinvertebrate abundance and number of taxa were negatively related to roughness Reynolds number, shear velocity, velocity and Froude number. Depth was negatively related to abundance. In general, the majority of the macroinvertebrate community preferred the areas of riffles with the lowest near‐bed turbulence. 5. Roughness Reynolds number explained more of the spatial variation in invertebrate abundance, number of taxa and community composition than the other hydraulic variables, either directly measured or calculated. Of the directly measured variables, velocity had the greatest explanatory power, which was marginally less than roughness Reynolds number and shear velocity. 6. This study demonstrated that small‐scale differences in hydraulic conditions created by combinations of velocity, depth and substrate roughness have an important role in the spatial distribution of macroinvertebrate assemblages in riffle habitats.     

Drivers of parasite community structure in fishes of the continental shelf of the Western Mediterranean: the importance of host phylogeny and autecological traits

We explored the relationships between features of host species and their environment, and the diversity, composition and structure of parasite faunas and communities using a large taxonomically consistent dataset of host-parasite associations and host-prey associations, and original environmental and host trait data (diet, trophic level, population density and habitat depth vagility) for the most abundant demersal fish species off the Catalonian coast of the Western Mediterranean. Altogether 98 species/taxa belonging to seven major parasite groups were recovered in 683 fish belonging to 10 species from seven families and four orders. Our analyses revealed that (i) the parasite fauna of the region is rich and dominated by digeneans; (ii) the host parasite faunas and communities exhibited wide variations in richness, abundance and similarity due to a strong phylogenetic component; (iii) the levels of host sharing were low and involved host generalists and larval parasites; (iv) the multivariate similarity pattern of prey samples showed significant associations with hosts and host trophic guilds; (v) prey compositional similarity was not associated with the similarity of trophically transmitted parasite assemblages; and (vi) phylogeny and fish autecological traits were the best predictors of parasite community metrics in the host-parasite system studied.     

The influence of biotope availability on macroinvertebrate assemblages in South African rivers: implications for aquatic bioassessment

1. Macroinvertebrate biotope preferences and the influence of differences in the availability of biotopes on individual taxa, macroinvertebrate assemblages and a biotic index, the South African Scoring System (SASS), were investigated in two regions of South Africa. 2. Among biotope differences in individual taxa and macroinvertebrate assemblages resulted in differences in SASS scores, with differences in assemblages being greater among biotopes than between sites. 3. All three metrics studied (SASS score, number of taxa and average score per taxon, ASPT), differed significantly among biotopes, with highest scores consistently recorded in the stones biotope, while lowest SASS scores and fewest taxa were recorded in the sand biotope. 4. SASS score and number of taxa were positively, while ASPT was negatively correlated with number of biotopes sampled. 5. The observed biotope differences highlight the importance of sampling and comparing data from sites separately for each biotope.     

Distribution of recent benthic foraminifera in shelf carbonate environments of the Western Mediterranean Sea

The distribution of recent shallow-water benthic foraminifera in surface sediment samples from cool-water carbonate environments of the Oran Bight, Alboran Platform and Mallorca Shelf in the Western Mediterranean Sea was studied. Multivariate statistical analyses resulted in the identification of species assemblages, representing different environmental settings. In all three regions the assemblages show a distinct bathymetric zonation that is mainly attributed to the distribution of rhodoliths and related substrates, but also to water turbulence and the availability of food at the sea floor. The live assemblages (Rose Bengal stained individuals) are characterised by rather low diversity and low standing stocks, likely reflecting seasonal population dynamics. In the Oran Bight, elevated standing stocks of “high food”-taxa suggest the impact of anthropogenic eutrophication on the near-coastal benthic ecosystems of this area. The diversity of the dead assemblages is higher than in siliclastic shelf ecosystems of the Mediterranean Sea but lower when compared to carbonate environments of the Levantine Sea. This regional difference is mainly attributed to lower sea surface temperatures and the lack of Lessepsian invaders in the western Mediterranean Sea. In all study areas, a distinct faunal change occurs between approximately 80–90 m water depth. This change coincides with the lower distribution limit of living rhodoliths at the shelf of Mallorca, providing coarse-grained substrates that are dominated by attached taxa. Below this depth interval, the fauna shows regional differences depending on the grain-size and related accumulation of organic material. Fine-grained substrates with infaunal niches are restricted to low-energy environments on the deeper shelf southwest off Mallorca.     

Diversity and community composition of butterflies and odonates in an ENSO-induced fire affected habitat mosaic: a case study from East Kalimantan, Indonesia

Little is known about the diversity of tropical animal communities in recently fire‐affected environments. Here we assessed species richness, evenness, and community similarity of butterflies and odonates in landscapes located in unburned isolates and burned areas in a habitat mosaic that was severely affected by the 1997/98 ENSO (El Niño Southern Oscillation) event in east Kalimantan, Indonesian Borneo. In addition related community similarity to variation in geographic distance between sampling sites and the habitat/vegetation structure Species richness and evenness differed significantly among landscapes but there was no congruence between both taxa. The species richness of butterflies was, for example, highest in sites located in a very large unburned isolate whereas odonate species richness was highest in sites located in a small unburned isolate and once‐burned forest. We also found substantial variation in the habitat/vegetation structure among landscapes but this was mainly due to variation between unburned and burned landscapes and variation among burned landscapes. Both distance and environment (habitat/vegetation) contributed substantially to explaining variation in the community similarity (beta diversity) of both taxa. The contribution of the environment was, however, mainly due to variation between unburned and burned landscapes, which contained very different assemblages of both taxa. Sites located in the burned forest contained assemblages that were intermediate between assemblages from sites in unburned forest and sites from a highly degraded slash‐and‐burn area indicating that the burned forest was probably recolonised by species from these disparate environments. We, furthermore, note that in contrast to species richness (alpha diversity) the patterns of community similarity (beta diversity) were highly congruent between both taxa. These results indicate that community‐wide multivariate measures of beta diversity are more consistent among taxa and more reliable indicators of disturbance, such as ENSO‐induced burning, than univariate measures.     

Parasites as Biological Tags for Stock Discrimination of Beaked Redfish (Sebastes mentella): Parasite Infra-Communities vs. Limited Resolution of Cytochrome Markers

The use of parasites as biological tags for discrimination of fish stocks has become a commonly used approach in fisheries management. Metazoan parasite community analysis and anisakid nematode population genetics based on a mitochondrial cytochrome marker were applied in order to assess the usefulness of the two parasitological methods for stock discrimination of beaked redfish Sebastes mentella of three fishing grounds in the North East Atlantic. Multivariate, model-based approaches demonstrated that the metazoan parasite fauna of beaked redfish from East Greenland differed from Tampen, northern North Sea, and Bear Island, Barents Sea. A joint model (latent variable model) was used to estimate the effects of covariates on parasite species and identified four parasite species as main source of differences among fishing grounds; namely Chondracanthus nodosus, Anisakis simplex s.s., Hysterothylacium aduncum, and Bothriocephalus scorpii. Due to its high abundance and differences between fishing grounds, Anisakis simplex s.s. was considered as a major biological tag for host stock differentiation. Whilst the sole examination of Anisakis simplex s.s. on a population genetic level is only of limited use, anisakid nematodes (in particular, A. simplex s.s.) can serve as biological tags on a parasite community level. This study confirmed the use of multivariate analyses as a tool to evaluate parasite infra-communities and to identify parasite species that might serve as biological tags. The present study suggests that S. mentella in the northern North Sea and Barents Sea is not sub-structured.     

Division-Specific Differences in Bacterial Community Assembly of Two Alkaline Hot Spring Ecosystems from Yellowstone National Park

A fundamental issue in ecology is whether communities are random assemblages or, alternatively, whether there are rules that determine which combinations of taxa can co-occur. For microbial systems, in particular, the question of whether taxonomic groups exhibit differences in community organization remains unresolved but is critical for our understanding of community structure and function. Here, we used presence–absence matrices derived from bar-coded pyrosequencing data to evaluate the assembly patterns of eight bacterial divisions distributed along two Yellowstone National Park hot spring outflow channels. Four divisions (Cyanobacteria, Chloroflexi, Acidobacteria, and Cytophaga–Flavobacterium–Bacteroides) exhibited less co-occurrence than expected by chance, with phototrophic taxa showing the strongest evidence for nonrandom community structure. We propose that both differences in environmental tolerance and competitive interactions within divisions contribute to these nonrandom assembly patterns. The higher degree of nonrandom structure observed for phototrophic taxa compared with the other divisions may be due in part to greater overlap in resource usage, as has been previously proposed for plant communities.     

The influence of initial colonization by hydropsychid caddisfly larvae on the development of stream invertebrate assemblages

Many aspects of the colonization history of a disturbed site can influence the development of a biological community. Initial colonization is known to play a significant role in community development because of the facilitative or inhibitory effects that `pioneer' species can have on subsequently arriving taxa. We performed an experiment to assess how initial colonization by two species of benthic invertebrates (Trichoptera: Hydropsychidae) might influence the development of stream faunal assemblages. Substrate baskets initially colonized by either Hydropsyche depravata or Ceratopsyche bronta were placed alongside control baskets in a recently flooded stream. After baskets had colonized for 30 days, we found that species composition in treatment baskets was identical to that in control baskets, indicating that the caddisfly taxa had no selective effects on colonization of other macroinvertebrate species. We did, however, find that C. bronta facilitated the recruitment of all species in the colonist pool leading to greater overall abundance and biomass of macroinvertebrates in the final assemblages. In contrast, H. depravata had no effect on the abundance or biomass of colonizing invertebrates. The differential effects of these two taxa on abundance and biomass may have been related to differences in microhabitat complexity created by the construction of their retreats and catchnets. The results of this study support the growing recognition that colonization history does influence the structure of lotic communities, but they also suggest that even closely related taxa can play different roles as initial colonists in community development.     

Ichthyofaunal assemblages in estuaries: A South African case study

This review places the life-history styles of fishes associated with South African estuaries in a global context and presents a classification system incorporating all the major life-history categories for estuary-associated fish species around the world. In addition, it documents the early life histories of the major fish groups in South African estuaries, with particular emphasis on the differing modes of estuarine utilization by marine, estuarine and freshwater taxa.This review details factors influencing the ichthyofaunal community structure in South African estuaries. The availability of fish for recruitment into an estuary depends primarily upon the distributional range of euryhaline marine and estuarine species, with tropical and temperate taxa showing marked abundance trends. Within a particular biogeographic region, however, estuarine type and prevailing salinity regime have a major influence on the detailed ichthyofaunal structure that develops. There is an increasing preponderance of marine fish taxa when moving from a freshwater-dominated towards a seawater-dominated type of system, and a decline in species diversity between subtropical estuaries in the north-east and cool temperate systems in the south-west. Similar declines in fish species diversity between tropical and temperate estuaries in other parts of the world are highlighted.Fish assemblages in estuaries adjust constantly in response to changing seasons, salinities, turbidities, etc. Despite persistent fluctuations in both the biotic and abiotic environment, the basic ichthyofaunal structure appears to have an underlying stability and to be predictable in terms of the response of individual species to specific conditions. This stability seems to be governed by factors such as the dominance of eurytopic taxa within estuarine assemblages and the robust nature of food webs within these systems. The predictability arises from factors such as the seasonality associated with estuarine spawning cycles and juvenile fish recruitment patterns. These patterns, together with a well-documented resilience to a wide range of physico-chemical and biotic perturbations, appear to be an underlying feature of fish assemblages in estuaries around the world.In contrast to marine fish species, estuary-associated taxa have received little conservation attention. Apart from the designation of protected areas, the main direct means of conserving estuary-associated fish stocks include habitat conservation and controls over fishing methods, effort, efficiency and seasonality. Of these, the conservation of fish habitats, the most important, because healthy aquatic environments invariably support healthy fish populations. The use of estuarine sanctuaries for fish conservation is briefly reviewed, as well as the legislation governing the USA National Estuarine Research Reserve System (NERRS) and the Australian Marine and Estuarine Protected Area (MEPA) system. It is concluded that South Africa requires an expansion of the existing Estuarine Protected Area (EPA) network, as well as the upgrading of selected 'estuarine reserves' where fishing is permitted, into 'estuarine sanctuaries' where no exploitation of biological resources is allowed.