Hyperaccumulation of nickel by two Alyssum species from the serpentine soils of Iran

Serpentine soils, which contain relatively high concentrations of nickel and some other metals, are the preferred substrate for some plants, especially those that accumulate Ni in their tissues. In temperate regions more Ni-hyperaccumulator plants are found in Alyssum than in any other genus. In this study, serpentine soils of two areas (Marivan and Dizaj) in the west/northwest of Iran and also perennial Alyssum plants growing on these soils were analyzed for Ni and some other metals. The highest concentrations of total metals in the soils of these areas for Ni, Cr, Co and Mn were 1,350, 265, 94 and 1,150 μg g⁻¹, respectively, while concentrations of Fe, Mg and Ca reached 3.55%, 16.8% and 0.585% respectively. The concentration of exchangeable Ni in these soils is up to 4.5 μg g⁻¹. In this study two Alyssum species, A. inflatum and A. longistylum, have been collected from Marivan and Dizaj, respectively. Analysis of leaf dry matter shows that they can contain up to 3,700 and 8,100 μg Ni g⁻¹, respectively. This is the first time that such high Ni concentrations have been found in these species. The concentrations of other metals determined in these species were in the normal range for serpentine plants, except for Ca, which was higher, up to 5.3% and 3.5%, respectively     

Hyperaccumulation of nickel by hairy roots of alyssum species: comparison with whole regenerated plants

Hairy roots were used to investigate nickel uptake by the hyperaccumulator species, Alyssum bertolonii, A. tenium, and A. troodii. The Ni biosorption capacity of A. tenium hairy roots was lower than for other types of biomass such as bacteria and algae; in short-term (9-h) equilibrium studies, the highest Ni content measured in the roots was 17 500 microg g(-1) dry weight at a liquid concentration of about 4000 ppm. Using long-term hairy root cultures, it was demonstrated that Ni tolerance and hyperaccumulation do not necessarily depend on the presence of shoots or root-shoot translocation. A. bertolonii hairy roots remained healthy in appearance and continued to grow in the presence of 20-100 ppm Ni, accumulating up to 7200 microg g(-1) dry weight Ni. In contrast, hairy roots of Nicotiana tabacum turned dark brown at 20 ppm Ni and growth was negligible. The ability to grow at high external Ni concentrations allowed hyperaccumulator hairy roots to remove much greater amounts of heavy metals from the culture liquid than nonhyperaccumulator hairy roots, even though biomass Ni concentrations were similar. Although hairy roots proved to be a useful tool for investigating Ni hyperaccumulation, there were significant differences in the Ni uptake capacity of hairy roots and whole plants. Regenerated plants of A. tenium were much more tolerant of Ni and capable of accumulating higher Ni concentrations than hairy roots of this species.     

New magnet-sensitive structures in bacterial and archaeal cells

The objects of the investigation were: distribution of intracellular magnet-sensitive structures among different taxonomic groups of prokaryotes, localisation and organisation of the magnet-sensitive inclusions (MsI) in cells. The MsI were discovered in representatives of both prokaryotic domains (Bacteria and Archaea), 2 kingdoms and 7 orders of bacteria. They were some amorphous or non-crystalline globules with the electron-transparent centre surrounded with an electron-dense homogenous matrix. The magnetic nature of the structures was shown by attraction with an applied magnet both for the cell suspensions and for the MsI isolated and separated from the destroyed cells. The MsI were studied with transparent electron microscopy and with X-ray analyses. When the cells were grown in the iron-containing nutrient medium, the matrix was enriched with iron. It was shown also that some bacteria grown with cobalt or with chromium contained the cobalt- or chromium-enriched magnetic inclusions.     

Hyperaccumulation of nickel by Alyssum Linnaeus (Cruciferae).

Herbarium specimens of all except one of the 168 recognized species of Alyssum Linnaeus have been analysed for their nickel content in order to identify hyperaccumulators (greater than 1000 microgram per g dry mass) of nickel. A further 31 hyperaccumulators (all in section Odontarrhena) were discovered in addition to the 14 European species reported earlier. Pot trials on the non-accumulator A. serpyllifolium Desfontaines and the hyperaccumulator A. pintodasilvae Dudley in ed. involving addition of nickel to the medium in which the plants were growing, showed that not all species of of section Odontarrhena were able to act as hyperaccumulators of nickel. Hyperaccumulation occurred almost exclusively in the eastern Mediterranean area and Turkey. There appeared to be a definite correlation between species diversity, proliferation and endemism on the one hand, and extremely high nickel concentrations (greater than 1%) on the other. The data have been used to assess the evidence for promoting section Odontarrhena to generic rank.     

1,10-Phenanthroline-5,6-dione complexes of middle transition elements: Mono- and dinuclear derivatives

The synthesis and the characterization of several mono- and dinuclear middle transition metal derivatives of 1,10-phenanthroline-5,6-dione, 1, are presented. The reaction of 1 with CrCl₂(THF)₂ gives CrCl₂(O,O′-C₁₂H₆N₂O₂)(THF)₂, 2, while the halides of iron(II), cobalt(II) and nickel(II) afford adducts of general formula MX₂(N,N′-C₁₂H₆N₂O₂), M = Fe, 4, Co, 5, X = Cl; M = Ni, 6, X = Br. DFT calculations on CrCl₂(L)(THF)₂ with L = O,O′-C₁₂H₆N₂O₂ or O,O′-C₁₄H₈O₂ allowed a direct comparison of the coordination properties of 9,10-phenanthrenequinone and 1,10-phenanthroline-5,6-dione to be made. Dinuclear compounds of general formula CrCl₂(THF)₂(O,O′-C₁₂H₆N₂O₂-N,N′)MX_nL_m, M = Zr, 7, X = Cl, n = 4, m = 0; M = Cr, 8, X = Cl, n = 2, L = THF, m = 2; M = Fe, 9, Co, 10, X = Cl, n = 2, m = 0; M = Ni, 11, X = Br, n = 2, m = 0, are prepared from 2 and the corresponding metal halide, while VCp₂(O,O′-C₁₂H₆N₂O₂-N,N′)FeCl₂, 12, is synthesized by reacting 4 with VCp₂. The electronic properties of the different complexes are investigated by magnetic moment measurements and EPR spectroscopy.     

Stabilization of dimethyliron(II) and methylcobalt(I) complexes bearing a hemilabile 2-benzoylpyridine ligand in octahedral and square-pyramidal coordination

Octahedral cis-Fe(CH₃)₂{2-(benzoyl)pyridyl-N,O}(PMe₃)₂ (1), square-pyramidal Co(CH₃){2-(benzoyl)pyridyl-N,O}(PMe₃)₂ (2), and triangular-planar Ni{2-(benzoyl)pyridyl-η²-C,O}(PMe₃)₂ (3) have been synthesized by reaction of 2-benzoylpyridine with thermally labile Fe(CH₃)₂(PMe₃)₄ and Co(CH₃)(PMe₃)₄ complexes. With Ni(CH₃)₂(PMe₃)₃, reductive elimination of ethane is observed when a η²-C,O-coordination is constituted. The complexes were investigated by NMR spectroscopic methods and the molecular structures of 1 and 2 were determined by X-ray crystallography.     

融合酵母对重金属Cr的富集机理

研究了1株高效融合酵母对Cr的富集机理及其微观结构变化.研究结果表明,融合酵母对Cr6+的还原、吸附过程伴随着溶液H+离子的消耗.菌体表面的络合基团主要有氨基、羟基、磷酸基等,其中磷酸基团对吸附的影响最大,该基团屏蔽后总Cr去除率及Cr6+还原率分别降低了70%和46%;吸附过程趋向于将表面络合的Cr运输至细胞内并和细胞内物质形成更稳定的结合态,该过程可在吸附90min内达到平衡;Cr在细胞表面的吸附及还原作用会改变细胞微观结构,使细胞通透性增强.     

Some effects of nickel toxicity on rye grass

Summary Rye grass (Lolium perenne, cv.S-23) was grown for 4 weeks in a non-calcareous Seaton loam soil with varying amounts of Ni as NiSO₄. The purpose of this investigation was to study the Ni toxicity and the relationship of Ni with other essential elements. Nickel depressed shoot yield at all levels except at the lowest levelviz 30 g Ni/g soil. Nickel concentration of 50 g/g in shoots did not reduce the dry matter production in rye grass although slight chlorosis did appear at this level. The Ni and Fe concentration of the shoots increased and that of Mn and Zn decreased with increasing rates of Ni application. Uptake of Mn and Zn decreased at all level of Ni. But Fe uptake showed a slight increase at the first two levels and a profound depression at the subsequent levels. The pattern of Ni uptake is different, being highest at the middle level and decreasing on both sides which showed that the increase of Ni concentration of shoots is not proportional to the reduction in the yield. The Ni–Fe ratio rather than Ni and Fe concentration in plants has shown better relationship with the toxic effects of Ni. The implications of Ni phytotoxicity are discussed with particular reference to serpentine soils.The work is a part of Ph.D. Thesis submitted to the University of Aberdeen, U.K.     

Coordination chemistry of substituted [1,2,4]triazolo[1,5-a]pyrimidines with first-row transition-metal ions: Synthesis, spectroscopy and single-crystal structure analysis

A number of new coordination compounds with transition-metal salts and triazole-based heterocyclic ligands is described. The ligands used are disubstituted [1,2,4]triazolo[1,5-a]pyrimidines, with as substituents: ethyl, methyl and phenyl, and in addition a 2-methylthio-dimethyl ligand was used (sdmtp). To determine the structures of the coordination compounds in a number of cases 3D crystal structure determinations have been carried out, i.e. for [Fe(NCS)₂(detp)₃(H₂O)], [Co(NCS)₂(sdmtp)₂(H₂O)], [ZnBr₂(fmtp)₂], [Ni(NCS)₂(detp)₃(CH₃OH)] and [Fe(NCS)₂(fmtp)₂(H₂O)₂](fmtp). The latter compound is quite unusual as it contains an uncoordinated fmtp ligand in the crystal lattice with special packing features. The ligands and the coordination compounds have been further characterized by NMR, IR and LF spectra, as well as by C, H, N element analyses. The coordination around the metal varies from 4 (Zn), via 5 (Co) to 6 (for Ni and Fe).     

Three-dimensional iron-series coordination networks based on antiferromagnetic and ferromagnetic dinuclear motifs with mixed carboxylate and aqua bridges

Three coordination polymers of the iron-series transition metal ions with 4-(3-pyridyl)benzoic acid (4,3-Hpybz) ligand were synthesized and structurally and magnetically characterized. They have the formulas [M₂(4,3-pybz)₄(H₂O)] (M = Fe, 1; Co, 2; and Ni, 3). In these isomorphous compounds, octahedrally coordinated metal ions are linked by the mixed (μ-syn, syn-COO)₂(μ-H₂O) triple bridges to give dinuclear motifs, which serves as tetrahedral building units and are further linked by 4,3-Hpybz to give rise to diamond networks. Magnetic studies demonstrated that the (COO)₂(H₂O) triple bridges induce antiferromagnetic coupling between metal ions in 1 and 2, but compound 3 with the same mixed triple bridges exhibits ferromagnetic coupling, which may be related to orbital countercomplementarity.     

Chromium and nickel tolerance of Trema orientalis (Blume) L. in tissue culture

Callus of Trema orientalis derived from both contaminated and uncontaminated sources were tested in vitro for their relative tolerance to chromium and nickel. The calluses derived from contaminated source were metal-tolerant and showed better growth than those obtained from uncontaminated plants. The specificity of metal tolerance shown by the parent material was maintained in the calluses. Compared to the uncontaminated explants, the calli derived from contaminated sources exhibited higher catalase and peroxidase activities but a reduced acid phosphatase activity. Biochemical studies, provided evidence that the contaminated sources were physiologically distinct from the uncontaminated ones. Thus, this study indicated that seeds of Trema orientalis collected from contaminated sites were tolerant to chromium and nickel, and may have the advantage of being used in sustainable revegetation programmes on chromiferous minewastes.     

New nickel complexes with an S4 coordination sphere; synthesis, characterization and reactivity towards nickel and iron compounds

Three new nickel complexes have been synthesized with the ligands Hbss (4-mercapto-2-thia-1-butylbenzene) and Hbsms (2-(benzylsulfanyl)-2-methyl-1-propanethiol). [Ni(bss)₂] is a mononuclear complex with an S₄ coordination environment. [Ni₃(bss)₄](BF₄)₂ and [Ni₃(bsms)₄](BF₄)₂ are linear trinuclear complexes that can be synthesized either directly from the ligands Hbss and Hbsms in a reaction with Ni(BF₄)₂, or via the mononuclear complexes [Ni(bss)₂] and [Ni(bsms)₂] in a reaction with Ni(BF₄)₂. These reactions have been monitored with ligand field spectroscopy. Crystals suitable for X-ray diffraction were obtained for [Ni₃(bss)₄](BF₄)₂. The complex crystallizes in the space group P2₁/c. The nickel centers are in a square-planar environment; two peripheral nickel centers with an S₂S₂^′ (S=thiolato; S^′=thioether) coordination environment and the central nickel ion with an S₄ coordination environment.The mononuclear nickel complexes [Ni(bss)₂] and [Ni(bsms)₂] were reacted with FeCl₂, resulting in the hetero-tetranuclear nickel-iron complexes [Ni(bss)₂FeCl₂]₂ and [Ni(bsms)₂FeCl₂]₂. All complexes were characterized by analytical and spectroscopic methods.     

Effect of nickel on nutrient removal by selected indigenous protozoan species in wastewater systems

Nutrient and heavy metal pollutions are major concern worldwide. This study aimed at comparing the effect of Ni²⁺ on nutrient removal efficiency of four indigenous wastewater protozoan species (Aspidisca sp., Paramecium sp., Peranema sp., Trachelophyllum sp.). Specific physicochemical parameters and microbial growth/die-off were measured using standard methods. The results revealed that protozoan species were able to simultaneously remove phosphate, nitrate and Ni²⁺ at concentrations ranging between 66.4–99.36%, 56.19–99.88% and 45.98–85.69%, respectively. Peranema sp. appeared to be the isolates with the highest removal of nutrients (Phosphate-99.36% and Nitrate-99.88%) while Paramecium sp. showed higher removal of Ni²⁺ at 85.69% and low removal of nutrients. Aspidisca sp. was the most sensitive isolate to Ni²⁺ but with significant nutrient removal (Phosphate-66.4% and Nitrate-56.19%) at 10 mg-N²⁺/L followed by an inhibition of nutrient removal at Ni²⁺ concentration greater than 10 mg/L. Significant correlation between the growth rate and nutrient removal (r = 0.806/0.799, p < 0.05 for phosphate and nitrate, respectively) was noted. Except for Peranema sp. which revealed better nutrient removal ability at 10 mg-Ni²⁺/L, an increase in Ni²⁺ concentration had a significant effect on nutrient removal efficiency of these indigenous protozoan species. This study suggests that although Ni²⁺ appeared to be toxic to microbial isolates, its effect at a low concentration (10 mg-Ni²⁺/L) towards these isolates can be used to enhance the wastewater treatment process for the removal of nutrients. Peranema sp., which was able to remove both Ni²⁺ and nutrients from wastewater mixed-liquor, can also be used for bioremediation of wastewater systems.     

The interaction of biological and noxious transition metals with the zinc probes FluoZin-3 and Newport Green

Zinc-sensitive fluorescent probes have become increasingly important in the investigation of the cellular roles of zinc. There is, however, little information on how the other transition metals in cells may influence the measurement of zinc. We have characterized in vitro the interaction of the nominal zinc indicators FluoZin-3 and Newport Green with all the cationic transition metals found within cells, Cr, Mn, Fe, Co, and Cu, as well as Ni and Cd, by measuring their dissociation constants. In addition, we have shown how FluoZin-3 can be used to quantify the concentration of copper in a cell-free assay and report that the fluorescence of Newport Green is boosted by both Cu(I) and Fe(II). Furthermore, we have introduced diagnostics for detecting the interference of metals other than zinc with its measurement within cells.     

Cobalt(II), nickel(II) and zinc(II) do not bind to intra-helical N(7) guanine positions in the B-form crystal structure of d(GGCGCC)

Three novel X-ray crystal structures for the DNA hexamer d(GGCGCC) in the B-form complexed to divalent cobalt, nickel and zinc ions have been determined to a resolution of 2.9–3.0 Å. The structures were isomorphous and had five DNA strands and five metal cations per asymmetric unit. In all three cases, divalent metal cations were coordinated only to the terminal guanine residue at the N(7) position, with no metal ions binding to non-terminal guanine positions. Water molecules bound to the metal cations interacted with neighboring guanine residues 3 to the ones to which the cations were coordinated, affecting the propeller twist. Even though DNA occupied only about 35% of the unit cell volume, it is interesting that the few interactions involving the metal cations were sufficient to stabilize the crystal lattice. As well as lending support to the proposal that these metals do not coordinate to B-DNA in a stable manner, the results presented here also extend the crystallographic evidence for this phenomenon to the GGC and CGC sequences for all three metal cations.Electronic Supplementary Material Supplementary material is available for this article if you access the article at . A link in the frame on the left on that page takes you directly to the supplementary material.Abbreviations MPD 2-methyl-2,4-pentanediol - TAPS N-[tris(hydroxymethyl)methyl]-3-aminopropanesulfonate     

Structural and spectroscopic comparison of five-coordinate cobalt(II) and nickel(II) thiolato complexes with the related four-coordinate complexes

Five-coordinate thiolato complexes, [L1M(SMeIm)] (M = Co and Ni) (L1 = hydrotris(3,5-diisopropyl-1-pyrazolyl)borate anion and HSMeIm = 2-mercapto-1-methylimidazole), were synthesized. These complexes were compared with the corresponding Cu(II) and Zn(II) complexes with the same ligands and were also compared with the related four-coordinate complexes [L1M(SC₆F₅)] (HSC₆F₅ = pentafluorobenzenthiol). All the complexes were characterized by X-ray crystallography and UV-Vis absorption, IR, ¹H NMR, and other spectroscopic techniques. All five-coordinate thiolato complexes, [L1M(SMeIm)] (M = Co, Ni, and Cu), form a distorted square pyramidal structure with a high spin state, and only [L1Zn(SMeIm)] takes a four-coordinate structure with a distorted tetrahedral configuration. The N21-M-S bond angles of the obtained five-coordinate complexes were proportional to the corresponding d value, which comes from between the equatorial basal plane with N4S ligand donor sets and metal ion. These observations and M-S bond distances affect on UV-Vis and far-IR spectral behavior.     

The Escherichia coli metallo-regulator RcnR represses rcnA and rcnR transcription through binding on a shared operator site: Insights into regulatory specificity towards nickel and cobalt

RcnA is an efflux pump responsible for Ni and Co detoxification in Escherichia coli. The expression of rcnA is induced by Ni and Co via the metallo-regulator RcnR. In the present work, the functioning of the promoter-operator region of rcnR and rcnA was investigated using primer extension and DNAse I footprinting experiments. We show that the promoters of rcnR and rcnA are convergent and that apo-RcnR binds on symmetrically located sequences in this intergenic region. Moreover, RcnR DNA binding is specifically modulated by one Ni or Co equivalent and not by other metals. In addition to rcnA, RcnR controls expression of its own gene in response to Ni and Co, but the two genes are differentially expressed.     

Accumulation, distribution and toxicology of dietary nickel in lake whitefish (Coregonus clupeaformis) and lake trout (Salvelinus namaycush)

An 18-day experiment was conducted to investigate the uptake and sublethal toxicity of dietary Ni in adult lake whitefish (LWF, Coregonus clupeaformis) and lake trout (LT, Salvelinus namaycush) fed diets containing 0, 1000 and 10000 microg Ni/g, prepared with and without brine shrimp. The results of this experiment were used to design an experiment of longer duration in which one of the fish species was selected and exposed to lower dietary Ni doses. In the present study feed refusal was observed in LT and LWF fed 10000 microg Ni/g, after three and 4-5 feedings, respectively. LT fed Ni-contaminated diets exhibited different patterns of Ni accumulation than LWF. Increased Ni concentrations in all LWF tissues, except the intestine, were associated with increased doses of Ni. Copper and Zn concentrations in kidney and liver of LWF were altered. Metallothionein concentrations in kidneys of LT fed 1000 microg Ni/g and 10000 microg Ni/g and LWF fed 10000 microg Ni/g and in livers of LWF fed 10000 microg Ni/g (diet without shrimp only) increased significantly. Increased lipid peroxide production in the plasma of LT fed 10000 microg Ni/g was observed. Blood glucose and electrolytes were affected by Ni exposure. Histopathological alterations were observed in kidneys of LWF fed low and high dose diets, livers of whitefish fed high dose diets, and intestines of LWF fed high dose diets and LT fed low and high dose diets. LT fed high dose diets exhibited significant decreases in weight.     

Nickel sulfide, iron-nickel sulfide and iron sulfide precipitation by a newly isolated Desulfotomaculum species and its relation to nickel resistance

Abstract A Desulfotomaculum sp. (DF-1) isolated from a sulfate reduction bioremediation pilot plant in Chengdu (P.R.C.) was resistant to 360 (6.1 mM), 450 (7.7 mM), and 550 ppm (9.4 mM) Ni(II) in the presence of 0, 100 (1.8 mM), and 200 ppm (3.6 mM) Fe(II), respectively. When cultured in the presence of Ni (II) with or without Fe, DF-1 produced a dark-brown, soluble product. Only small amounts of Ni and or Fe were precipitated at the cell surface when cells were subjected to 100 ppm concentrations of the metals. However, in the presence of Fe(II) only, large amounts of FeS (70% of the Fe) were precipitated at the bacterial cell surface and extracellularly. The increase of Ni in the growth medium was inversely related to the concentration of Fe precipitated as a sulfide. This coincided with the formation of dark-brown, soluble Ni-proteins, consisting of a range of polypeptides from approx. 70–120 kDa, which inhibited NiS formation and promoted Fe-complexation. These autolysis-inducible proteins and cell wall autolysis by-products bound Ni, and are thought to confer Ni-resistance in DF-1. Harsh treatments, such as acidification of culture supernatants from Ni-grown DF-1, destabilized the Ni-organic complexes, and resulted in the precipitation of an amorphous Ni-rich material.     

[S2], [S3], and [N3] coordination modes of hydrotris(thioxotriazolyl)borato. Zinc, nickel, cobalt, and bismuth complexes

The ligand hydrotris(1,4-dihydro-3-methyl-4-phenyl-5-thioxo-1,2,4-triazolyl)borato (Tr^Ph,Me) was synthetized as natrium salt and the complexes [Zn(Tr^Ph,Me)₂] · 7.5H₂O · 1.5CH₃CN (2a), [Zn(Tr^Ph,Me)₂] · 8DMF (2b), [Co(Tr^Ph,Me)₂] · 8DMF (3a), [Ni(Tr^Ph,Me)₂] · H₂O · 6DMSO (4a), [Bi(Tr^Ph,Me)₂]NO₃ (5), have been isolated and structurally characterized by X-ray diffraction. In the zinc derivatives the ligand adopts different denticity and coordination modes, η² and [S₂] for 2a and η³ and [N₃] for 2b, depending on the crystallization solvent, giving rise to tetrahedral and octahedral geometry, respectively. In the octahedral cobalt and nickel complexes the ligand is η³ and [N₃] coordinated whereas in the bismuth complex the η³ and [S₃] coordination is exhibited.