Impending conservation crisis for Southeast Asian amphibians

With an understudied amphibian fauna, the highest deforestation rate on the planet and high harvesting pressures, Southeast Asian amphibians are facing a conservation crisis. Owing to the overriding threat of habitat loss, the most critical conservation action required is the identification and strict protection of habitat assessed as having high amphibian species diversity and/or representing distinctive regional amphibian faunas. Long-term population monitoring, enhanced survey efforts, collection of basic biological and ecological information, continued taxonomic research and evaluation of the impact of commercial trade for food, medicine and pets are also needed. Strong involvement of regional stakeholders, students and professionals is essential to accomplish these actions.     

海南尖峰岭中华穿山甲的分布与保护现状

中华穿山甲(Manis pentadactyla)是国家I级重点保护野生动物, 被IUCN红色名录列为极危(CR)物种, 也被列入CITES附录I。分布现状信息的匮乏是制约该物种保护规划制定与保护行动开展的关键因素。本文利用红外相机陷阱法和样线调查法, 于2020年8月至2021年11月在海南尖峰岭林区进行中华穿山甲海南亚种(M. p. pusilla)的监测调查, 分析评估了其分布与保护现状。调查发现: (1)尖峰岭林区7个公里网格内的8台红外相机拍摄到10次中华穿山甲出没的影像, 且在11个网格内见到35个觅食洞穴, 其中在红外相机损失率较低的南中区域记录到的中华穿山甲实体数量和洞穴数最多; (2)中华穿山甲主要分布于尖峰岭林区400-1,000 m海拔区域, 林区的国家公园一般控制区内仍然有3台红外相机拍摄到中华穿山甲及调查记录到18个觅食洞穴。结果表明: 海南尖峰岭林区仍然存在中华穿山甲种群, 目前可能被海拔等因素隔离为3个小种群; 人为干扰是影响该物种种群恢复的重要因素之一。因此, 本文提出如下建议: (1)管理部门要落实各项管护制度并加强巡护管理力度以把人为干扰程度降到最低; (2)管理部门在今后国家公园总体规划调整时可将有中华穿山甲等极危物种分布的一般控制区调整为核心保护区, 而在未调整规划前则要重点加强该区域的管理, 对建设项目布局等要尽量避开该区域; (3)尽快开展尖峰岭林区中华穿山甲的生境适宜性分析及廊道研究, 以使该物种得到更有效的保护和管理; (4)今后要定期开展其监测与保护研究, 明确尖峰岭林区中华穿山甲种群数量的动态变化; (5)在海南岛范围内开展中华穿山甲资源调查, 明确该物种在海南的种群数量及分布等情况。     

Mapping of a rare plant species (Boronia deanei) using hyper‐resolution remote sensing and concurrent ground observation

Boronia deanei is one of many declared rare, and potentially threatened, species of the Australian flora that occur within freshwater swamps and riparian margins. However, a lack of knowledge regarding its ecological distribution and habitat requirements may result in vulnerability to current and planned anthropogenic activities. Identification of population boundaries, numbers and locations should be highly beneficial for developing appropriate conservation approaches. This study demonstrates (i) the potential of converging hyper‐resolution remote sensing imagery with targeted ground observations to identify individual population extents and densities and (ii) proposes methods of defining and mapping suitable habitat and potential extents for rare plant species in areas potentially exposed to multiple anthropogenic impacts.     

What Determines Habitat Quality for a Declining Woodland Bird in a Fragmented Environment: The Grey-Crowned Babbler Pomatostomus temporalis in South-Eastern Australia?

Understanding what constitutes high quality habitat is crucial for the conservation of species, especially those threatened with extinction. Habitat quality frequently is inferred by comparing the attributes of sites where a species is present with those where it is absent. However, species presence may not always indicate high quality habitat. Demographic parameters are likely to provide a more biologically relevant measure of quality, including a species’ ability to successfully reproduce. We examined factors believed to influence territory quality for the grey-crowned babbler (Pomatostomus temporalis), a cooperatively breeding woodland bird that has experienced major range contraction and population decline in south-eastern Australia. Across three broad regions, we identified active territories and determined the presence of fledglings and the size of family groups, as surrogates of territory quality. These measures were modelled in relation to habitat attributes within territories, the extent of surrounding wooded vegetation, isolation from neighbouring groups, and the size of the neighbourhood population. Fledgling presence was strongly positively associated with group size, indicating that helpers enhance breeding success. Surprisingly, no other territory or landscape-scale variables predicted territory quality, as inferred from either breeding success or group size. Relationships between group size and environmental variables may be obscured by longer-term dynamics in group size. Variation in biotic interactions, notably competition from the noisy miner (Manorina melanocephala), also may contribute. Conservation actions that enhance the number and size of family groups will contribute towards reversing declines of this species. Despite associated challenges, demographic studies have potential to identify mechanistic processes that underpin population performance; critical knowledge for effective conservation management.     

The relationships between habitat suitability,population size and body condition in a pond-breeding amphibian

The ecological niche of a species determines whether a species can persist and reproduce in a patch or not. The niche of a species is often described using habitat suitability models and indices. Accordingly, one may expect tight links between demography, phenotypes of individuals, population size, and habitat suitability. However, such links are not always found. Here, we study the relationship between a habitat suitability index that is commonly used for conservation assessments and metrics describing the performance at the level of populations and individuals. Using data from a metapopulation of a pond-breeding amphibian, the Great Crested Newt (Triturus cristatus), we show that habitat suitability predicts population size but not body condition. Ponds with higher suitability had a higher population size of newts, whereas population size correlated negatively with body condition of individuals. Our results are in line with previous studies showing no straightforward relationship between habitat suitability and body condition (a measure of individual performance) and the performance of populations. We suggest that a population size-dependent reduction of body condition may be a regulatory mechanism in newt populations.     

Conservation targets for viable species assemblages?

Estimates of minimum areas required for effective biodiversity conservation differ substantially. Scientific reserve design and placement procedures indicate that between 30 and 75% of any region may be required to sample biodiversity features. These estimates do not routinely incorporate measures for sampling viable populations of species or explore the area requirements of sampling viable populations of species assemblages. To determine the area requirements for sampling viable populations of a herbivore assemblage, spatially explicit abundance data from the Kruger National Park, South Africa, were analyzed. Area requirements were consistently above 50% and were unaffected by selected target population sizes. In addition, area requirements appeared to be insensitive to selection unit size (analytical grain), habitat quality, the coarseness of the land classification system used or the presence of low-density species. Thus, traditional conservation area targets of 10–15% appear inadequate for representing viable populations of a herbivore assemblage from African savanna regions. This suggests that conservation targets of at least 50% of land classification units may represent a more appropriate conservation rule of thumb, or alternatively, that the use of data independent conservation targets may need to be abandoned.     

Crosses between frog populations reveal genetic divergence in larval life history at short geographical distance

A number of studies have documented interpopulation divergence in amphibian larval life-history traits across latitudes. Because many frogs are philopatric and have a patchy habitat distribution, genetic divergence could also exist on a much smaller geographical scale, revealed by recent estimates of population divergence using molecular markers. Whether this divergence is reflected in phenotypic traits is virtually unknown. Using artificial fertilization, individuals of the common frog, Rana temporaria , were crossed from two populations situated 130 km apart and differing in population size. The pattern of size at metamorphosis showed evidence of non-additive effects, as demonstrated by a significant interaction between male and female population of origin. Outbreeding resulted in an increase in metamorph size when eggs from the small population were fertilized with sperm from the large population. In the reciprocal cross, however, the pattern was in the opposite direction, with no significant effect of male population of origin. Genetic divergence of populations separated by a relatively short geographical distance may be more common in frogs than previously acknowledged, with potential implications for conservation of declining amphibian species.  © 2006 The Linnean Society of London, Biological Journal of the Linnean Society , 2006, 89 , 189–195.     

A metapopulation paradox: partial improvement of habitat may reduce metapopulation persistence

The adverse influence of habitat degradation on the survival of populations may sometimes be amplified by rapid evolution over ecological timescales. This phenomenon of "evolutionary suicide" has been described in theoretical as well as empirical studies. However, no studies have suggested that habitat improvement could possibly also trigger an evolutionary response that would result in a decline in population size. We use individual-based simulations to demonstrate the potential for such a paradoxical response. An increase in the quality, size, or stability of only a fraction of the habitat patches in a metapopulation may result in an evolutionary decline in the dispersal propensity of individuals, followed by a decrease in recolonization, a reduction in the number of patches occupied, a decline in overall population size, and even extinction. Thus, well-intended conservation efforts that ignore potential evolutionary consequences of habitat management may increase the extinction risk of populations.     

Assessing multi-taxa sensitivity to the human footprint,habitat fragmentation and loss by exploring alternative scenarios of dispersal ability and population size: a simulation approach

Quantifying the effects of landscape change on population connectivity is compounded by uncertainties about population size and distribution and a limited understanding of dispersal ability for most species. In addition, the effects of anthropogenic landscape change and sensitivity to regional climatic conditions interact to strongly affect habitat fragmentation and loss. To further develop conservation theory and to understand the interplay between all of these factors, we simulated habitat fragmentation and loss across the Western United States for several hypothetical species associated with four biome types, and a range of habitat requirements and dispersal abilities. We found dispersal ability and population size of the focal species to be equally sensitive to habitat extent, while dispersal ability is more sensitive to habitat fragmentation. There were also strong critical threshold effects where habitat connectivity decreased disproportionately to decreases in life-history traits making these species near these thresholds more sensitive to changes in habitat loss and fragmentation. Overall, grassland and forest associated species are also most at risk from habitat loss and fragmentation driven by human related land-use. These two largest biome types were most sensitive at large contiguous patch sizes which is often considered most important for metapopulation viability and biodiversity conservation. Hypothetical simulation studies such as this can be of great value to scientists in further conceptualizing and developing conservation theory, and evaluating spatially-explicit scenarios of habitat connectivity. Our results are available for download in a web-based interactive mapping prototype useful for accessing the results of this study.     

Gaps in mammal conservation in China: An analysis with a framework based on minimum area requirements

Climate change, habitat loss, and human disturbance are major threats to biodiversity. Protecting habitats plays a pivotal role in biodiversity conservation, and there is a global imperative to establish an effective system of protected areas (PAs) to implement habitat conservation and halt biodiversity decline. However, the protected patch size of habitat for a species is just as important for biodiversity conservation as the expansion of areas already under protection. In China, conservation management is often carried out based on administrative divisions. Therefore, here, an analytical conservation management framework was developed based on administrative divisions to assess whether the current network of PAs can effectively meet species' conservation needs using the minimum area requirements (MARs) of species as criteria for medium and large-sized mammals in China. This study found that the MAR of medium and large-sized mammals was larger in the northwest and smaller in the southeast, while taking the Hu line as the dividing line. Precipitation seasonality, elevation, annual mean temperature, and annual precipitation are the main environmental factors driving the distribution of a species MAR. Compared with MAR for each species, the maximum protected patch size of habitat is severely undersized in most provinces where those species primarily distribute, and this is particularly true for large carnivores and threatened species. The densely populated provinces of eastern China are particularly affected by this. The present study's framework can identify the provinces needing to expand PAs or implement other effective area-based conservation measures and habitat restoration. This analytical framework is also relevant for biodiversity conservation in different taxa and regions around the globe.     

High interindividual variability in habitat selection and functional habitat relationships in European nightjars over a period of habitat change

An animal's choice of foraging habitat reflects its response to environmental cues and is likely to vary among individuals in a population. Analyzing the magnitude of individual habitat selection can indicate how resilient populations may be to anthropogenic habitat change, where individually varying, broadly generalist populations have the potential to adjust their behavior. We collected GPS point data from 39 European nightjars (Caprimulgus europaeus) at a UK breeding site where restoration measures have altered large areas of habitat between breeding seasons. We calculated individual habitat selection over four breeding seasons to observe changes that might align with change in habitat. We also analyzed change in home range size in line with change in habitat availability, to examine functional relationships that can represent trade‐offs made by the birds related to performance of the habitat. Individual explained more of the variation in population habitat selection than year for most habitat types. Individuals differed in the magnitude of their selection for different habitat types, which created a generalist population composed of both generalist and specialist individuals. Selection also changed over time but only significantly for scrub habitat (60% decrease in selection over 4 years). Across the population, individual home range size was 2% smaller where availability of cleared habitat within the home range was greater, but size increased by 2% where the amount of open water was higher, indicating the presence of trade‐offs related to habitat availability. These results highlight that using individual resource selection and specialization measures, in conjunction with functional responses to change, can lead to better understanding of the needs of a population. Pooling specialist and generalist individuals for analysis could hide divergent responses to change and consequently obscure information that could be important in developing effective conservation strategies.     

An Assessment of Habitat Diversity and Transformation on La Réunion Island (Mascarene Islands,Indian Ocean) as a Basis for Identifying Broad-scale Conservation Priorities

Most natural habitat in the Mascarene Islands (Mauritius, La Réunion and Rodrigues) has been transformed. Although urbanisation, agriculture and alien plant invasions have transformed large areas in La Réunion, the island has by far the greatest area of intact habitats in the Mascarenes, but remaining natural areas are under threat. We propose a protocol for defining a system of habitat types and for using these to provide a preliminary assessment of conservation priorities for La Réunion. The protocol draws on existing data and expert knowledge to map habitat types, assesses the extent of habitat transformation, and quantifies heterogeneity between habitat types based on climate, topography and geology. The pattern of habitat transformation was uneven among the nineteen habitat types identified. While three habitats have lost > 95% of their original area, four still retain> 80% of their original extent. Habitat types could be grouped into the following categories: (i) transformed habitats with low levels of plant endemism, (ii) habitats confined to homogenous geology with high levels of plantendemism, and (iii) species-rich heterogeneous habitats on diverse geological types. Priority habitats were also identified using municipalities as a basis for implementation. Urgent action is required for several habitat types where a large part of the original extent has been transformed. Three municipalities which contain more than 10 habitat types should receive conservation priority. The analysis provides the basis for setting conservation priorities in La Réunion at the regional and local scale. Implications of the results are discussed with reference to requirements for finer-scale conservation planning.     

Differential effects of spatial network structure and scale on population size and genetic diversity of the ninespine stickleback in a remnant wetland system

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Discrepancies in occupancy and abundance approaches to identifying and protecting habitat for an at‐risk species

Predicting how environmental factors affect the distribution of species is a fundamental goal of conservation biology. Conservation biologists rely on species distribution and abundance models to identify key habitat characteristics for species. Occupancy modeling is frequently promoted as a practical alternative to use of abundance in identifying habitat quality. While occupancy and abundance are potentially governed by different limiting factors operating at different scales, few studies have directly compared predictive models for these approaches in the same system. We evaluated how much occupancy and abundance are driven by the same environmental factors for a species of conservation concern, the greater short‐horned lizard (Phrynosoma hernandesi). Occupancy was most strongly dictated by precipitation, temperature, and density of ant mounds. While these factors were also in the best‐supported predictive models for lizard abundance, the magnitude of the effects varied, with the sign of the effect changing for temperature and precipitation. These discrepancies show that while occupancy modeling can be an efficient approach for conservation planning, predictors of occupancy probability should not automatically be equated with predictors of population abundance. Understanding the differences in factors that control occupancy versus abundance can help us to identify habitat requirements and mitigate the loss of threatened species.     

动物的易绝灭特征与保护优先性

各种人为干扰和自然因素促使大量物种走向濒危和绝灭。物种濒危和绝灭不是随机的。具有某些特征的物种容易濒危和绝灭 ,即易绝灭特征。易绝灭特征包括个体大 ,繁殖力低 ,扩散能力弱 ,营养级高 ,家域大 ,种群小 ,种群波动大 ,分布范围窄 ,种群密度低 ,栖息地特化程度高和特殊栖息地类型等。研究物种的易绝灭特征可以为生物多样性提供预防性 (proac tive)的优先保护措施。尽管物种的易绝灭特征已经用于实际的物种保护中 ,然而由于物种的各种特征对物种濒危和绝灭的影响十分复杂 ,各个易绝灭特征还有待于进一步深入的、准确的研究。探讨适合不同类群和不同地区物种的易绝灭特征是十分必要的。由于特殊地史发育、中医药传统和边境频繁的非法野生动物贸易 ,我国动物的濒危模式可能与国外有所不同。     

Strong territoriality and weak density‐dependent reproduction in Lesser Spotted Eagles Clanga pomarina

We assessed whether populations of the migratory, philopatric, territorial Lesser Spotted Eagle Clanga pomarina are regulated through territoriality and density‐dependent reproduction rates. In the north‐western part of the distribution to the east of the Baltic Sea, territories were spaced regularly and consistently between years. We did not find strong support for an improvement of reproductive output with an increase in distance to the nearest neighbour or with a decrease of the number of conspecifics within a 2‐km radius around nest‐sites. Eagles differed greatly in territory spacing across three studied geographical areas, but breeding performance did not follow the same pattern. Performance of birds at the northern limit of their distribution did not differ from that in an adjacent southern area. Moreover, breeding performance fluctuated synchronously across different geographical areas, perhaps indicating climatic spatial autocorrelation or trophic interactions with synchronous vole population fluctuations over large areas. Our data suggest population regulation through territoriality but do not identify density‐dependent breeding performance in this internationally protected raptor. Population density may be a good criterion for the selection of priority sites for conservation, but synchronous fluctuations in reproductive success over large geographical areas suggest that habitat conservation should similarly be focused at large scales.     

Functional habitat area as a reliable proxy for population size: case study using two butterfly species of conservation concern

Accurate estimates of population size are essential for effective conservation and restoration management of threatened species. Nevertheless, reliable methods to estimate population size, such as mark-release-recapture studies (MRR), are time and labour consuming and may generate negative impact(s) on both the habitats and organisms studied. This may complicate their use if several sites need to be studied concurrently. Consequently, there is a strong interest to develop reliable proxies of population size, e.g., to be used in Population Viability Analysis. Habitat area has often been used as an obvious proxy. For butterflies, many studies focused on the area of host plant patches, but resource-based definition of the habitat (i.e., the area containing the different ecological resources and conditions needed by the individuals) has recently gained much attention. Using two peat bog butterflies, we tested the reliability of these two measures of habitat area as proxies for population size by (1) predicting population sizes based on the product of larval habitat area by the number of emerged butterflies per spatial unit of habitat (eliminated by ground cover traps) and (2) comparing these predictions to accurate population size estimates inferred from MRR studies. Results on both species showed that: (1) adult population size was strongly related to larval habitat availability and quality when habitat was accurately defined according to functional resources, (2) resources other than the host plant have to be included in the habitat definition, (3) after careful control of its similarity, the resource-based habitat delineation can be reasonably well transferred among populations of the same species in a wider region.     

Habitat fragmentation disrupts the demography of a widespread native mammal

Fragmentation theory predicts that population persistence should be positively correlated with the size of habitat fragments. The patterns of occurrence of many species are consistent with this prediction, but the demographic processes that determine how species respond to fragmentation are poorly understood. In addition, habitat quality may interact with fragment size as an influence on demographic performance. We investigated these predictions for the native bush rat Rattus fuscipes by testing the following hypotheses: 1) population performance (i.e. viability as determined by various demographic parameters) is positively correlated with fragment size; and 2) population performance is positively correlated with habitat quality. Populations of R. fuscipes were censused in two large (>49 ha) and eight small (<2.5 ha) forest fragments in an agricultural region of southeastern Australia. Fragments with high and low quality habitat were included in each size category. Fragment size influenced multiple aspects of population demography; populations in large fragments had higher densities, older age structures, received more potential immigrants, and were more likely to recruit adults than those in small fragments. Reproductive patterns were more predictable in large fragments. Habitat quality per se had less marked effects; adult females were heavier and subadults more prevalent in fragments with high quality habitat. However, high quality habitat enhanced population performance in small fragments more so than in large ones. Despite being widespread in the study area, R. fuscipes populations are profoundly impacted by habitat fragmentation, with population performance declining with fragment size. Studies based on patterns of species occurrence should be interpreted with caution as they may mask critical processes occurring at the population level. For a thorough understanding of the effects of habitat fragmentation, population‐level studies are required.     

Bioenergy production and Skylark (Alauda arvensis) population abundance – a modelling approach for the analysis of land‐use change impacts and conservation options

Bioenergy production is seen as one way of meeting future energy needs. The growing demand for biomass for energy production induces the cultivation of a few fast growing and high‐yielding energy crops on vast areas of arable land. This land‐use change has been found associated with the reduction of habitat suitability for farmland birds and a decline in farmland biodiversity in general. A large number of studies have assessed the ecological effects of energy crop cultivation at the local scale of a single field. This study focuses on regional landscape changes caused by increased energy crop cultivation, which includes reduction of crop‐type richness and spatial concentration of single crop‐types. We present a spatially explicit ecological model to assess the population‐level consequences of these effects on the abundance of the farmland bird species Skylark (Alauda arvensis). We also investigate the impacts of different land‐use scenarios and aim to identify adaptive conservation options. We show that (1) the impacts of increased energy crop cultivation on Skylark population abundance depend strongly on the landscape structure; (2) impacts could be tolerated as long as a certain minimum level of crop‐type heterogeneity is retained at the landscape level and (3) conservation actions are required and effective especially on landscapes where crop‐field size is large.     

Integrated population monitoring of breeding birds in Britain and Ireland

Effective wildlife monitoring schemes identify changes in population variables that require conservation action. This must be based on an understanding of normal patterns of population variability. Monitoring schemes ideally provide data on the stages of the life cycle at which changes are taking place and indications of the probable causes of change.
The Integrated Population Monitoring Programme of the British Trust for Ornithology aims to fulfil these requirements for British birds. It encompasses existing BTO projects that measure population size, productivity and survival rates, principally the Common Birds Census, Waterways Bird Survey, Nest Record Scheme, Constant Effort (mist-netting) Sites Scheme and the Ringing Scheme. Integrated analyses of long-term BTO data are being used to study the population dynamics of individual species. Relationships established through such analyses will be used to construct models that will predict population performance, and against which observed performance can be compared.
A simple application of Integrated Population Monitoring is presented using data for the Song Thrush ( Turdus philomelos ), a species which has been declining throughout most of Britain since the mid 1970s. No reduction in reproductive performance was detected and the decline appears to have been brought about through reduced survival rates. Factors responsible for much of this decline were identified from a multiple regression model involving winter weather conditions.