Nuclear gene phylogeography reveals the historical legacy of an ancient inland sea on lineages of the western pond turtle,Emys marmorata in California

The historical biogeography of California’s taxa has been the focus of extensive research effort. The western pond turtle (Emys marmorata) is an example of a wide‐ranging taxon that spans several well‐known California diversity hotspots. Using a dataset comprised of one mitochondrial and five nuclear loci, we elucidate the major biogeographic patterns of the western pond turtle across the California landscape. By employing a combination of phylogenetic and network‐based approaches, we recovered a relatively ancient (c. 2–8 Ma) north/south split among populations of E. marmorata and find an area of intergradation centred in the Central Coast Ranges of California. In addition, discordant mitochondrial/nuclear genetic patterns suggest subsequent gene flow from northern populations and from San Joaquin Valley populations into the Central Coast Ranges after the Pliocene‐Pleistocene marine embayment of the Great Central Valley subsided. Our results emphasize the utility of nuclear DNA phylogeography for recovering the impact of relatively ancient biogeographic events, and suggest that the Central Coast Ranges of California have played a major role in the geographic structuring of the western pond turtle, and possibly other co‐distributed taxa.     

Tracing the invasion history of mealy plum aphid, Hyalopterus pruni (Hemiptera: Aphididae), in North America: a population genetics approach

Biological invasions are typically the outcome of complex patterns of introduction, establishment, and spread, and genetic methods are excellent tools to resolve such histories for non-native organisms. The mealy plum aphid, Hyalopterus pruni, is an invasive pest of dried plum in California. We examined nine microsatellite loci and DNA sequences from three mitochondrial genes (1,148 bp) in populations throughout the native and invaded ranges of H. pruni to assess key invasion parameters, including geographic origins of invasive populations, number of introductions, and levels of genetic diversity and gene flow. Our results provide evidence for multiple invasions of H. pruni into North America, suggesting that aphids in California may have been introduced from Spain, and aphids in the eastern United States and Vancouver, Canada were likely introduced from central or northern Europe. H. pruni populations in California were characterized by low genetic diversity relative to native populations, while the two other North American populations were less genetically impoverished. Gene flow among introduced populations was low, but does appear to occur with some regularity. These findings provide a framework for more detailed studies of H. pruni, but also represent a model for how population genetics approaches can be used to study invasion biology and aid the development of optimized management methods for agricultural pests. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

PCR-based,rapid diagnosis of parasitism of Lygus spp. (Hemiptera: Miridae) by Peristenus relictus (Hymenoptera: Braconidae)

Several species of Lygus (Heteroptera: Miridae: Mirini) are serious crop pests in North America where their parasitism rate by native nymphal parasitoids is generally lower than in Europe. Peristenus relictus (Ruthe) (formerly P. stygicus Loan) (Hymenoptera: Braconidae: Euphorinae) is the predominant nymphal parasitoid of several Lygus spp. in the warm Mediterranean region and has been a candidate for introduction against Lygus hesperus Knight and L. lineolaris (Palisot de Beauvois) in the southern US. We report a rapid, sensitive, and specific PCR-based assay for diagnosis of P. relictus immature stages within Lygus nymphs that entails three steps: DNA extraction, PCR of the partial mitochondrial COI gene, and agarose gel electrophoresis. The PCR-based methodology is species-specific because the target DNA of other sympatric, congeneric species was not amplified with use of the primers developed for P. relictus diagnosis. The sensitivity of the PCR method, assessed through spike tests, was established by the detection of a ratio of 1:10,000 P. relictus DNA to Lygus DNA. Molecular diagnosis of parasitism of field collected nymphs is achievable in one day, eliminating the need to rear nymphs to obtain adult parasitoids for morphological identification.     

Ten polymorphic microsatellite loci for the endangered Buena Vista Lake shrew (Sorex ornatus relictus)

The ornate shrew (Sorex ornatus) is restricted to the vanishing wetlands of California, USA and Baja California, Mexico. Several subspecies of ornate shrews are considered ‘mammal species of special concern’ in California by the Department of Fish and Game, and one (Sorex ornatus relictus) has recently been listed as endangered. Populations of shrews around Buena Vista Lake have been diminished or extirpated due to habitat deterioration and human development. In order to study the patterns of genetic variation in isolated populations of Buena Vista Lake shrews, we developed 10 polymorphic microsatellite loci. There were 6–27 alleles per locus, and the loci had heterozygosity values that ranged from 20 to 80%. In addition, we screened 20 different populations of S. ornatus, eight species within two subfamilies of shrews (Soricinae and Crocidurinae), as well as in a mole (Talpidae, Neurotrichus gibbsii), to determine if these loci could be informative in other species as well.     

Genetic evidence for the persistence of the critically endangered Sierra Nevada red fox in California

California is home to both the native state-threatened Sierra Nevada red fox (Vulpes vulpes necator), which historically inhabited high elevations of the Sierra Nevada and Cascade mountains, and to multiple low-elevation red fox populations thought to be of exotic origin. During the past few decades the lowland populations have dramatically expanded their distribution, and possibly moved into the historic range of the native high-elevation fox. To determine whether the native red fox persists in its historic range in California, we compared mitochondrial cytochrome-b haplotypes of the only currently-known high-elevation population (n = 9 individuals) to samples from 3 modern lowland populations (n = 35) and historic (1911–1941) high-elevation (n = 22) and lowland (n = 7) populations. We found no significant population differentiation among the modern and historic high-elevation populations (average pairwise F _ST = 0.06), but these populations differed substantially from all modern and historic lowland populations (average pairwise F _ST = 0.52). Among lowland populations, the historic and modern Sacramento Valley populations were not significantly differentiated from one another (F _ST = −0.06), but differed significantly from recently founded populations in the San Francisco Bay region and in southern California (average pairwise F _ST = 0.42). Analysis of molecular variance indicated that 3 population groupings (mountain, Sacramento Valley, and other lowland regions) explained 45% of molecular variance (F _CT = 0.45) whereas only 4.5% of the variance was partitioned among populations within these groupings (F _SC = 0.08). These findings provide strong evidence that the native Sierra Nevada red fox has persisted in northern California. However, all nine samples from this population had the same haplotype, suggesting that several historic haplotypes may have become lost. Unidentified barriers have apparently prevented gene flow from the Sacramento Valley population to other eastern or southern populations in California. Future studies involving nuclear markers are needed to assess the origin of the Sierra Nevada red fox and to quantify levels of nuclear gene flow.     

EVOLUTIONARY AND HISTORICAL ANALYSIS OF PROTEIN VARIATION IN THE BLOTCHED FORMS OF SALAMANDERS OF THE ENSATINA COMPLEX (AMPHIBIA: PLETHODONTIDAE)

Geographic variation in 23 to 29 protein-encoding genetic loci was examined in 48 populations of the Ensatina complex, a “ring species” distributed around the Central Valley of California. The samples span two critical links in the chain of morphologically distinct units: the transition from the unblotched to blotched color pattern types in the vicinity of Lassen Peak, northeastern California, and a geographic gap in the range of the complex in the San Gabriel Mountains, southern California. A general pattern of isolation by distance with a regular buildup of genetic distance correlated with increases in geographic distance characterizes the populations studied, with the exception of a little-differentiated group of populations in the northern Sierra Nevada; this region is postulated to be a zone of genetic reticulation characterized by relatively high gene flow. An adaptively significant color pattern is thought to have spread into the northern Sierra Nevada from the south, but protein variants have been introduced both from the north and the south. Genetic distances across the San Gabriel Mountain gap match expectations from the pattern of buildup of genetic distance as a function of geographic distance elsewhere in the complex. A phylogenetic analysis of the protein data supports the reticulation hypothesis; whereas the southernmost populations currently do constitute a monophyletic assemblage, an “extinction experiment” demonstrates that the distinction could be the result of the recent extinction of populations in a present gap in our sampling. The Ensatina complex appears to be a dynamic entity representing several stages in the evolution of species. It is a ring species, and whereas various taxonomic arrangements are possible, no taxonomic changes are proposed.     

Use of life table statistics and degree-day values to predict the invasion success of Gonatocerus ashmeadi (Hymenoptera: Mymaridae), an egg parasitoid of Homalodisca coagulata (Hemiptera: Cicadellidae), in California

Life table statistics and degree-day requirements for Gonatocerus ashmeadi Girault, a parasitoid of the glassy-winged sharpshooter Homalodisca coagulata (Say), were used to estimate the number of expected parasitoid generations in California (USA). Between two to 51 and one to 37 generations per year were estimated across different climatic regions in California, using life table and degree-day models, respectively. Temperature-based values for net reproductive rate, R_o, were estimated in California using a laboratory-derived equation and ranged from zero to approximately 48 and analyses indicate that a minimum of eight generations are required each year to sustain a population increase of G. ashmeadi. Long-term weather data from 381 weather stations across California were used with an Inverse-Distance Weighting algorithm to map temperature-based estimations for the entire state of California. This Geographic Information Systems model was used to determine number of G. ashmeadi generations based on day-degree accumulation, T_c, and R_o. GIS mapping indicated that Californian counties in the north, central west coast, central west and Sierra Nevada regions may be climatic conditions unfavorable for supporting the permanent establishment of invading populations of G. ashmeadi should H. coagulata successfully establish year-round populations in these areas. Southern counties in California that experience warmer year round temperatures and support year round populations of H. coagulata, appear to be conducive to the establishment of permanent populations of G. ashmeadi. The mechanisms facilitating G. ashmeadi invasion and the implications of these temperature-based estimates for biological control of H. coagulata are discussed.     

Following the rivers: historical reconstruction of California voles Microtus californicus (Rodentia: Cricetidae) in the deserts of eastern California

The California vole, Microtus californicus, restricted to habitat patches where water is available nearly year‐round, is a remnant of the mesic history of the southern Great Basin and Mojave deserts of eastern California. The history of voles in this region is a model for species‐edge population dynamics through periods of climatic change. We sampled voles from the eastern deserts of California and examined variation in the mitochondrial cytb gene, three nuclear intron regions, and across 12 nuclear microsatellite markers. Samples are allocated to two mitochondrial clades: one associated with southern California and the other with central and northern California. The limited mtDNA structure largely recovers the geographical distribution, replicated by both nuclear introns and microsatellites. The most remote population, Microtus californicus scirpensis at Tecopa near Death Valley, was the most distinct. This population shares microsatellite alleles with both mtDNA clades, and both its northern clade nuclear introns and southern clade mtDNA sequences support a hybrid origin for this endangered population. The overall patterns support two major invasions into the desert through an ancient system of riparian corridors along streams and lake margins during the latter part of the Pleistocene followed by local in situ divergence subsequent to late Pleistocene and Holocene drying events. Changes in current water resource use could easily remove California voles from parts of the desert landscape.     

Prospective analysis of the invasive potential of the European grapevine moth Lobesia botrana (Den. & Schiff.) in California

• 1 The polyphagous European grapevine moth Lobesia botrana (Den. & Schiff.) is the principal native pest of grape berries in the Palearctic region. It was found in Napa County, California, in 2009, and it has subsequently been recorded in an additional nine counties, despite an ongoing eradication programme. The present study aimed to assess prospectively its potential geographical distribution and relative abundance in California and the continental U.S.A. A subsidiary goal was to provide explanation for timing control measures.
• 2 Data from the European literature were used to formulate and parameterize a holistic physiologically‐based demographic model for L. botrana. This model was linked to an extant mechanistic model of grapevine phenology, growth and development that provides the bottom‐up effects of fruiting phenology, age and abundance on L. botrana dynamics. Fruit age affects larval developmental rates, and has carryover effects on pupal development and adult fecundity. Also included in the model were the effects of temperature on developmental, survival and fecundity rates.
• 3 Observed daily weather data were used to simulate the potential distribution of the moth in California, and the continental U.S.A. The relative total number of pupae per vine per year was used as the metric of favourability at all locations. The simulation data were mapped using grass gis ( http://grass.osgeo.org/ ).
• 4 The model predicts L. botrana can spread statewide with the highest populations expected in the hotter regions of southern California and the lower half of the Central Valley. In the U.S.A., areas of highest favourability include south Texas, and much of the southeast U.S.A.
• 5 The effects of a warmer climate on pest abundance were explored by increasing observed mean temperatures 2° and 3 °C. L. botrana abundance is expected to increase in northern California and in the agriculturally rich Central Valley but to decrease in the hot deserts of southern California where summer temperatures would approach its upper thermal limit.
• 6 Analysis of the timing of mating disruption pheromone for control of L. botrana suggests the greatest benefit would accrue by targeting adults emerging from winter diapause pupae and the flight of first summer adults.

     

Classical biological control of Aphis gossypii (Homoptera: Aphididae) with Neozygites fresenii (Entomophthorales: Neozygitaceae) in California cotton

In August 1994 and 1995 classical biological control releases were made in cotton in the San Joaquin Valley, California, with an Arkansas strain of the entomopathogenic fungus, Neozygites fresenii, a pathogen of the cotton aphid, Aphis gossypii. Pre-release samples in both years indicated that N. fresenii was not naturally present in A. gossypii populations in the San Joaquin Valley. Two release methods were compared: dried N. fresenii-infected cotton aphid “cadavers” and chamber inoculation of A. gossypii. Both methods were successful in introducing N. fresenii to cotton aphids in California; however, higher prevalence of fungal infection resulted with the cadaver treatments. N. fresenii persisted and spread in the aphid population until early October 1994 and late September 1995. The highest mean percentage infection in the cadaver treatment in 1994 reached a level (14%) considered imminent for epizootics (12–15%). The use of predator exclusion cages resulted in higher N. fresenii prevalences.     

The pull of the Central Flyway? Veeries breeding in western Canada migrate using an ancestral eastern route

Understanding non‐breeding season movements and identifying wintering areas of different populations of migratory birds is important for establishing patterns of migratory connectivity over the annual cycle. We analyzed archival solar geolocation (N = 5) and global positioning data (N = 1) to investigate migration routes, stopover sites, and wintering areas of a western‐most breeding population of Veeries (Catharus fuscescens) in the Pemberton Valley, British Columbia, Canada. Geolocation data were analyzed using a Bayesian state‐space model to improve likely position estimates. We compared our results with those from a Veery population located ~250 km east across a mountain chain in the Okanagan Valley, British Columbia, and with an eastern population in Delaware, U.S.A. Migrating Veeries from the Pemberton Valley used an eastern trajectory through the Rocky Mountains to the Great Plains to join a central flyway during fall and spring migration, a route similar to that used by Veeries breeding in the Okanagan Valley. However, wintering destinations of Pemberton Valley birds were more varied, with inter‐individual wintering distances ~1000 km greater than birds from the Okanagan Valley population and ~500 km from the previously known winter range of Veeries. The observed eastern migration path likely follows an ancestral route that evolved following the most recent glacial retreat. Consistent with patterns observed from the Okanagan and Delaware populations, Veeries from the Pemberton Valley undertook an intra‐tropical migration on the wintering grounds, but this winter movement differed from those of previously studied populations. Such winter movements may thus be idiosyncratic or show coarse population associations. Intra‐wintering‐ground movements likely occur either in response to seasonal changes in habitat suitability or as a means of optimizing pre‐migratory fueling prior to long‐distance spring movements to North America.     

Release,establishment and realised geographic distribution of Diorhabda carinulata and D. elongata (Coleoptera: Chrysomelidae) in California,U.S.A.

This report summarises efforts to establish Diorhabda carinulata (Desbrochers) and D. elongata (Brullé) in California for the control of invasive saltcedars (Tamarix spp.), which degrade riparian ecosystems in the western United States. Over 14,000 D. carinulata individuals were released in California among four locations between 1999 and 2002 but beetles only established at the Tinemaha Reservoir site, the most eastern release location. More than 236,000 D. elongata individuals were released between 13 sites from 2003–2009 and establishment was limited to two sites, along the Cache and Pope creeks in northwestern California. The D. carinulata population did not disperse beyond the release area despite the presence of nearby (ca. 20?km) patches of the host plant. In contrast, D. elongata spread along Cache Creek and branches of related tributaries within the same watershed at ca. 14?km per year. A survey of 122 Tamarix stands across 15 California counties revealed that neither introduced beetle colonised other host patches, including those in neighbouring watersheds. Despite exclusive use of T. parviflora for ca. 36 generations, field collected D. elongata adults demonstrated strong preferences for T. ramosissima over T. parviflora when selecting both resting and ovipositional sites in caged choice tests. The proportion of D. elongata ovipositing on T. parviflora varied over time but with no clear trend of shifting host preference despite strong selection pressure. Explanations for the limited establishment and spread of Diorhabda spp. as well as impact to the target weeds are discussed.     

Climatic limits of pink bollworm in Arizona and California: effects of climate warming

The distribution and abundance of pink bollworm (Pectinophora gossypiella Saunders (PBW)) in cotton in Arizona and California was examined using a validated weather-driven, physiologically based demographic model of cotton and PBW integrated into a geographic information system (GIS). Survival of diapause larvae during winter as affected by low temperatures is a key factor determining the range of PBW. Winter survival was estimated using data from Gutierrez et al. (Can. Entomol. 109 (1977) 1457) and Venette et al. (Environ. Entomol. 29 (5) (2000) 1018). The model was run continuously over the period 1 January 1995 to 31 December 2003 using observed weather data from 121 locations. Three output variables were mapped as measures of PBW persistence: over-winter survival of diapause PBW larvae, cumulative daily PBW larval densities over the season, and the number of diapause larvae produced during the season. The distribution of pink bollworm is predicted to be restricted to the relatively frost-free cotton growing areas of Arizona and Southern California where it currently reaches pest status. The model predicts that extension of PBW's range into the Central Valley of California is unlikely. The analysis questions the efficacy of an ongoing area-wide effort to prevent the establishment of PBW in the Central Valley of California. Four global warming scenarios were examined to estimate the effects on the potential geographic range of PBW. Average observed daily temperatures were increased 1.0, 1.5, 2.0 or 2.5 °C, respectively, in the four scenarios. Scenarios with average increases of 1.5–2.5 °C predicted that the range of PBW would expand into the Central Valley of California and the severity of the pest would greatly increase in areas of current infestation.     

Invasion dynamics and potential spread of the invasive alien plant species Ageratina adenophora (Asteraceae) in China

Ageratina adenophora (Sprengel) R. King & H. Robinson (=Eupatorium adenophorum Sprengel) is one of the worst invasive alien species in China. Since A. adenophora was first noticed in Yunnan Province of China in the 1940s, its rapid spread has caused an ecological problem in south‐western China. Understanding its historical invasion pattern and its potential for further spread is needed to plan the management of the species. We reconstructed the historical process of its invasion and analysed its ecological preferences in the invaded region. After a lag phase of 20 years (1940–60), A. adenophora spread rapidly throughout the south and middle subtropical zones in Yunnan, Guizhou, Sichuan, and Guangxi, China, with an average expansion rate of 20 km per year. It spread relatively slowly in north subtropical areas, with an average expansion rate of 6.8 km per year. It has not established in warm temperate areas within the invaded regions. Although range expansion in Yunnan stopped after 1990, the expansion of its range into neighbouring provinces indicates that A. adenophora has not reached the full potential of its distribution and its range is still rapidly expanding within China. We applied ecological niche modelling (GARP — Genetic Algorithm for Rule‐set Prediction) to predict potential invasion areas in mainland China on the basis of occurrence points within colonized areas where A. adenophora has reached equilibrium. The predictions, confirmed by the range of values of four key environmental parameters, generally match the parameters of the geography and ecology in the invaded region. Southern and south‐central China have climatic conditions suggestive of a high potential for invasion by A. adenophora. Climatic conditions in northern and western China appear unsuitable for A. adenophora. Urgent measures should be taken to prevent this species from further spreading into the vast areas of potential habitat in southern and south‐central China.     

Population genetic structure of annual and perennial populations of Zostera marina L. along the Pacific coast of Baja California and the Gulf of California

The Baja California peninsula represents a biogeographical boundary contributing to regional differentiation among populations of marine animals. We investigated the genetic characteristics of perennial and annual populations of the marine angiosperm, Zostera marina, along the Pacific coast of Baja California and in the Gulf of California, respectively. Populations of Z. marina from five coastal lagoons along the Pacific coast and four sites in the Gulf of California were studied using nine microsatellite loci. Analyses of variance revealed significant interregional differentiation, but no subregional differentiation. Significant spatial differentiation, assessed using θ_ST values, was observed among all populations within the two regions. Z. marina populations along the Pacific coast are separated by more than 220 km and had the greatest θ_ST (0.13–0.28) values, suggesting restricted gene flow. In contrast, lower but still significant genetic differentiation was observed among populations within the Gulf of California (θ_ST = 0.04–0.18), even though populations are separated by more than 250 km. This suggests higher levels of gene flow among Gulf of California populations relative to Pacific coast populations. Direction of gene flow was predominantly southward among Pacific coast populations, whereas no dominant polarity in the Gulf of California populations was observed. The test for isolation by distance (IBD) showed a significant correlation between genetic and geographical distances in Gulf of California populations, but not in Pacific coast populations, perhaps because of shifts in currents during El Niño Southern Oscillation (ENSO) events along the Pacific coast.     

162 Interactions Between Planktonic Microalgae and Protozoan Grazers

Invasive algal species have the potential to change the structure and ecology of native algal communities. One well‐known invader, the large Japanese kelp Undaria pinnatifida, has recently become established at several locations along the central and southern California coast (Monterey, Santa Barbara, Catalina, and others). Previous to its introduction in the northeastern Pacific, Undaria has become established along the coastlines of several countries, including Australia, New Zealand, Argentina, England, and France. However, the seasonal population dynamics, rate of spread, and impact on local communities at each invasion site varies. Undaria in the Santa Barbara, CA harbor exhibits two distinct recruitment pulses per year (fall, late winter), with nonoverlapping generations of adult individuals. Individuals can grow rapidly and become reproductive a month after appearing as recruits (2–3 cm long), indicating a potential for rapid spread. However, Undaria may be effectively controlled by grazing via natural recruitment of the kelp crab Pugettia producta. However, Undaria invasions in other California invasions have not been controlled by herbivory, and Undaria populations in these areas have the potential to compete with a wide diversity of native California kelp species for habitat space and light.     

PHYLOGEOGRAPHY OF THE SPOTTED SAND BASS, PARALABRAX MACULATOFASCIATUS: DIVERGENCE OF GULF OF CALIFORNIA AND PACIFIC COAST POPULATIONS

Abstract Have the warm tropical waters and currents of the southern Gulf of California, Mexico (also known as the Sea of Cortez), formed a barrier to gene flow, resulting in disjunct populations in the upper gulf that are isolated from the outer Pacific Coast? Phylogeographic and genetic divergences of the spotted sand bass, Paralabrax maculatofasciatus, from three Gulf of California and two outer Pacific coastal locations were tested using mitochondrial DNA (mtDNA) control region sequences. Sequence data from two congeners that are sympatrically distributed along the outer Pacific Coast, the barred sand bass, P. nebulifer, and the kelp bass, P. clathratus, were used to gauge the levels of genetic divergences. Differences among the three species and between the northern gulf and outer Pacific coastal populations of P. maculatofasciatus also were analyzed using 40 allozymic presumptive gene loci. Allozyme and mtDNA analyses each revealed many fixed differences among the species. Three significant allozymic frequency differences and two fixed mtDNA substitutions differentiated the gulf and outer Pacific coastal populations of P. maculatofasciatus. Three unique mtDNA haplotypes and three unique allozyme alleles were identified from the outer Pacific coastal population. The gulf sites contained four unique mtDNA haplotypes and six unique allozyme alleles. Partitioning of the mtDNA variation revealed that 72% of the variance occurred between the gulf and outer Pacific Coast, 20% between sampling sites in the two regions, and 8% within the sites. There appears to be little gene flow across the waters of the southern Baja Penninsula, producing divergence estimated as 120,000 to 600,000 years between the outer Pacific coastal and the Gulf of California populations. This separation level may date to a hypothesized seaway closure near La Paz, Mexico, during the mid‐Pleistocene, and characterizes other fish populations. A second pattern of deeper allopatric species‐level divergences in some other fishes may date to a Pliocene closure of a mid‐Baja Penninsular seaway. Significant differences also were discerned in P. maculatofasciatus between the San Diego and central Baja California coastal sites and between the upper/central and the lower gulf locations. Variation between locations in the two regions may be indicative of larval retention and low adult migration, which needs to be tested further.     

Phylogeography of a stream-dwelling frog (Pseudacris cadaverina) in southern California

Recent phylogeographic studies of animal taxa in California have revealed common geographic patterns of evolutionary divergence and genetic diversity that are generally attributable to landscape influences. However, there remains a paucity of knowledge on the evolution of freshwater taxa in southern California. Here, we investigate phylogeographic patterns in a stream-dwelling frog (Pseudacris cadaverina). Two hundred and twenty-one individuals were collected from 46 populations across the species’ range in southern California. Using 1100 bp of sequence data from cytochrome b and tRNA-Glu, we conducted phylogenetic analyses, analysis of molecular variance, and nested clade phylogeographic analysis to gain insight into the factors contributing to the distribution of genetic diversity in P. cadaverina. We tested for evidence of two putative phylogeographic breaks and tested hypotheses that genetic diversity in this species is partitioned into (1) major watersheds, (2) mountain ranges, and (3) coastal and desert regions. Our results suggest that the eastern Transverse Ranges are the center of origin for extant P. cadaverina lineages and that the observed genetic structure in this species was established during the Pleistocene Epoch. There is strong support for three major haplotype groups and a Transverse Range break in P. cadaverina that is concordant with breaks found in numerous other taxa. The distribution of genetic diversity in P. cadaverina is due in large part to the separation of populations into different major watersheds and mountain ranges. Gene flow appears to be generally limited among disjunct populations throughout the region and some desert populations have been isolated by historical habitat fragmentation.     

Evaluating the genetic status of a Great Basin endemic minnow: the relict dace (<Emphasis Type="Italic">Relictus solitarius</Emphasis>)

The relict dace (Relictus solitarius) is an endemic minnow restricted to isolated spring systems within Butte, Goshute, Ruby and Steptoe valleys in the eastern Nevada portion of the Great Basin. It is the only native fish in these basins, but speckled dace (Rhinichthys osculus) have been introduced into some localities in Ruby Valley and, based on morphology, the two species are believed to have hybridized in those areas. We used DNA sequence data from one mitochondrial gene (cytochrome b) and one nuclear intron (S7) to determine if putative relict dace populations in Ruby Valley share mtDNA haplotypes with speckled dace, or show signs of hybridization. Results of our analyses show that 11 of 16 Ruby Valley populations sampled contain only speckled dace, and one speckled dace population exhibited signs of limited introgressive hybridization. The remaining five Ruby Valley populations that were sampled contain relict dace that remain genetically distinct from speckled dace. The integrity of the Ruby Valley relict dace populations should be actively protected, particularly in the area surrounding Ruby Lake where speckled dace have been widely introduced.     

Clan Lethals and Inter-Year Allelism in Death Valley DROSOPHILA PSEUDOOBSCURA

A chromosome 2 lethal allelism rate of about 3% was found in the 1974 population of D. pseudoobscura in Death Valley, California. This rate was significantly higher than allelism rates in other Southern California populations. The Death Valley population was sampled again in 1975 and 1977, with allelism rates of 1% and 0.5%, respectively. In 1974, several lethals were in high frequencies (about 1%), a pattern that reappeared in 1975 and 1977. However, none of the lethals in high frequency one year were in high frequency another year; the particular lethal alleles present in this ephemeral population appear to be due to their random presence in the flies which refound the population every winter. The results for the Death Valley population are compared with a Japanese population of D. melanogaster in which lethals in high frequency one year are also in high frequency in succeeding years and with earlier work on chromosome 3 of D. pseudoobscura, which showed a lower lethal frequency and higher allelism rate.