Pollen morphology and wood anatomy of the Crudia group (Leguminosae, Caesalpinioideae, Detarieae)

Pollen from all 12 and wood from 11 genera in the Crudia group have been examined using light, scanning electron and transmission electron microscopy. This group is currently of systematic interest because it is part of a tribe undergoing taxonomic revision. The pollen grains fall into four groups: (1) Oxystigma, Kingiodendmn, Gossweilerodendron, Bathiaea,.Neoapaloxylon, Stemonocoleus, Guibourlia and Prioria have pollen of a widespread and generalized cacsalpinioid type that are small to medium sized, spheroidal to prolate, tricolporate and with a perforate exine, with some variation in surface ornamentation, aperture margins and ultrastructure. (2) Crudia pollen is tricolporate, coarsely striate with a coarsely scabrate to vcrmiculate aperture membrane. (3) Augouardia is tricolporate and coarsely reticulate. (4) Hardwickia and Colophosperrnum are pantoporate and reticulate or microreticulate-rugulate. The wood of Prioria, Oxystigma, Kingiodendmn and Gossweilerodendron has diffusely arranged axial canals, and these are four genera that have recently been merged into Prioria. Bathiaea has tangentially arranged axial canals. The other genera lack normal axial canals. Crudia is distinct, with banded parenchyma and variably storied short rays, Augouardia has much less abundant axial parenchyma that is mainly scanty paratracheal and vasiccntric, Guibourtia has mainly aliform parenchyma and rays variable in height and width, and Colophosperrnum and Hardwickia have similar paratracheal parenchyma patterns, although the rays tend to be wider in the latter. Our conclusion is that the Crudia group is not monophyletic.     

Phylogeny of extant genera in the family Characeae (Charales,Charophyceae) based on rbcL,sequences and morphology

Extant genera of Characeae have been assigned to two tribes: Chareae (Chara, Lamprothamnium, Nitellopsis, and Lychnothamnus) and Nitelleae (Nitella and Tolypella), based on morphology of the thallus and reproductive structures. Character analysis of fossil and extant oogonia suggest that Tolypella is polyphyletic, the genus comprising two sections, one in each of the two tribes. Eleven morphological characters and sequence data for the Rubisco large subunit (rbcL) were used to reconstruct the phylogeny of genera, including the two sections of Tolypella. Parsimony analysis of the rbcL data, with all positions and changes weighted equally, strongly supports the monophyly of the Characeae. The two Tolypella sections form a robust monophyletic group basal to the family. Transversion weighting yielded the same tree but with a paraphyletic Tolypella. The rbcL data strongly support monophyly of tribe Chareae but tribe Nitelleae is paraphyletic. Parsimony analysis of morphological data produced one unrooted tree consistent with monophyly of the two tribes; on this tree the Tolypella sections were paraphyletic. Combining morphological with rbcL data did not change the results derived from rbcL sequences alone. The rbcL data support the monophyly of the Characeae and Coleochaete, which together form a monophyletic sister group to embryophytes.     

A new <Emphasis Type="Italic">Heteropterys</Emphasis> (Malpighiaceae) from semideciduous forest,with notes on wood anatomy

This paper describes and illustrates Heteropterys serrata, a new species endemic to semideciduous forests associated with inselbergs in the state of Espírito Santo, Brazil. Morphological and wood anatomical traits of the new species are compared to those of other species of the Heteropterys Metallophyllis informal group. Based on wood anatomy, H. serrata and H. nitida (the most morphologically similar species) have different axial parenchyma, which is scarce paratracheal in H. nitida (and some other species of the Metallophyllis informal group) and aliform confluent in H. serrata. The most notable morphological and anatomical characters that distinguish the new species are the young hexagonal stems, the unusual widely serrate leaf margins and the aliform confluent axial parenchyma in the wood.     

Phylogenetics of Quiinaceae (Malpighiales): evidence from trnL-trnF sequence data and morphology

We present the first parsimony analyses of the Neotropical family Quiinaceae using nucleotide sequence data from the non-coding trnL intron and trnL-trnF intergenic spacer of the plastid genome, analysed separately as well as in combination with morphology. Both molecules and combined data recover Quiinaceae as a well-supported monophyletic group. Quiinaceae form a polytomy together with their potential sister groups, the monophyletic Ochnaceae s.str. and the monotypic Medusagynaceae from the Seychelles in the Indian Ocean. Froesia is resolved as sister to the rest of the family. Other members of the family, Lacunaria, Quiina, and Touroulia, are all recovered as monophyletic despite the inclusion of strikingly distinctive representatives (L. oppositifolia and Q. pteridophylla). Relationships among the last three genera, however, are yet uncertain. Optimising characters of breeding system onto the molecular phylogeny reveals that bisexual flowers (Froesia) are the ancestral state in Quiinaceae, whereas androdioecy (Quiina, Touroulia) and dioecy (Lacunaria) are derived breeding systems.     

On a new subsection of Pandanus section Cauliflora (Pandanaceae) with paniculate staminate inflorescence structure,distinctive leaf anatomy and pollen morphology

A new subsection, Pandanus section Cauliflora subsection Paniculiflora, is described to contain P. halleorum, on the grounds of the paniculate structure of its staminate inflorescence, a feature not known elsewhere within the genus Pandanus. Both leaf anatomy and pollen morphology appear to support this taxonomic separation.     

Phylogenetic position of Dunaliella acidophila (Chlorophyceae) based on ITS and rbcL sequences

Dunaliella acidophila is one of the most extreme acidophiles on earth and is able to survive in highly acidic habitats. This characteristic has made this organism the universal model for the study of abiotic stress. Although D. acidophila is currently circumscribed to the subgenus Pascheria within Dunaliella Teodoresco (Chlorophyceae), its taxonomic position has stirred controversy. The comparison of D. acidophila CCAP19/35 internal transcribed spacers (including ITS2 secondary structure analysis) and RuBisCo large subunit (rbcL) sequences with other Dunaliella species confirms that D. acidophila should maintain its phylogenetic position within the genus Dunaliella, suggesting its inclusion within the subgenus Dunaliella. Furthermore, the ITS1 and ITS2 data revealed that D. acidophila was highly divergent from the other freshwater species assessed, D. lateralis, with which it barely shares a 56.8% similarity.     

Systematic revision of the genus Reinboldiella (Ceramiaceae,Rhodophyta) from Taiwan based on comparative morphology and rbcL sequence analyses,including two new species of Reinboldiella

The genus Reinboldiella essentially consists of tiny, membranous blades, epiphytic on benthic red algae, with a wide distribution in the north-western Pacific Ocean (Taiwan, Korea and Japan). In this study, we re-examined the generitype R. schmitziana from Taiwan and neighbouring islands. Two new species of Reinboldiella, R. orientalis sp. nov. and R. taiwanensis sp. nov. are recognized from Taiwan based on comparative morphological studies and molecular analyses of RuBisCO large subunit (rbcL) gene sequences. Reinboldiella orientalis is characterized by its rosette-like appearance, with both erect and prostrate, membranous flat blades whereas R. taiwanensis is distinguishable by mainly consisting of erect, membranous blades with few, short prostrate blades in basal parts of the thalli. Thalli of R. schmitziana also have a rosette-like appearance, but their erect flat blades have cylindrical bases or stipes. The rbcL phylogenetic analyses also support the separation of R.‘schmitziana’ from Taiwan and R. schmitziana from Japan and Korea.     

Systematic implications of pollen morphology in Elsholtzia (Elsholtzieae–Lamiaceae)

Pollen morphology of 18 species (32 specimens) representing all three currently recognized sections of the genus Elsholtzia (Elsholtzieae–Lamiaceae) was investigated in detail using light, scanning electron and transmission electron microscopy. Elsholtzia pollen grains are small to medium in size (P=20–50 μm, E=16–45 μm), mostly prolate‐spheroidal to prolate, and rarely oblate‐spheroidal to subprolate in shape (P/E=0.95–1.46), hexacolpate (the amb more or less circular or ellipsoid) with granular aperture membranes. Three distinct types of sexine ornamentation are observed in Elsholtzia: perforate, rugulose‐bireticulate, and bireticulate. The bireticulate pattern is the most common, showing a wide range of morphological variation among species. The exine thickness varies from 1.2 to 2.5 μm. Among the present palynological data, the variability observed in sexine ornamentation of Elsholtzia could be of systematic significance. Current infrageneric classification of the genus Elsholtzia is partially congruent with pollen morphological data.     

Phylogenetic analyses of Malpighiales using plastid and nuclear DNA sequences, with particular reference to the embryology of Euphorbiaceae sens. str.

We present phylogenetic analyses of Malpighiales, which are poorly understood with respect to relationships within the order, using sequences from rbcL, atpB, matK and 18SrDNA from 103 genera in 23 families. From several independent and variously combined analyses, a four-gene analysis using all sequence data provided the best resolution, resulting in the single most parsimonious tree. In the Malpighiales [bootstrap support (BS) 100%], more than eight major clades comprising a family or group of families successively diverged, but no clade containing more than six families received over 50% BS. Instead, ten terminal clades that supported close relationships between and among families (>50% BS) were obtained, between, for example, Balanopaceae and Chrysobalanaceae; Lacistemataceae and Salicaceae; and Phyllanthaceae and Picrodendraceae. The monophyly of Euphorbiaceae sens. str. were strongly supported (BS 100%), but its sister group was unclear. Euphorbiaceae sens. str. comprised two basally diverging clades (BS 100%): one leading to the Clutia group (Chaetocarpus, Clutia, Pera and Trigonopleura), and the other leading to the rest of the family. The latter shared a palisadal, instead of a tracheoidal exotegmen as a morphological synapomorphy. While both Acalyphoideae (excluding Dicoelia and the Clutia group) and Euphorbioideae are monophyletic, Crotonoideae were paraphyletic, requiring more comprehensive analyses.     

Molecular phylogenetic analysis of Passifloraceae sensu lato (Malpighiales) based on plastid and nuclear DNA sequences

A phylogenetic analysis of Passifloraceae sensu lato was performed using rbcL, atpB, matK, and 18S rDNA sequences from 25 genera and 42 species. Parsimony analyses of combined data sets resulted in a single most parsimonious tree, which was very similar to the 50% majority consensus tree from the Bayesian analysis. All nodes except three were supported by more than 50% bootstrap. The monophyly of Passifloraceae s.l. as well as the former families, Malesherbiaceae, Passifloraceae sensu stricto, and Turneraceae were strongly supported. Passifloraceae s.s. and the Turneraceae are sisters, and form a strongly supported clade. Within Passifloraceae s.s., the tribes Passifloreae and Paropsieae are both monophyletic. The intergeneric relationships within Passifloraceae s.s. and Turneraceae are roughly correlated with previous classification systems. The morphological character of an androgynophore/gynophore is better used for characterizing genera grouping within Passifloraceae s.s. Other morphological characters such as the corona and aril are discussed.     

Comparative pollen morphology of Glechoma and Marmoritis(Nepetinae,Lamiaceae)

The pollen morphology of 13 taxa(34 specimens)of the genera Glechoma L.,and Marmoritis Benth.was investigated in detail using light,scanning electron,and transmission electron microscopy.Pollen grains of all studied taxa are small to large in size(P = 32.5-60.4μm,E = 20.2-50.5μm),prolate-spheroidal to prolate in shape and mostly hexacolpate(the amb more or less circular or rarely ellipsoid)with granular membranes.The sexine ornamentation of Glechoma is bireticulate; the muri of the primary reticulum are irregularly circled,and lumen size is short.In contrast,the sexine surfaces of the Marmoritis pollen tend to more elongate or wider at the muri of the primary reticulum than those of the Glechoma.The pollen wall stratification of selected taxa(three from Glechoma and one from Marmoritis)is characterized by unbranched columellae,and continuous or distinctly discontinuous endexine based on transmission electron microscopy observation.The results of Glechoma and Marmoritis reveal rather similar pollen morphological features,however,fine details of sexine ornamentation are characteristic to differentiate the pollen taxa.Although these differences may be useful in establishing the taxonomic boundary between two genera,they are too weak to segregate diagnostic characters.     

Phylogeny of cetrarioid lichens (Parmeliaceae) inferred from ITS and b-tubulin sequences,morphology, anatomy and secondary chemistry

Phylogenetic relationships within the family Parmeliaceae (lichenized ascomycetes) with emphasis on the heterogeneous group of cetrarioid lichens are reconstructed. The results are based on cladistic analyses of DNA-sequences, morphological and chemical data. Almost all currently recognized cetrarioid genera were included in the analyses together with parmelioid and alectorioid members of the presumably monophyletic family Parmeliaceae. We tried to sample taxonomic diversity of the family as widely as possible. The ITS1-5.8S-ITS2 region of the rDNA and a partial β-tubulin gene from 126 samples representing 82 species were analysed. Cetrarioid lichens were identified as a monophyletic group, supported by both ITS and β-tubulin characters. This group was reanalysed using 47 morphological, anatomical and secondary chemistry characters combined with the DNA data matrix. ITS and β-tubulin sequences provide congruent information, and a clear correlation between DNA-data and conidial shape is observed. The current taxonomy of the cetrarioid lichens is discussed and compared with the phylogenetic trees obtained here. A comprehensive study of the phylogeography of some bipolar or subcosmopolitic species with representatives from both hemispheres was performed. Cetraria aculeata is the only taxon where correlation between DNA-data and geographic origin is observed.     

Seedling morphology in Genisteae (Fabaceae) &om south-west Spain

The morphology of the seedlings of 30 taxa belonging to the tribe Genisteae (Fabaceae) from the Iberian Peninsula has been studied to determine morphological features of taxonomic value in this developmental phase. These characters do not segregate taxa but can be used to separate them into groups. Subtribes Genistinae and Lupininae can be distinguished by median seedling size and the shape and size of the cotyledons. In the same way, the number of leaflets, the presence or absence of foliar stipules, and the existence of foliaceous or fleshy cotyledons, provide characters to describe six seedling types for the tribe Genisteae— Gaistu, Atgyrolobium, Cytisus, Retama, Adenocarpus and Lupinus —each including several taxa. It is also concluded that, at the generic level, only Retama, Lupinus and to some extent Adenocarpus can be distinguished from their seedling characteristics; the other genera have a set of morphological features that do not allow such a segregation.     

线蕨属（水龙骨科）的系统发育研究：来自叶绿体rbcL和rps4-trnS序列的证据

线蕨属Colysis 植物主要分布于亚洲热带和亚热带地区,少数种类分布至非洲、澳大利亚(昆士兰)及新几内亚地区.自1849年成立以来,线蕨属的分类范畴和系统位置一直有待确定.本文利用叶绿体基因组的rbcL、rps4基因和rps4-trnS基凶间隔区序列,运用最大简约法和贝叶斯方法分析了线蕨属及其近缘类群的系统演化关系.研究结果显示:(1)线蕨属和薄唇蕨属Leptochilus(含似薄唇蕨属Paraleptochilus)组成一个支持率很高的单系分支(C-L Clade),但是薄唇蕨属的成员位于线蕨属的不同支系内,支持线蕨属和薄唇蕨属合并为一个属;(2)瘤蕨属Phymatosorus单独形成一个单系分支;(3)星蕨属Microsorum是一个多系类群,除Microsorium linguiforme、M.varians和M.pustulatum与马来群岛的Lecanopteris聚在一起外,其他的星蕨属成员均位于不同的支系上.本文的系统发育分析结果为线蕨属和薄唇蕨属的分类处理提供了分子系统学的证据.