Autopodial skeleton evolution in side-necked turtles (Pleurodira)

Carpal and tarsal anatomy was documented based on the observation of dry skeletons of adult specimens representing 25 species in 15 genera and on data taken from the literature. In addition, histological sections and cleared and double‐stained autopodia of recently hatched and juvenile specimens representing seven chelid and pelomedusoid species were studied. There is much more morphological diversity in the manus than in the pes. Variation in autopodial skeletons includes: the astragalus and calcaneum are either separated or fused; fusion of distal carpals 3–4−5 or just 4–5; number of centralia in the carpus; and presence/absence of a pisiform and of an accessory radial element. The widespread and probably basal phalangeal formula for Pleurodira is 2.3.3.3.3. Deviations are Pelomedusa subrufa, exhibiting a reduction to 2.2.2.2.2, Pelusios spp. with one phalanx less in digit I and for one species in digit V as well, and Acanthochelys pallidipectoris with an additional phalanx in the fourth finger. Six discrete characters itemizing some of the morphological variation observed were plotted on a composite pleurodire phylogeny, revealing not only homoplastic patterns but also the utility of some characters in supporting the monophyly of several clades. The pisiform is the last carpal element to ossify in Chelus fimbriatus. We hypothesize that the so‐called fifth hooked metatarsal represents the fusion of distal tarsal 5 with metatarsal V. The accessory radial element that was occasionally present in the turtles examined may represent an atavism of the otherwise lost radiale of turtles.     

Testing phylogenetic implications of eggshell characters in side-necked turtles (Testudines: Pleurodira)

Amniote egg and eggshell morphology is a rich source of characters to link aspects of reproductive biology with systematics. Extensive work concerning both anatomy and phylogenetic assignability has been done on fossil bird and dinosaur eggs, but little is known for extant sauropsids. The utility of eggshell characters for phylogenetic analyses is tested and discussed for extant side-necked turtles (Pleurodira), and the diversity of egg ultrastructure is examined in several species. Egg gross morphology and eggshell ultrastructure of 12 species of extant side-necked turtles was documented using scanning electron microscopy. Thirteen eggshell characters were scored and mapped on a composite phylogeny and ancestral character states were reconstructed. Many of the characters do not show a phylogenetic signal according to a test comparing the number of steps on the chosen phylogeny with that on randomly generated trees. The presence of conservative, clade-supporting features could be demonstrated, and the following clades are supported by several characters: the Elseya-Emydura entity, short-necked Australasian chelids, is backed by two characters, and two additional characters could potentially support this group. Three characters support the monophyly of South American chelids, whereas two characters argue for the exclusion of Hydromedusa, a long-necked form resembling Australian chelids rather than South American forms, from this clade.     

Development of microsatellite markers in the Australasian snake-necked turtle Chelodina rugusa and cross-species amplification

Seventeen microsatellite loci were developed for the snake-necked turtle, Chelodina rugosa (Ogilby, 1890). Sixteen of the loci were polymorphic but three of these loci had null alleles. One locus displayed linkage disequilibrium. These 17 markers were tested for amplification in eight congeneric species with varying success; 98% amplification in Chelodina burrungandjii, 72% in C. canni, 38% in C. expansa, 58% in C. longicollis, 67% in C. mccordi, 73% in C. oblonga, 81% in C. parkeri, and 68% in C. pritchardi. These microsatellite markers will be useful for population assignment, gene flow, mating systems and hybridization studies in the genus Chelodina.     

Morphology and function of the feeding apparatus of Pelusios castaneus (Chelonia; Pleurodira)

Feeding mechanics of vertebrates depend on physical constraints of the surrounding media, water or air. Such functions are inseparably combined with form. The aim of this study is to show this linkage for the pleurodiran freshwater turtle Pelusios castaneus and, additionally, to point out the major functional and biomechanical distinctions between aquatic and terrestrial feeding turtles as well as several intermediate forms. Gross morphological investigations of skull, hyoid, tongue, and connected musculature, as well as scanning electron microscopy of the tongue surface, show typical features of an aquatic feeder, e.g., strongly developed hyoid apparatus vs. a small tongue with only moderate papillae, and massive jaw and hyoid musculature. Additionally, the special function of the esophagus during feeding is investigated to elucidate the problems of a bidirectional feeder. The esophagus is highly distensible in order to store the excess water sucked in during feeding until the prey is fixed by the jaws. The distension is probably achieved by a coincidence of active (branchial horn) as well as passive (water) components. P. castaneus is a feeding generalist, and is well adapted to the aquatic medium in terms of its functional as well as morphological features.     

A new species of the genus Spiroxys (Nematoda; Spiruroidea) from Australian chelonians of the genus Chelodina (Chelidae)

Summary Spiroxys chelodinae n. sp. is described from Australia in three species of freshwater chelonian, Chelodina longicollis, C. expansa and C. oblonga and from New Guinea in an unidentified freshwater chelonian. S. chelodinae differs from other species of the genus in having pseudolabia each with a blunt, prominent, cuticular projection (tooth) on the middle lobe and no other cuticular prominences, a cuticular collar without spines or protrusions, and a gubernaculum with tubes through which the spicules pass. Larvae (probably fourth-stage larvae of S. chelodinae) are also described. This is the first record of a Spiroxys sp. from the Australian Region, and from a host group (suborder Pleurodira), which has a Gondwana distribution. This is discussed in relation to the zoogeography of the genus Spiroxys and it is postulated that Australian chelids acquired this parasite from non-marine cryptodires (possibly carettochelyids or trionychids). In addition, a Spiroxys sp. is recorded from Nigeria, constituting the first such record from the Ethiopian Region. It was found in Pelusius subniger, thus constituting the second record of a Spiroxys species in a pleurodire.     

A phylogeny for side-necked turtles (Chelonia: Pleurodira) based on mitochondrial and nuclear gene sequence variation

Aspects of the phylogeny of pleurodiran turtles are contentious, particularly within the Chelidae. Morphological analyses group the long-necked Australasian Chelodina and the long-necked South American Chelus and Hydromedusa into a single clade, suggesting a common derived origin of the long neck and associated habits that predated the separation of Australia from South America. In contrast, published analyses of 12SrRNA and cytochrome b sequences suggest that the long-necked Chelodina are more closely related to the short-necked Australasian genera than to either Chelus or Hydromedusa. This paper adds partial sequences of 16S rRNA and CO1 mitochondrial genes and partial sequences of the nuclear oncogene c-mos to test a range of previous hypotheses on the phylogenetic relationships among chelid turtles. In total, 1382 nucleotides were available for each of 25 taxa after elimination of ambiguously aligned regions. These taxa included representatives of all the genera of the turtle families Chelidae and Pelomedusidae, the three sub-genera of Phrynops, and recognized sub-generic groups of Elseya and Chelodina. Of the four genes examined, 12S rRNA was the most informative, followed by c-mos with 16S rRNA and CO1 the least informative. The molecular data support the currently accepted arrangement for pelomedusid genera, that is, a sister relationship between the African Pelusios and Pelomedusa and a clade comprising the South American Peltoceplhalus and Podocnemis with the Madagascan Erymnochelys. However, there is also support for Erymnochelys and Podocnemis as sister taxa to the exclusion of Peltocephalus (bootstrap values of 69–80%) which is at odds with the most commonly accepted arrangement. The South American chelids are monophyletic (76–82%). This clade includes the long-necked Chelus and Hydromedusa, but excludes the Australasian long-necked Chelodina. Furthermore, the South American long-necked chelids are not themselves monophyletic, with 98–100% bootstrap values for the node supporting Chelus and the remaining South American chelids to the exclusion of Hydromedusa. Hence, the hypothesis of a monophyletic grouping of the long-necked genera of South America and Australasia is not supported by the molecular data. Although reciprocal monophyly of the South American and Australasian chelid faunas was the most likely and the most parsimonious arrangement in all but one analysis, bootstrap support for the monophyly of the Australasian chelids was low (52–66%). The South American chelids, Chelodina and the short-necked Australasian chelids form an unresolved trichotomy. The genera Phrynops and Elseya are paraphyletic, leading to a recommendation to elevate the three sub-genera of Phrynops to generic status and support for previous suggestions to erect a new genus for Elseya latistermum and close relatives. A revised classification of the extant Pleurodira is presented, consistent with the phylogenetic relationships that emerge from this study.     

Functional morphology of the feeding mechanism in aquatic ambystomatid salamanders

This study addresses four questions in vertebrate functional morphology through a study of aquatic prey capture in ambystomatid salamanders: (1) How does the feeding mechanism of aquatic salamanders function as a biomechanical system? (2) How similar are the biomechanics of suction feeding in aquatic salamanders and ray-finned fishes? (3) What quantitative relationship does information extracted from electromyograms of striated muscles bear to kinematic patterns and animal performance? and (4) What are the major structural and functional patterns in the evolution of the lower vertebrate skull? During prey capture, larval ambystomatid salamanders display a kinematic pattern similar to that of other lower vertebrates, with peak gape occurring prior to both peak hyoid depression and peak cranial elevation. The depressor mandibulae, rectus cervicis, epaxialis, hypaxialis, and branchiohyoideus muscles are all active for 40–60 msec during the strike and overlap considerably in activity. The two divisions of the adductor mandibulae are active in a continuous burst for 110–130 msec, and the intermandibularis posterior and coracomandibularis are active in a double burst pattern. The antagonistic depressor mandibulae and adductor mandibulae internus become active within 0.2 msec of each other, but the two muscles show very different spike and amplitude patterns during their respective activity periods. Coefficients of variation for kinematic and most electromyographic recordings reach a minimum within a 10 msec time period, just after the mouth starts to open. Pressure within the buccal cavity during the strike reaches a minimum of ?25 mmHg, and minimum pressure occurs synchronously with maximum gill bar adduction. The gill bars (bearing gill rakers that interlock with rakers of adjacent arches) clearly function as a resistance within the oral cavity and restrict posterior water influx during mouth opening, creating a unidirectional flow during feeding. Durations of electromyographic activity alone are poor predictors of kinematic patterns. Analyses of spike amplitude explain an additional fraction of the variance in jaw kinematics, whereas the product of spike number and amplitude is the best statistical predictor of kinematic response variables. Larval ambystomatid salamanders retain the two primitive biomechanical systems for opening and closing the mouth present in nontetrapod vertebrates: elevation of the head by the epaxialis and depression of the mandible by the hyoid apparatus.     

Derived appendicular morphology in Early Cretaceous aquatic turtles evidenced by the track record

A well‐preserved isolated manus impression evidences the presence of derived aquatic adaptations in the forelimb morphology of Berriasian turtles. Size and the abundant co‐occurring turtle fauna indicate that the track was left by a large‐sized, bottom‐walking basal pancryptodiran. The footprint shows an interesting mosaic of primitive and derived features. The basic turtle pattern is reflected by a short and broad autopodium but thin phalanges, claw reduction and extensive webbing enclosing the digits and lateral and medial margins of the distal metapodium are clearly specialized features related to the aquatic environment. Some characters including the proportional elongation of the first digit, which reached as far distally as the other digits and was probably highly mobile at the metacarpal‐phalangeal joint, indicate an even higher degree of specialization. The specimen gives evidence on a hitherto unknown range of appendicular modification in Early Cretaceous turtles, and redundantly proves the aquatic habitat and locomotion of large‐sized turtles from the Berriasian of northwestern Germany.     

Aptorchis megacetabulus n. sp. (Platyhelminthes: Digenea) from the northern long-necked turtle, Chelodina rugosa (Pleurodira: Chelidae), in Australia

Aptorchis megacetabulus n. sp. is described from the intestine of the northern long-necked turtle, Chelodina rugosa (Pleurodira: Chelidae), in Northern Territory, Australia. This is the first helminth species reported from C. rugosa. This plagiorchioidean digenean differs from the 3 previously known species of Aptorchis in the relative size of the ventral sucker, overall body proportions, nature of the cirrus sac, and egg size. Comparison of approximately 2,700 bases of ribosomal DNA obtained from all known Aptorchis species strongly supports the status of Aptorchis megacetabulus n. sp. as a new species.     

Nine microsatellite markers for the Australian side-necked turtle Chelodina expansa (Chelidae) and cross species amplifications

Nine microsatellite DNA loci for the Australian broad-shelled freshwater turtle (Chelodina expansa) are presented. Markers were tailed with 20-mer oligonucleotides for use in four-colour fluorescent multiplex PCRs. The markers show high allelic richness (mean N_A = 10.9, range 2–38) and expected heretozygosity (mean H_E = 0.643; range 0.161–0.963) indicating that they will be valuable for population genetics studies in C. expansa. Cross-species amplification in three Australian freshwater turtle species further highlights the potential utility of these markers, particularly in the side-neck species C. longicollis and C. rugosa.     

The complete mitochondrial genome sequences of <Emphasis Type="Italic">Chelodina rugosa</Emphasis> and <Emphasis Type="Italic">Chelus fimbriata</Emphasis> (Pleurodira: Chelidae): implications of a common absence of initiation sites (O<Subscript>L</Subscript>) in pleurodiran turtles

Within the order Testudines, while phylogenetic analyses have been performed on the suborder Cryptodira with complete mitochondrial genomes (mitogenomes), mitogenomic information from another important suborder Pleurodira has been inadequate. In the present study, complete mitochondrial DNA (mtDNA) sequences of two chelid turtles Chelodina rugosa and Chelus fimbriata were firstly determined, the lengths of which were 16,582 and 16,661 bp respectively. As the typical vertebrate mitogenome, both mtDNAs consist of 13 protein coding genes, 2 ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and a long noncoding region (control region, CR). However, the initiation sites for light-strand replication (O_L), which has been identified in all reported Cryptodire mitogenomes, were not found in the putative position of the two chelid turtles and African helmeted turtle Pelomedusa subrufa. The results suggested that the absence of mitogenomic initiation sites (O_L) could be a characteristic of Pleurodira. Phylogenetic relationships of chelid turtles and other turtles were reconstructed using the reported mitogenomes. Both maximum likelihood (ML) and Bayesian inference (BI) analyses suggested the monophyly of Pleurodira and Cryptodira as well as a sister group relationship between the two chelid turtles with strong statistical support. This phylogenetic framework was also utilized to estimate divergence dates among lineages using relaxed-clock methods combined with fossil evidence. Divergence estimates revealed that genus Chelodina diverged from genus Chelus in Late Cretaceous (~83 million years ago (mya)), and the time is consistent with the vicariance of the fragments which was caused by Gondwana split.     

Aerial and aquatic oxygen uptake by freely-diving snapping turtles (Chelydra serpentina)

Summary Aerial oxygen consumption of unrestrained, freely-diving warm-and cold-acclimated snapping turtles, Chelydra serpentina, was measured at 10, 20, and 30°C. Also, simultaneous determinations of aerial and aquatic oxygen uptake by voluntarilydiving animals were made at 4 and 20°C. The standard rates of aerial oxygen consumption are equivalent in cold-and warm-acclimated animals in water and in cold-acclimated ones in air; these rates are all lower than those of warm-acclimated animals in air. Thus either cold acclimation or voluntary submergence reduces the standard metabolic rate of snapping turtles but the effects are not additive. Aquatic oxygen uptake during voluntary submergence is more important at low than at moderate temperatures and probably contributes significantly to gas exchange in these animals as they overwinter beneath the ice of ponds and streams.     

Influence of sexual selection and feeding functional morphology on diversification rate of parrotfishes (Scaridae)

Scaridae (parrotfishes) is a prominent clade of 96 species that shape coral reef communities worldwide through their actions as grazing herbivores. Phylogenetically nested within Labridae, the profound ecological impact and high species richness of parrotfishes suggest that their diversification and ecological success may be linked. Here, we ask whether parrotfish evolution is characterized by a significant burst of lineage diversification and whether parrotfish diversity is shaped more strongly by sexual selection or modifications of the feeding mechanism. We first examined scarid diversification within the greater context of labrid diversity. We used a supermatrix approach for 252 species to propose the most extensive phylogenetic hypothesis of Labridae to date, and time-calibrated the phylogeny with fossil and biogeographical data. Using divergence date estimates, we find that several parrotfish clades exhibit the highest diversification rates among all labrid lineages. Furthermore, we pinpoint a rate shift at the shared ancestor of Scarus and Chlorurus, a scarid subclade characterized by territorial behaviour and strong sexual dichromatism, suggesting that sexual selection was a major factor in parrotfish diversification. Modifications of the pharyngeal and oral jaws that happened earlier in parrotfish evolution may have contributed to this diversity by establishing parrotfishes as uniquely capable reef herbivores.     

Demographic response of snake-necked turtles correlates with indigenous harvest and feral pig predation in tropical northern Australia

Species that mature late, experience high levels of survival and have long generation times are more vulnerable to chronic increases in mortality than species with higher fecundity and more rapid turnover of generations. Many chelonians have low hatchling survival, slow growth, delayed sexual maturity and high subadult and adult survival. This constrains their ability to respond quickly to increases in adult mortality from harvesting or habitat alteration. In contrast, the northern snake-necked turtle Chelodina rugosa (Ogilby 1890) is fast-growing, early maturing and highly fecund relative to other turtles, and may be resilient to increased mortality. Here we provide correlative evidence spanning six study sites and three field seasons, indicating that C. rugosa is able to compensate demographically to conditions of relatively low subadult and adult survival, caused by pig Sus scrofa (Linnaeus 1758) predation and customary harvesting by humans. Recruitment and age specific fecundity tended to be greater in sites with low adult and subadult survival (and thus reduced densities of large turtles), owing to higher juvenile survival, a smaller size at onset of maturity and faster post-maturity growth. These patterns are consistent with compensatory density-dependent responses, and as such challenge the generality that high subadult and adult survival is crucial for achieving long-term population stability in long-lived vertebrates such as chelonians. We posit that long-lived species with 'fast' recruitment and a capacity for a compensatory demographic response, similar to C. rugosa, may be able to persist in the face of occasional or sustained adult harvest without inevitably threatening population viability.     

The functional morphology of the feeding appendages and gut of Hippolyte varians (Crustacea: Natantia)

The musculature of the feeding appendages are described and compared with those few early accounts of other Decapoda, particularly those of Pandalus danae and Astacus fluviatilis . While the musculature is very similar to that of the latter, the relative importance of the various muscles may differ markedly and a number of previously undescribed muscles have been found, while others present in Pandulus and Astacus are not present in Hippolyte . The alimentary canal is also described, together with its associated musculature. The function of the various appendages and the parts of the gut are described from observations of living specimens.     

Diving behaviour, aquatic respiration and blood respiratory properties: a comparison of hatchling and juvenile Australian turtles

Australia has a number of bimodally respiring freshwater turtle species that use aquatic respiration to extend their aerobic dive limit. While species variations in reliance on aquatic respiration are reflected in the diving behaviour and ecology of adults, it is unknown whether these relationships also occur in hatchling and juvenile turtles. This study compared the diving behaviour, aquatic respiration and blood respiratory properties of hatchling and juveniles from five species of Australian freshwater turtles: Rheodytes leukops , Elusor macrurus , Elseya albagula , Elseya latisternum and Emydura signata . Both diving behaviour and physiology differed significantly between species as well as age classes. Dive duration in R. leukops was 17 times longer than the other species, with two hatchlings remaining submerged for the entire 72 h recording period. The long dive duration recorded for R. leukops was supported by a high reliance on aquatic respiration (63–73%) and high blood oxygen affinity ( P ₅₀=17.24 mmHg). A correlation between dive duration, aquatic respiration and blood respiratory properties was not observed in the remaining turtle species where, despite the longer dive duration of Els. albagula and Elu. macrurus compared with Em. signata and Els. latisternum , there was no difference observed in per cent aquatic respiration or blood oxygen affinity between these species. When compared with adult individuals (data from previous studies), dive duration was positively correlated with body size in Em. signata , Els. albagula and R. leukops , but a negative relationship occurred in Els. latisternum and Elu. macrurus .     

Chondrocranium and skeletal development of Phrynops hilarii (Pleurodira: Chelidae)

The present study represents the first comprehensive contribution to the knowledge of the skeletal development of a pleurodiran turtle, Phrynops hilarii (Pleurodira, Chelidae). The most remarkable features found are: (1) absence of ascending process on pterygoquadrate cartilage; (2) presence of ossification centres for the epiotics; (3) as in other pleurodirans, dorsal ribs IX and X are ‘sacralized’; (4) contact between ilium and carapace occurs later in ontogenetic development; (5) suture between ischia, pubes and plastron occurs in posthatching specimens; (6) contrary to previous interpretations, the phalangeal formula of the pes of P. hilarii is 2 : 3 : 3 : 3 : 5; (7) the hooked bone represents the fifth metatarsal.     

Linking functional morphology and feeding performance in larvae of two coral-reef fishes

Despite the well acknowledged phenomenon that the biology of marine teleost fish larvae is much different from that of juvenile and adult conspecifics, very little is known about the changes in design of the feeding apparatus as larvae develop from hatching through metamorphosis. Furthermore, our understanding of the consequences of these developmental changes for feeding performance is very limited. In this study, we examined the relationship between the development of the feeding apparatus and feeding performance in larvae of Amphiprion ocellaris and Pseudochromis fridmani using cluster analysis, multi-dimensional scaling (nMDS), and canonical correspondence analysis (CCA). Several patterns emerge from our analyses. First, the state of development of the feeding apparatus increased in complexity through ontogeny, from a simple, hyoid-driven system at the onset of exogenous feeding to a more complex feeding system involving all adult functional elements of the cranium just prior to metamorphosis. Although the feeding apparatus converged to the hyoid-opercular-mandible linkage state around metamorphosis in both species, P. fridmani had a lesser developed hyoid-mandible linkage system relative to A. ocellaris at the onset of first-feeding. Second, first-feeding larvae fed on smaller, less elusive zooplankton. In contrast, larvae that survived beyond the first-feeding stage fed on more diverse prey types, including larger, more elusive zooplankton. Third, intra- and inter-specific variation in the development of the feeding apparatus is associated with variation in feeding performance. The post-hatch developmental trajectory in both species showed a pattern consistent with stage (i.e., ontogenetic state)-specific shifts in morphology and performance. Furthermore, the number of developmental transitions in both feeding functional morphology and feeding performance differ between species that exhibit contrasting incubation periods.     

The functional morphology of feeding in three species of maldanid polychaetes

The functional morphology of deposit feeding relative to proboscideal morphology of the maldanid polychaetes Axiothella rubrocincta (Johnson, 1901), Clymenella californica Blake & Kudenov, 1974, and Praxillella affinis pacifica (Berkeley, 1929) from central California is presented. The proboscides of these species are externally and internally similar. They consist of a cuticulatized buccal mass, a bucco-pharyngeal junction and ciliated pharynx. A functional unit of the feeding process is the palpode because its secretions enable the proboscis to be effectively everted. These worms exploit die physical properties of the substratum by changing its dilatancy (and thixotropy) while feeding. The rapidly emerging buccal mass increases the dilatancy of the sediment and provides a penetration anchor. The buccal mass partially deflates and loosens the substratum just prior to the forceful extrusion of the bucco-pharyngeal junction. Sediment about the latter region becomes dilatant. The proboscis then shortens and widens, causing the substratum about the pharynx to become thixotropic while it becomes dilatant about the region of the proboscis proximal to the pharynx. The worms push their proboscides into the loosened sediment while pharyngeal ciliary currents and the undulating bucco-pharyngeal margin draw food into the pharynx. Pharyngeal cilia and the buccal mass function in particle selection.
The maldanids and arenicolids examined to date share similar and basic proboscideal morphologies and activities. It is suggested that the feeding mechanism described for the maldanids, A. rubrocincta, C. californica and P. affinis pacifica , will be found in some members of both families.