Sclerotinia sclerotiorum: when "to be or not to be" a pathogen?

Sclerotinia sclerotiorum is unusual among necrotrophic pathogens in its requirement for senescent tissues to establish an infection and to complete the life cycle. A model for the infection process has emerged whereby the pathogenic phase is bounded by saprophytic phases; the distinction being that the dead tissues in the latter are generated by the actions of the pathogen. Initial colonization of dead tissue provides nutrients for pathogen establishment and resources to infect healthy plant tissue. The early pathogenicity stage involves production of oxalic acid and the expression of cell wall degrading enzymes, such as specific isoforms of polygalacturonase (SSPG1) and protease (ASPS), at the expanding edge of the lesion. Such activities release small molecules (oligo-galacturonides and peptides) that serve to induce the expression of a second wave of degradative enzymes that collectively bring about the total dissolution of the plant tissue. Oxalic acid and other metabolites and enzymes suppress host defences during the pathogenic phase, while other components initiate host cell death responses leading to the formation of necrotic tissue. The pathogenic phase is followed by a second saprophytic phase, the transition to which is effected by declining cAMP levels as glucose becomes available and further hydrolytic enzyme synthesis is repressed. Low cAMP levels and an acidic environment generated by the secretion of oxalic acid promote sclerotial development and completion of the life cycle. This review brings together histological, biochemical and molecular information gathered over the past several decades to develop this tri-phasic model for infection. In several instances, studies with Botrytis species are drawn upon for supplemental and supportive evidence for this model. In this process, we attempt to outline how the interplay between glucose levels, cAMP and ambient pH serves to coordinate the transition between these phases and dictate the biochemical and developmental events that define them.     

Attraction of a predator to chemical information related to nonprey: when can it be adaptive?

Information specificity can be important to animals in makingoptimal decisions. However, it is not always necessary to useevery level of specificity. We analyzed the response of thepredatory mite Phytoseiulus persimilis to plant-produced informationrelated to a nonprey herbivore. This predator is a specialistfeeding on spider mites in the genus Tetranychus. Caterpillarsof Spodoptera exigua cannot serve as prey. Plants respond toan infestation by herbivores with the emission of volatilesthat attract carnivorous enemies of the herbivores. Conspecific plants infested with different herbivore species can emit blendsthat are qualitatively identical, while differing in the ratiosof blend components. However, different plant species emitvolatile blends that differ qualitatively. We demonstratedthat the predator P. persimilis is attracted to volatiles frombean plants infested with S. exigua caterpillars, but thatthis attraction is affected by predator starvation and host-plantexperience. One-hour and 24-h starved predators were made to represent predators that just lost a prey patch versus predatorsthat have totally lost a prey patch. Predators reared on spidermites on bean were attracted to bean plants infested with caterpillarswhen starved for 1 h but not when starved for 24 h. Both predatorgroups were attracted to bean plants infested with prey (i.e.,spider mites). One-hour starved predators can use the odorto relocate the rewarding prey patch they just lost contactwith, and using a general olfactory representation of the blendis sufficient for relocation. In contrast, for 24-h starvedpredators, the perception of a plant's odor blend is unlikelyto represent the prey patch lost, and discriminating betweenan odor blend representing prey or nonprey will avoid investingtime in finding a nonprey herbivore. In contrast, predatorsthat had been reared on spider mites on cucumber and thus hadexperienced a qualitatively different odor blend were not attractedto volatiles from caterpillar-infested bean plants. They wereattracted to spider mite-infested bean plants, irrespectiveof starvation level. To cucumber-experienced predators, theperception of bean plant odor cannot represent the prey patch lost, but only a new prey patch. Being discriminative and onlyresponding to prey-infested plants is adaptive in this situation.Our results are discussed in the context of optimal informationprocessing.     

Red leaves, insects and coevolution: a red herring?

W.D. (Bill) Hamilton proposed that coevolution between plants and herbivorous insects explains the bright autumnal colouration of leaves. Accordingly, plants invest in bright signals to reduce their herbivore load, whereas insects use these bright signals to identify less-defended hosts more efficiently. Archetti and Brown have recently revisited this theory by explaining its basic predictions and providing new research perspectives. Their work presents an important basis to our understanding of non-green leaf colouration, provided that alternative adaptive explanations on the photoprotective and antioxidant role of leaf pigments, or their possible function in crypsis to herbivores are incorporated into future research.     

Machine learning and genome annotation: a match meant to be?

By its very nature, genomics produces large, high-dimensional datasets that are well suited to analysis by machine learning approaches. Here, we explain some key aspects of machine learning that make it useful for genome annotation, with illustrative examples from ENCODE.     

Triphalangeal thumb and psychomotor retardation: a new association?

The triphalangeal thumb (TPT) is a rare malformation in which the thumb is presented as a long digit of three phalanges. We describe two brothers showing TPT and psychomotor retardation, especially in language. Difficulties in language development were also observed in children with TPT in another study. The coexistence of TPT and psychomotor retardation in those patients and in the two patients described here suggests that TPT and psychomotor retardation could be part of a syndromic association not described previously.     

Estimating home-range size: when to include a third dimension?

Most studies dealing with home ranges consider the study areas as if they were totally flat, working only in two dimensions, when in reality they are irregular surfaces displayed in three dimensions. By disregarding the third dimension (i.e., topography), the size of home ranges underestimates the surface actually occupied by the animal, potentially leading to misinterpretations of the animals' ecological needs. We explored the influence of considering the third dimension in the estimation of home‐range size by modeling the variation between the planimetric and topographic estimates at several spatial scales. Our results revealed that planimetric approaches underestimate home‐range size estimations, which range from nearly zero up to 22%. The difference between planimetric and topographic estimates of home‐ranges sizes produced highly robust models using the average slope as the sole independent factor. Moreover, our models suggest that planimetric estimates in areas with an average slope of 16.3° (±0.4) or more will incur in errors ≥5%. Alternatively, the altitudinal range can be used as an indicator of the need to include topography in home‐range estimates. Our results confirmed that home‐range estimates could be significantly biased when topography is disregarded. We suggest that study areas where home‐range studies will be performed should firstly be scoped for its altitudinal range, which can serve as an indicator for the need for posterior use of average slope values to model the surface area used and/or available for the studied animals.     

Sanctions and mutualism stability: when should less beneficial mutualists be tolerated?

Why do mutualists perform costly behaviours that benefit individuals of a different species? One of the factors that may stabilize mutualistic interactions is when individuals preferentially reward more mutualistic (beneficial) behaviour and/or punish less mutualistic (more parasitic) behaviour. We develop a model that shows how such sanctions provide a fitness benefit to the individuals that carry them out. Although this approach could be applied to a number of symbioses, we focus on how it could be applied to the legume‐rhizobia interaction. Specifically, we demonstrate how plants can be selected to supply preferentially more resources to (or be less likely to senesce) nodules that are fixing more N₂ (termed plant sanctions). We have previously argued that appreciable levels of N₂ fixation by rhizobia are only likely to be selected for in response to plant sanctions. Therefore, by showing that plant sanctions can also be favoured by natural selection, we are able to provide an explanation for the stability of the plant‐legume mutualism.     

Can there be an escalating arms race without coevolution? Implications from a host-parasitoid simulation

Summary Under a restricted set of conditions, predator-prey or parasite-host systems may exhibit an escalating arms race over several generations that is not coevolutionary. Preconditions for such a process include high correlation between prey/host quality and defensive capability, and phenotypic plasticity in predator/parasite-counter defenses that responds to quality. We present simulation models based on the parasitoid waspEurytoma gigantea, which lays its egg in the goldenrod gall induced by the flyEurosta solidaginis. For the parasitoid to successfully lay an egg, the gall walls must be thinner than the parasitoid's ovipositor is long. Wall thickness is highly correlated with gall size, so probability of successful attack declines with gall size. However, since the parasitoid eats the gall tissue, individuals developing in small galls have little food and mature with shorter ovipositors than those which develop in large galls. The simulation showed that the population mean parasitoid size is set by mean gall size. Since small galls are more frequently parasitized, there is a selection pressure on the gallmaker to induce larger galls. But, an additional simulation showed that since parasitoid ovipositor length depends on gall size, an evolutionary increase in gall size will also result in a non-evolutionary increase in parasitoid body size and ovipositor length over several generations.     

Could diffuse coevolution explain the generic eggshell color of the brown-headed cowbird?

The brown-headed cowbird (hereafter cowbird) is an avian brood parasite that produces an egg dissimilar to those produced by the majority of its diverse host community. The cowbird’s generic egg may result from a Jack-of-all-trades strategy; however, the evolutionary mechanisms that select for their generic eggs are unclear. Here we propose that the cowbird’s eggshell phenotypes have evolved via diffuse coevolution, which results from community-level selective pressures, rather than via pairwise coevolution that occurs between a particular host species and its brood parasite. Under diffuse coevolution the cowbird’s host community, with varying eggshell phenotypes and recognition abilities, would select for a cowbird eggshell phenotype intermediate to those of its host community. This selection is exerted by hosts that reject cowbird eggs, rather than those that accept them; therefore, we expect cowbird eggshell colors can be approximated by both the phenotypes and rejection abilities of their host community. Here we use eggshell reflectance data from 43 host species to demonstrate that the cowbird eggshell phenotypes are reasonably predicted (within 2 just noticeable differences) by the eggshell phenotypes and rejection rates of their hosts. These findings suggest that cowbird eggshell phenotypes, and potentially those of other some generalist parasites, may evolve via diffuse coevolution. Importantly, this research provides insight into the underlying evolutionary processes that explain observed phenotypic variation and provides a framework for studying selection on both specialist and generalist parasites’ traits.     

Plasmodium falciparum transmission rate and selection for drug resistance: a vexed association or a key to successful control?

While malaria eradication campaigns once adopted a combination of vector control and chemotherapy to overcome the disease, today's opinion on the matter is equivocal. So what has changed? This paper reviews some of the confusing hypotheses on the relationship between Plasmodium falciparum transmission and levels of drug resistance. New field evidence showing variations of in vivo chloroquine resistance in relation to indoor residual spraying and natural endemicity patterns, is considered with a view to how these phenomena implicate on control.     

Centrioles: bad to be bald?

In the alga Chlamydomonas, mutation of the gene encoding the novel centriolar component Bld10p results in seemingly acentriolar cells. Remarkably, bld10 cells are viable, highlighting the question of whether or not centrioles are essential.     

Integrin adhesion: when is a kinase a kinase?

Recent genetic studies in the worm Caenorhabditis elegans and fruitfly Drosophila have revealed the essential role integrin-linked kinase plays in integrin adhesion - but it apparently acts in this role as an adaptor rather than a kinase.     

Can edible grasshoppers and silkworm pupae be tasted by humans when prevented to see and smell these insects?

Out of 26 students (11 male, 15 female) that were blindfolded and held their noses, 14 correctly identified the taste of insects when given pieces of cheese, dried fish, beondaegi (commercially available Korean Bombyx mori silkworm pupae), inago (commercially available Japanese Oxya yezoensis grasshoppers) and white bread to taste. Eight identified one of the food insects and four failed to detect any. Of 11 students given a choice between beondaegi, inago and hachinoko (larval wasps of Vespula flaviceps) most students preferred the inago grasshoppers, three ranked the commercially available hachinoko first and one gave the top position to the beondaegi silkworm pupae. It is concluded that insects, per se, are not terribly easy to identify by taste alone. Given the well documented aversion of especially people of western cultural backgrounds to insects in food, our results suggest that insects processed into flour or pastes have a greater chance to be accepted by the consumer (as they cannot easily be identified by taste alone) than food that displays insect images on its packing.

Cabbage (Brassica oleracea var. Capitata) fails to show wound-induced defence against a specialist and a generalist herbivore?

This paper presents tests of a model of wound-induced defence in herbaceous plants. Many studies have reported both chemical changes in leaves and changes in the behaviour and/or physiology of herbivores as a result of wounding leaves. These studies and others have led to the development of various models to explain wound-induced effects both in terms of plant response and herbivore behaviour. The model under test was proposed by Edwards and Wratten (1987) and predicts that wounding a plant will cause herbivores (1) to take more meals of a smaller size and/or consume less foliage overall (2) grow more slowly and (3) be more mobile. These predictions were tested in cabbage Brassica oleracea L. var. Capitata cv. Pixie with Pieris brassicae L. (Lepidoptera: Pieridae) as a herbivore specialising on cabbage, and Spodoptera littoralis Boisd. (Lepidoptera: Noctuidae) as a generalist herbivore. Both insects showed some reduction in consumption of leaves from upper parts of the plant, but no change in meal size. There were no effects on the growth or mobility of either species as a result of wounding foliage. These results are discussed in relation to the predictions of the model.