一株高锰氧化活性大肠杆菌的分离鉴定和多铜氧化酶基因的克隆与结构特性

锰氧化物是Mn(Ⅱ)经生物和化学氧化后形成的矿物成分,在元素生物地球化学循环过程中起着重要作用,而不同种类的细菌对Mn(Ⅱ)的氧化作用是自然界中氧化锰矿物形成的主要成因.从山东崅峪采集的铁锰结核棕壤中分离得到一株具有高锰氧化活性的土壤杆菌,其对Mn(Ⅱ)的氧化作用活性明显高于其它分离菌株,达到65 μmol/L.通过个...     

Mn(Ⅱ)氧化细菌Pseudomonas aeruginosa L3的分离、鉴定及氧化特性

【背景】Mn(Ⅱ)氧化细菌是一类可以沉积和氧化Mn(Ⅱ)从而形成固态锰氧化物的细菌,在生物地球化学和环境修复领域中引起了广泛关注,但目前所研究的Mn(Ⅱ)氧化模式菌株中大多来源海洋,土壤源Mn(Ⅱ)氧化细菌涉及较少。【目的】丰富土壤源Mn(Ⅱ)氧化细菌的来源与物种多样性,同时也为方铁锰矿型Mn₂O₃的潜在应用提供新菌种。【方法】从湖南省株洲市已关停的清水塘冶炼工业园区内筛选得到一株具有Mn(Ⅱ)氧化能力的铜绿假单胞菌(Pseudomonas aeruginosa) L3,并就其分离纯化、鉴定、生长曲线、pH变化、Mn(Ⅱ)氧化特性及锰氧化物制备等方面进行系统研究。【结果】Pseudomonas aeruginosa L3的菌液离心后的上清液及提取的绿脓菌素(pyocyanin, PYO)均具有Mn(Ⅱ)氧化能力,与菌液相比,上清液对Mn(Ⅱ)氧化的能力更强。进一步利用X射线衍射(X-ray diffraction, XRD)对Pseudomonas aeruginosa L3产生的锰氧化物进行晶相分析,发现该锰氧化物在2θ为32.951°和5...     

锰氧化菌Bacillus sp. MK3-1的Mn(Ⅱ)氧化特性和除锰能力研究

锰氧化微生物能够将可溶的Mn(II)氧化为不溶的锰氧化物沉淀, 因此在生物除锰研究上具有重要的应用价值。本研究从锰污染土壤中分离到一株锰氧化菌Bacillus sp. MK3-1, 该菌对MnCl2有较高抗性, 其最低抑制浓度(Minimal inhibitory concentration, MIC)为20 mmol/L。实验表明该菌在培养基中Mn(Ⅱ)的去除率高达96%, 同时将其制成固体包埋菌剂应用于含0.15 mmol/L的MnCl2水溶液实验, 结果表明其仍然具有稳定的除锰能力, 去除率为87.12%, 使溶液的终锰浓度符合国家排放标准。扫描电子显微镜观察和能谱分析实验表明, 实验产生的锰氧化物均匀地分布在Bacillus sp. MK3-1的细胞表面, 细胞表面含锰量为19.60% (W/W)。用简并引物扩增目前被认为催化锰氧化的多铜氧化酶基因mnxG, 获得了903 bp的基因片段, 其基因产物与已报道的多铜氧化酶具有86%的同源性。     

一株台湾红酵母(Rhodotorula taiwanensis)的鉴定及其除Mn(Ⅱ)性能研究

【目的】探究一株红酵母对Mn(Ⅱ)的去除效率及其作用机制。【方法】从酸性矿山废水中分离出一株耐酸酵母菌,通过形态和26S rRNA基因测序对菌种进行鉴定,研究不同pH和Mn(Ⅱ)浓度对该菌除Mn(Ⅱ)效果的影响。采用扫描电镜、X射线衍射分析和X射线光电子能谱仪进行产物表征。【结果】分离得到的酵母菌经鉴定为台湾红酵母(Rhodotorula taiwanensis),其在pH 2.0、2 000 mg/L Mn(Ⅱ)条件下仍能生长较好。在初始pH 6.0、Mn(Ⅱ) 300 mg/L条件下培养144 h后,对Mn(Ⅱ)的去除率能达到98.52%;然而较高浓度的Mn(Ⅱ) (≥500 mg/L)会对细胞产生毒性,从而降低去除效果。R. taiwanensis MF4在去除Mn(Ⅱ)的过程中可以将Mn(Ⅱ)氧化成锰氧化物(主要为无定型的MnO₂、Mn₂O₃、MnO),形成层状物质在细胞表面积累,而且能产生碱度,提升环境pH值,最高可达8.4 [初始pH 7.0,Mn(II) 100 mg/L,144 h]。【结论】R. taiwanensis MF4具有耐受低pH和高浓度Mn(II)、有效去除Mn(II)以及产碱的作用,研究结果对酸性矿山废水修复与治理的末端工艺设计具有参考价值。     

一株锰氧化细菌的分离、鉴定及其锰氧化特性

【目的】获得锰氧化细菌,对锰矿周边土壤中生物所参与的锰氧化过程进行初探。【方法】依据细菌是否能氧化Mn(Ⅱ),形成棕褐色锰氧化物进行筛选。利用染料LBB对生成的锰氧化物进行检测。通过考察分离菌株的形态、生理特征和16S r RNA基因、gyr B基因、gyr A基因序列的同源性对分离菌株进行鉴定。分析筛选菌与所在属已知锰氧化菌的亲缘关系。利用LBB显色法检测氧化锰的动态生成,通过扫描电镜-能谱分析和X射线衍射技术分析生物氧化锰的表征。【结果】获得1株锰氧化细菌菌株,命名为CP133,综合形态、生理及分子分析结果,鉴定为蜡样芽孢杆菌(Bacillus cereus),分离菌株与多株分离自海洋及土壤的芽孢类锰氧化菌在进化上具有一定的差异。与其他菌株比较菌株CP133具有较强的锰氧化能力,进入稳定期后可生成紧密结合在菌体周围的无定形态生物氧化锰。【结论】从锰矿周边土壤分离出1株具有较强锰氧化功能的蜡样芽孢杆菌,丰富了土壤芽孢类锰氧化菌的资源,同时也为锰矿周围土壤与锰氧化菌间的生物地球化学循环提供了线索及材料。     

解淀粉芽胞杆菌BaX030的分离鉴定及抗菌功能

摘要:【目的】芽胞杆菌是微生物活性物的重要来源,从全国各地采集的72份土壤样品中分离出339株芽胞杆菌,研究各菌株抑菌活性,分离纯化抑菌活性物,为丰富芽胞杆菌菌种资源和微生物次级代谢物的挖掘奠定实际应用基础。【方法】采用水浴加热和稀释平板涂布等方法从河南花生地采集的土壤中筛选得到一株具有很强抑菌活性的芽胞杆菌,结合形态观察、生理生化特征和16S rRNA基因序列同源性比对分析,对该菌株进行鉴定。丙酮沉淀、葡聚糖凝胶柱层析、C18反相柱层析得到Bacillus amyloliquefaciens X030抑菌活性物,LC-MS/MS鉴定其分子量。利用滤纸片扩散法和平板对峙培养法测定抑菌谱及拮抗性质。【结果】筛选分离得到一株解淀粉芽胞杆菌,归类并命名为解淀粉芽胞杆菌Bacillus amyloliquefaciens X030。BaX030对金黄色葡萄球菌(Staphylococcus aureus)、白色念珠菌(Candida albicans)、酵母菌( Saccharomycetes)有较强抑制效果,对水稻稻瘟病菌(Pyriculariaoryzae)、辣椒尖胞炭疽病菌(Chili pointed cell anthrax)、枇杷炭疽病菌(Gloeosporium eriobotryae speg)、烟草黑胫病菌(Phytophthora parasitica)有良好拮抗活性。初步确定BaX030产生的抑菌活性物为多肽类化合物。【结论】分离得到的B． amyloliquefaciens X030产生了一个对病原细菌具有较强抑制作用的多肽,同时该菌株在拮抗植物病原真菌方面也有明显的效果。     

青海可可西里嗜碱芽胞杆菌资源调查

【目的】了解可可西里嗜碱芽胞杆菌资源多样性及产酶多样性,为芽胞杆菌功能资源挖掘和菌剂开发提供基础。【方法】采用Horikoshi I培养基,通过可培养法分离青海可可西里土壤中的嗜碱芽胞杆菌,利用16S r RNA基因序列初步鉴定分离获得的芽胞杆菌。采用透明圈法分析分离菌株的产蛋白酶、纤维素酶及木聚糖酶活性。【结果】从青海可可西里土壤中共分离获得66株嗜碱芽胞杆菌,根据16S r RNA基因序列相似性分析,发现它们隶属于6个属22个种,分别为芽胞杆菌属(Bacillus)、纤细芽胞杆菌属(Gracilibacillus)、喜盐芽胞杆菌属(Halobacillus)、咸海鲜芽胞杆菌属(Jeotgalibacillus)、类芽胞杆菌属(Paenibacillus)和嗜冷芽胞杆菌属(Psychrobacillus),其中以芽胞杆菌属(Bacillus)为优势属。2株嗜碱芽胞杆菌与它们最近匹配模式菌株的16S r RNA基因序列相似性为97.00%和98.65%,为潜在新种。三种酶活检测结果表明产酶菌株约占总分离菌株的95.00%,其中55株具有产蛋白酶活性,27株具有产纤维素酶活性,8株能够产木聚糖酶。【结论】青海可可西里蕴藏着较丰富的嗜碱芽胞杆菌资源及丰富的产酶资源,为后续嗜碱芽胞杆菌的挖掘提供理论基础。     

一株乙二醇氧化酶菌株的筛选及催化特性的初步研究

利用富集培养技术从土壤中筛选获得1株高活性二醇氧化活性菌株Brevibacterium sp.CCZU12-1。以Brevibacterium sp.CCZU12-1静息细胞为催化剂,最适催化反应温度、反应pH和金属离子添加量分别为30℃、6.5和Mn2＋0.1 mmol/L。在最佳条件下,转化200 mmol/L乙二醇24 h,羟基乙酸的产率为94.6%,分批补料乙二醇5批,羟基乙酸的累积浓度为972 mmol/L。     

基于可培养法分析亚热带植物内生与根际芽胞杆菌种类分布异质性

【背景】芽胞杆菌是农业上重要的微生物菌剂,对植物具有促生、防病、防虫等作用。【目的】了解亚热带植物内生和根际芽胞杆菌的种群分布,为其功能挖掘提供科学依据。【方法】采用可培养手段对甘蔗(Saccharum officinarum)、红麻(Hibiscus cannabinus L.)、黄麻(Corchorus capsularis L.)、黄秋葵(Abelmoschus esculentus)和玫瑰茄(Hibiscus sabdariffa)根际土壤和根内生芽胞杆菌进行分离,利用16S rRNA基因测序对分离菌株进行分类鉴定,并分析系统发育地位。【结果】共获得了可培养芽胞杆菌菌株144株,其中根内生芽胞杆菌82株,根际土壤62株。经16S rRNA基因测序鉴定为芽胞杆菌4个属37个种,分别为芽胞杆菌属、短芽胞杆菌属、类芽胞杆菌属和赖氨酸芽胞杆菌属。芽胞杆菌菌落数量和种类在根部及其根际土壤中差异较大,根际土壤中芽胞杆菌菌落数量远远大于根部,根际土壤中芽胞杆菌菌落含量范围为(0.2-370.0)×10~5CFU/g,而根部为(0.1-81.0)×10~3 CFU/g。根部分离获得的芽胞杆菌种类远大于根际土壤中,从作物根际土壤中共获得了芽胞杆菌19个种,从根部获得内生芽胞杆菌共32个种。阿氏芽胞杆菌(Bacillus aryabhattai)、仙草芽胞杆菌(Bacillus mesonae)和假蕈状芽胞杆菌(Bacillus pseudomycoides)同时存在于4种作物的根际土壤和根部,其他芽胞杆菌种类仅存在于1种作物的根际或者根部。【结论】亚热带作物根际土壤和根部芽胞杆菌种类和数量极为丰富,而且还存在可分离培养的芽胞杆菌潜在新物种,这为了解植物与根际微生物相互作用、根际环境生态平衡提供了理论基础和科学依据。     

东北地区耐盐芽胞杆菌筛选统计及初步鉴定

采用温度筛选与表面定向培养相结合的方法对东北地区土壤中可培养耐盐芽胞杆菌进行分离和筛选,得到137株芽胞杆菌,其中耐盐芽胞杆菌74株,占总芽胞杆菌数量的54%,最适盐浓度均为1%,耐盐能力在4%-14%之间。通过扩增耐盐菌株的16S rRNA基因序列,对其进行分子鉴定和分类,获得东北地区土壤中可培养的耐盐芽胞杆菌的多样性信息。通过同源性比对和耐盐性差异,确定36株差异耐盐芽胞杆菌,分属于芽胞杆菌属中的7个种。其中多数菌株为苏云金芽胞杆菌(Bacillus thuringiensis)(14株,占总数38.9%,最高耐盐性在4%-9%NaCl之间)。其次依次为蜡样芽胞杆菌(Bacillus cereus)(7株,19.4%,4%-8%NaCl),枯草芽胞杆菌(Bacillus subtilis)(7株,19.4%,8%-11%NaCl),炭疽芽胞杆菌(Bacillus anthracis)(4株,11.1%,5%-7%NaCl),弯曲芽胞杆菌(Bacillus flexus)(2株,5.6%,9%-14%NaCl),球形芽胞杆菌(Bacillus sphaericus)(1株,2.8%,5%NaCl)和阿氏芽胞杆菌(Bacillus aryabhattai)(1株,2.8%,6%NaCl)。弯曲芽胞杆菌和枯草芽胞杆菌的耐盐能力较好。从中选取3株代表菌株,明确了其培养特性、形态特征及生理生化特性,并对其分别进行了系统发育分析。     

Development and effectiveness of a soluble manganese silicate compound in controlling manganese deficiency in plants

Summary A study was made of soluble manganese silicates prepared by adding a solution of manganese sulfate to different concentrations of sodium silicate in alkaline medium. The solubility of manganese increased with increasing amounts of sodium silicate and reached its maximum at a molar Na₂SiO₃/MnSO₄ ratio between 10 and 15. At molar Na₂SiO₃/MnSO₄ ratios of 5 and more a red-brown coloured manganese silicate is formed, which is stable in the pH range of 4 to 12. Gel chromatographic analysis indicated that this compound contains 1 molecule Mn per 15 molecules SiO₂. At a molar Na₂SiO₃/MnSO₄ ratio of 15 the yield of soluble manganese could be raised to 98.5% of the theoretical amount by preventing the rapid oxidation of the Mn²⁺-ions in the alkaline solution. A pot experiment with oats was conducted to evaluate the effectiveness of the red-brown manganese silicate in controlling manganese deficiency. The effect of the Mn-carrier on Mn-content and yield of grain and on the colour scores was compared with that of Mn-EDTA, Mn-DTPA and MnSO₄·4H₂O. The manganese silicate was found to be a more effective manganese source than Mn-EDTA, Mn-DTPA or MnSO₄·4H₂O.     

Manganese(II) adsorption and oxidation by whole cells and a membrane fraction of Pedomicrobium sp. ACM 3067

Heat treatment of Pedomicrobium sp. ACM 3067 enhanced the adsorption of Mn(II) to whole cells but abolished Mn(II)-oxidising activity. In whole cells, optimal Mn(II)-oxidising activity occurred at pH 7 and 25 °C. The apparent K _m of the Mn(II)-oxidising system for Mn(II) was 26 μM. These data confirm that Mn(II) oxidation is an enzymic process in Pedomicrobium sp. ACM 3067. Measurement of Mn(II) oxidation during the growth cycle demonstrated that the highest activity occurred during early- to mid-exponential phase and was independent of the presence of Mn in the growth medium. Mn(II)-oxidising activity was localised to the membrane fraction. Transmission electron microscopy showed that this fraction consisted of double-layered membrane vesicles. Positively charged molecules such as poly-l-lysine interfered with the adsorption and oxidation of Mn(II) by whole cells and membranes. Similarly, aminoglycoside antibiotics such as gentamicin sulfate proved to be potent inhibitors of Mn(II) oxidation. Treatment of cells with the copper chelator diethyldithiocarbamate inhibited Mn(II) oxidation. Enzyme activity was restored by the addition of Cu(II) ions, but not by Co(II) nor Zn(II). We conclude that Mn(II) oxidation in Pedomicrobium sp. ACM 3067 is catalysed by a Cu-dependent enzyme. Received: 14 September 1998 / Accepted: 4 January 1999     

Manganese as an ecological factor in salt marshes

The plant available manganese concentration (Mn²⁺) of salt-marsh sediments was compared to that of acidic and neutral soils. The mean soil-manganese concentration was higher in the top 1 cm of salt-marsh soil than in the neutral soil and comparable to that of the acidic soil (0–5 cm). A peak in the soil-manganese concentration in the upper marsh was observed one week after the spring tide but this effect was not evident in the lower marsh. Despite these differences, there was no correlation between mean manganese concentration and position on the marsh.The response to manganese of salt-marsh halophytes was studied by measuring growth and root elongation in a range of Mn²⁺ concentrations with and without sodium chloride. Although there was a differential response to manganese between salt-marsh species, manganese resistance was not related to position on the marsh. Most of the species investigated were tolerant of Mn²⁺ at concentrations higher than normally recommended for plant growth. Moreover a salt-marsh ecotype of Festuca rubra was found to have a higher manganese resistance than an inland ecotype of the same species.When sodium chloride was included in the growth medium, salt-marsh plants had a greatly increased resistance to manganese associated with a reduced uptake. This effect is reflected in the tissue-manganese concentration which was lower than in Deschampsia flexuosa although both groups of plants were exposed to a similar range of Mn²⁺ concentrations. It is concluded that sodium chloride markedly reduces the phytotoxicity of manganese in salt marshes.Nomenclature following Clapham, Tutin & Warburg (1968). Flora of the British Isles.The work was carried out while one of us (C. E. Singer) was in receipt of an SERC studentship, which is gratefully acknowledged.     

High-performance liquid chromatography with spectrophotometric and electrochemical detection of a series of manganese(III) cationic porphyrins

Recent studies have revealed potent pharmacological activities of manganese-containing cationic porphyrins. An analytical method employing high-performance liquid chromatography with spectrophotometric and electrochemical detection (HPLC-UV/EC) suitable for in vivo applications is described for a series of manganese(III) cationic porphyrins with good separation and resolution. In particular, this method resolved the four atropisomers of manganese(III) meso-tetrakis(N-ethylpyridinium-2-yl)porphyrin (MnTE-2-PyP5+ or AEOL-10113), verified by mass spectrometry. Electrochemical and spectrophotometric methods of detection were compared using manganese(III) meso-tetrakis(1,3-diethylimidazolium-2-yl)porphyrin (MnTDE-2-ImP5+ or AEOL-10150), the lead catalytic antioxidant of this series. Both methods of detection were quantitative, but electrochemical detection, although less specific for in vivo applications, appears to be considerably more sensitive than spectrophotometric detection.     

Lignin peroxidase is involved in the biobleaching of manganese-less oxygen-delignified hardwood kraft pulp by white-rot fungi in the solid-fermentation system

Biobleaching of manganese-less oxygen-delignified hardwood kraft pulp (E-OKP) by the white-rot fungi Phanerochaete sordida YK-624 and P. chrysosporium was examined in the solid-state fermentation system. P. sordida YK-624 possessed a higher brightening activity than P. chrysosporium, increasing pulp brightness by 13.4 points after seven days of treatment. In these fermentation systems, lignin peroxidase (LiP) activity was detected as the principle ligninolytic enzyme, and manganese peroxidase and laccase activities were scarcely detected over the course of treatment of E-OKP by either fungus. Moreover, a linear relationship between brightness increase and cumulative LiP activity was observed under all tested culture conditions with P. sordida YK-624 and P. chrysosporium. These results indicated that LiP is involved in the brightening of E-OKP by both white-rot fungi.     

Formation of manganese oxyhydroxides on the Dead Sea coast by alteration of Mn-enriched carbonates

Manganese enriched carbonates preferentially accumulate in near-shore, shallow water sediments of the Dead Sea. These carbonates are formed by coprecipitation of Mn with authigenic aragonite, as well as by direct precipitation of Mn-carbonate from the pore water of the shallow sediments. The primary source of the Mn that accumulates as carbonates is allochthonous Mn-enriched oxides that are eroded from the nearby coasts and become buried within the near-shore shallow water sediments. Due to the decline in the level of the Dead Sea between 1960–1990, bands of sediments (parallel to the current shoreline) which were previously submerged, became exposed to air and consequently desiccated. We suggest that in order to approach new hydraulic equilibrium in some of those coastal areas, the decline in the level of the lake was followed by a lakeward advance of fresher groundwater from the shallow coastal aquifer. Those fresher waters are characterized by a higher pH than the interstitial brine, and therefore a new state of water-rock interaction is established which results in oxidative alteration of Mn-carbonates to Mn-oxides. In addition, manganese-oxidizing bacteria, shown to be active in water with lower salinity than that of the Dead Sea, may also play a part in oxidation of divalent manganese released from the sediment. As a result, some segments of the Dead Sea coast are characterized by black Mn-enriched sediments that in places form crusts over the surface.     

Factors responsible for genotypic manganese tolerance in cowpea (Vigna unguiculata)

In experiments with 29 cowpea genotypes considerable variation in Mn tolerance could be found. Ranking according to Mn tolerance was almost the same in sand and water culture. Mn tolerance is not related to greater vigour or exclusion of Mn from uptake and translocation, but depends mainly on the internal tolerance to excess Mn especially in the leaf tissue.Growth depression by Mn excess is characterized by local accumulatiòn of Mn, deposition of Mn oxides, and typical macro-symptoms on the older leaves (brown spotsclorosisshedding of the leaves). Autoradiographic studies with⁵⁴Mn and extraction of the leaves with methanol and H₂O indicate a causal relationship between Mn tolerance and the more homogenous distribution of Mn in the tissue. In tolerant genotypes local accumulation and deposition of Mn is inhibited or retarded.Mn applied to the petioles of fully expanded leaves induces the same toxicity symptoms on the leaf blades as Mn absorbed by the roots. There is a good agreement between the rankings of the different genotypes for Mn tolerance according to the depression of shoot dry matter production by Mn excess in long term pot experiments and the appearance of toxicity symptoms after application of Mn to the petioles.The regulation of Mn tolerance at the leaf tissue level allows a quick and non-destructive screening of large numbers of genotypes for Mn tolerance.     

A simple colorimetric determination of the manganese content in photosynthetic membranes

The functional Mn content of intact photosystem II membrane fragments was measured as 4.06 ± 0.13 Mn/reaction center when determined using a simple, sensitive colorimetric assay that will also work with thylakoids and core complexes. This procedure requires minimal sample material, does not need expensive assay equipment, requires four simple steps, and only takes 20–30 min to perform. These include (a) removal of the adventitious Mn ions by CaCl₂ treatment of the membranes, (b) extraction of the Mn from the O₂-evolving complex with hydrochloric acid, (c) purification of the extract by centrifugation followed by filtration of the supernatant through an Acrodisc syringe filter (0.2 μm nylon membrane), and (d) colorimetric determination of Mn in the extract using the reaction of the chromogenic agent, 3,3′,5,5′-tetramethylbenzidine, with previously oxidized Mn(II) cations carried out at high pH. The colorimetric assay itself has been used previously by Serrat (Mikrochim Acta 129:77–80, 1998) for assaying Mn concentrations in sea water and drinking water.     

Phytoplankton cell size and the development of microenvironments

Abstract The effect of cell size on the development of extracellular microenvironments of pH produced by individual photosynthesizing phytoplankton cells was investigated. The presence of pH microenvironments was determined by detection of a chemical reaction known to occur in microenvironments of high pH produced by algal photosynthesis, specifically the extracellular oxidation of Mn(II) to MnO_x. The dye leukoberbelin blue was used to detect the reaction. It was experimentally determined that individual algal cells larger than 20 μm (length and/or width) produced microenvironments, while smaller cells did not unless present as cell aggregates larger than 20 μm. A mathematical model is presented and discussed.