Spore-forming bacteria in soil cultivated with GM white poplars: Isolation and characterization

The impact of transgenic white poplars (Populus alba L. cv. ‘Villafranca’) was assessed on the soil aerobic spore-forming bacteria (SFB). The genetically modified poplars, expressing either the StSy gene for resveratrol production or the bar gene for herbicide tolerance, were cultivated in greenhouse. The occurrence of SFB was monitored in soil samples collected at eight different timepoints over a two-year period. The total culturable bacterial population of the StSy and bar trials underwent significant seasonal fluctuations in the range of 10⁶−2.5 × 10⁸ CFU/g dry soil and of 10⁴−5 × 10⁸ CFU/g dry soil, respectively. Changes occurred also within the culturable SFB population with size varying at 10³−5 × 10⁴ CFU/g dry soil and 10²−2 × 10⁵ CFU/g dry soil in the StSy and bar trials, respectively. No significant differences in the size of the total and SFB culturable populations were observed when comparing each transgenic line with the nontransformed control line while seasonal shifts of soil bacterial populations were evident in both trials. The culturable SFB fraction included three isolates (SFB-1, SFB-2 and SFB-3) classified by 16S rDNA sequence analysis as members of the Bacillus genus. According to the reported data, cultivation of both herbicide-resistant and resveratrol-producing GM white poplars did not affect the culturable SFB population at the soil level.     

Recovery of useful traits from isolates inhabiting an agricultural soil cultivated with herbicide-resistant poplars

The aim of this study was to investigate the culturable bacteria living in soil cultivated with Basta-tolerant transgenic white poplars (Populus alba L. 'Villafranca'). Plate Count Agar medium containing phosphinothricin, the active component of Basta, was used to isolate the herbicide-resistant bacteria (HRB). No significant changes in the size of the soil microbial flora following herbicide treatment were observed. The characterization of HRB isolates by 16S rDNA-based taxonomy revealed a predominance of Pseudomonas and Bacillus species. The screening carried out on soil samples allowed for the recovery of isolates with useful properties for biotechnological and agronomical purposes, particularly in relation to root development. Among the tested isolates, only HRB-1b, HRB-1c, and HRB-7 showed remarkable swarming ability, a valuable trait supporting the beneficial plant-microbe interactions. HRB-1c was also characterized by consistent production of indoleacetic acid (17.8 +/- 0.09 microg x mL-1 x (OD600 unit)-1), and it was able to stimulate the in vitro growth of Villafranca explants. Since novel tools are constantly required to enhance productivity of perennial species and to expand their use for practical purposes, the availability of bacteria that support tree growth, such as the HRB-1c isolate, represents a significant advantage.     

Tylosin-resistant bacteria cultivated from agricultural soil

In this study we analyzed the numbers and types of cultivable tylosin-resistant bacteria from six agricultural soils that differed with respect to their association with subtherapeutic antibiotic use. The proportion of tylosin-resistant bacteria to the total number of bacteria cultivated was significantly higher (7.2-16.5%) at three sites affected by subtherapeutic antibiotic use compared to three sites unaffected by subtherapeutic antibiotic use (0.7-2.5%). We also detected differences in the types of cultivable tylosin-resistant bacteria. At a site affected by subtherapeutic antibiotic use, we detected tylosin-resistant bacteria from the alpha- and beta-subdivisions of Proteobacteria. In contrast, at a site unaffected by subtherapeutic use, we detected only Streptomyces-like (high-G+C Gram-positive) tylosin-resistant bacteria. Our results suggest a link between subtherapeutic use of antibiotics and the numbers and types of antibiotic-resistant bacteria in nearby soil. However, other factors, such as soil type and temporal variation, may have also contributed to the differences observed.     

Fertile transgenic Lotus corniculatus resistant to the non‐selective herbicide phosphinothricin

Resistance to the non‐selective herbicide dl ‐phosphinothricin (PPT) was introduced into commercial Lotus corniculatus cv. Bokor by co‐cultivation of cotyledons with Agrobacterium tumefaciens AGL1 harbouring the binary vector pDM805 which contains the bialaphos resistance gene (bar) from Streptomyces hygroscopicus encoding phosphinothricin acetyltransferase (PAT) and the uidA gene encoding β‐glucuronidase. The half‐cotyledon explants were precultured on regeneration Murashige and Skoog's (MS) medium supplemented with 6‐benzyladenine (BA) and 1‐naphthaleneacetic acid (NAA) at 0.5 mg L^?1 each, 3 days prior to infection. Upon co‐cultivation, the explants were cultured on PPT‐free regeneration medium for 10 days, and then subcultured on regeneration/selection media with increasing PPT concentrations (5–7 mg L^?1) for about 18 weeks. Out of 480 initially co‐cultivated explants, 272 regenerated shoots survived the entire PPT selection procedure. Resistant shoots were grown further, multiplied by tillering that was additionally promoted by PPT and rooted on hormone‐free MS medium containing 5 mg L^?1 PPT. Established shoot cultures, continuously maintained on the same medium, have preserved PPT resistance up to now (more than 2 years). Transformed plants assessed in vitro and in a greenhouse were tolerant to the herbicide PPT at 300 mg L^?1 equivalent to more than twofold the recommended field dosage for weed eradication. Applied PPT treatment did not affect the activities of glutamine synthetase (GS; EC 6.3.1.2) and NADH‐dependent glutamate dehydrogenase (NADH‐GDH; EC 1.4.1.2) in transformed plants. However, PPT did increase the mobility of glutamine synthetase isoforms GS1 and GS2 as well as the inhibition of an additional high mobility GS (hmGS) activity. In untransformed plants, PPT treatment reduced total GS activity by 4.4‐fold while contrary the activity of NADH‐GDH was increased by ninefold. All transformed herbicide‐resistant plants were phenotypically normal and exhibited genomic stability, as were the untransformed plants analysed by flow cytometry. Under greenhouse conditions, they grew to maturity, flowered and set seeds. Stable integration and expression of the bar gene in T0 and T1 plants were confirmed by Southern and Western blot analysis, while integration of the reporter uidA gene did not occur. The bar gene was inherited in a Mendelian fashion by the progeny, as detected by PPT resistance. The production of PPT‐resistant plants may have significant practical applications in weed control in fields of L. corniculatus.     

Lignification in transgenic poplars with extremely reduced caffeic acid O-methyltransferase activity

Transgenic poplars (Populus tremula x Populus alba) were obtained by introduction of a sense homologous transgene encoding caffeic acid O-methyltransferase (COMT) under the control either of the cauliflower mosaic virus double 35S promoter or of the eucalyptus cinnamyl alcohol dehydrogenase promoter. Although these constructs conferred a moderate overexpression of COMT in some lines, a transgenic line with the double 35S promoter was found where COMT activity in woody tissues was close to zero due to a gene-silencing phenomenon. For the first time in COMT down-regulated trees, this alteration substantially reduced lignin level in 6-month-old trees (17% decrease). Lignin structure was found to be strongly altered, with a two times higher content in condensed bonds, an almost complete lack of syringyl units, and the incorporation of 5-hydroxyguaiacyl units to the most remarkable extent reported so far. Consistent with the higher cellulose content and with the higher condensation degree of the lignin, the impact of the transformation on the kraft-pulping performances of the poplar trees positively affected the pulp yield (10% relative increase), but made lignins less amenable to industrial degradations.     

Regeneration of herbicide resistant transgenic rice plants following microprojectile-mediated transformation of suspension culture cells

Summary Suspension cells of Oryza sativa L. (rice) were transformed, by microprojectile bombardment, with plasmids carrying the coding region of the Streptomyces hygroscopicus phosphinothricin acetyl transferase (PAT) gene (bar) under the control of either the 5 region of the rice actin 1 gene (Act1) or the cauliflower mosaic virus (CaMV) 35S promoter. Subsequently regenerated plants display detectable PAT activity and are resistant to BASTA^TM, a phosphinothricin (PPT)-based herbicide. DNA gel blot analyses showed that PPT resistant rice plants contain a bar-hybridizing restriction fragment of the expected size. This report shows that expression of the bar gene in transgenic rice plants confers resistance to PPT-based herbicide by suppressing an increase of ammonia in plants after spraying with the herbicide.     

转基因抗虫抗除草剂棉花对棉铃虫抗性及对草甘膦耐受性研究

本论文研究了抗虫又抗除草剂棉花对草甘膦的耐受程度,比较了这一双抗性状的棉花与单抗虫棉的抗虫效果。结果表明,抗虫又抗除草剂棉花对草甘膦有较好的耐受性,四叶期喷施草甘膦后抗虫抗除草剂棉花可以安全生长,蕾期喷施草甘膦对棉花的开花率和结铃率有影响。抗虫又抗除草剂棉花和单抗虫棉对棉铃虫Helicoverpa armigera(Hübner)均具有较好的防治效果,苗期棉花叶片对棉铃虫防治效果最好,后期防治效果下降到49.2%和46.6%,吐絮期防治效果又上升到57.0%和53.1%。     

Glyphosate tolerance and effects of cotton bollworms on transgenic herbicide and insect resistant cotton

本论文研究了抗虫又抗除草剂棉花对草甘膦的耐受程度,比较了这一双抗性状的棉花与单抗虫棉的抗虫效果.结果表明,抗虫又抗除草剂棉花对草甘膦有较好的耐受性,四叶期喷施草甘膦后抗虫抗除草剂棉花可以安全生长,蕾期喷施草甘膦对棉花的开花率和结铃率有影响.抗虫又抗除草剂棉花和单抗虫棉对棉铃虫Helicoverpa armigera(Hübner)均具有较好的防治效果,苗期棉花叶片对棉铃虫防治效果最好,后期防治效果下降到49.2％和46.6％,吐絮期防治效果又上升到57.0％和53.1％.     

我国抗虫转基因杨树生态安全性研究进展

转基因树木与农作物相比, 人们更关注其长时间种植可能导致转基因扩散到周围野生近缘种。由于生长周期长, 转基因树木会增加转基因不稳定性, 对非靶标生物的影响, 靶标害虫对转基因植物产生抗性, 增加树木入侵性(杂草化), 以及由于基因漂移或基因逃逸对环境产生的负面影响或新的环境风险。过去十几年, 针对我国抗食叶害虫的两个商业化转Bt基因欧洲黑杨(Populus nigra)和转双抗虫基因741杨[P. alba× (P. davidiana + P. simonii) × P. tomentosa], 已开展了有关生态安全性方面的多项研究。本文围绕抗虫转基因树木生态安全性研究进展进行了综述。抗虫转基因杨树对节肢动物种群和群落结构产生了一定影响, 使昆虫的多样性提高, 但对土壤微生物区系未见明显影响。转基因欧洲黑杨通过花粉和种子发生的基因漂移几率很低。转基因杨树通过内生菌发生的水平转移可能会对环境造成的潜在危险也进行了评价。文章最后指出对抗虫转基因杨树农林复合生态系统开展生物安全研究的必要性。     

UV-B辐射增强对抗除草剂转基因水稻 CH4排放的影响

在大田条件下,研究了UV-B(ultraviolet-B)辐射增强对抗除草剂转基因水稻及亲本常规水稻甲烷(CH4)排放的影响。UV-B辐射设2水平,即对照(CK,自然光),增强(Elevated,14.4 kJ·m-·2d-1),相当于南京地区大气臭氧耗损25%的辐射剂量。结果表明,UV-B辐射增强并没有改变稻田CH4排放通量的季节性变化规律。与对照相比,UV-B辐射增强显著提高CH4排放通量和累积排放量。水稻分蘖期CH4累积排放量最高,占全生育累积排放量的51.55%—61.01%;其次是拔节至孕穗期,占20.00%—26.64%。抗除草剂转基因水稻的CH4排放通量和累积排放量显著低于亲本常规水稻。研究说明,UV-B辐射增强下种植抗除草剂转基因水稻对于减缓稻田甲烷排放有积极意义。     

Production of transgenic pea (Pisum sativum L.) plants resistant to the herbicide pursuit

Transgenic pea (Pisum sativum L.) plants containing mutant ahas/als gene were obtained using Agrobacterium-mediated genetic transformation. Transformation has been carried out using cocultivation of pea explants with Agrobacterium tumefaciens strain lBA4404 carrying genetic vectors pCB004, pCB006 and pCB007 containing ahas/als and nptII genes. The presence of transferred genes in the genomes of transgenic plants has been confirmed by PCR analysis.     

Utilization of the herbicide phosphinothricin as a nitrogen source by soil bacteria

Summary Rhodococcus sp., Pseudomonas paucimobilis and five other bacterial soil isolates were found to be capable of utilizing the l-enantiomer of the herbicide phosphinothricin (2-amino-4-(methylphosphinyl)-butanoic acid) as a nitrogen source. This deamination yielded the structural analogue, 2-oxo-4-(methylphosphinyl)-butanoic acid as the main catabolite of phosphinothricin. On prolonged incubation, slow decarboxylation of the main catabolite occurred with the formation of the stable degradation product 3-methylphosphinico-propanoic acid.     

Effect of aeration on ethylene production by soil bacteria and soil samples cultivated in a closed system

Summary Ethylene production was studied in shaken cultures ofPseudomonas putida andPseudomonas fluorescens isolated from soil and in unsterile garden soil samples moistened to 60% of the water holding capacity. The highest ethylene accumulation in bacterial cultures was reached under conditions of delayed aeration,i.e. when the culture was closed and the aeration started after the oxygen content decreased to 4%. The ethylene production rose immediately after the beginning of aeration. Under these conditions ethylene production was inP. fluorescens 2–3 times and in glucosecultivatedP. putida 6 times higher than in the fully aerated cultures. Methionine stimulated ethylene production byP. fluorescens, whereas glucose proved to be more suitable forP. putida. This strain was incapable of growth on methionine as the sole carbon source. Samples of nonsterile garden soil produced the highest amounts of ethylene under anaerobic conditions. Artificial inoculation of soil samples byP. putida resulted in an increase of ethylene formation in samples with delayed aeration. Addition of glucose or glucose with methionine stimulated ethylene production in all soil samples.     

转BPH9和Bar基因抗褐飞虱耐除草剂水稻‘H23’对非靶标生物的影响

为探明转BPH9和Bar基因抗褐飞虱耐除草剂水稻‘H23’对非靶标生物安全性的影响, 本文以‘H23’的非转基因亲本改良的‘广占63-4S’为对照, 比较二者对二化螟(Chilo suppressalis)、大型蚤(Daphnia magna)和赤子爱胜蚓(Eisenia foetida)的影响。其中, 对二化螟采用水稻稻苗饲养法, 观察接虫后6 d二化螟的存活情况, 并称取活虫体重; 对大型蚤采用水稻粉液饲喂法, 考察28 d大型蚤的存活率、繁殖数等指标; 对赤子爱胜蚓则用添加水稻秸秆的人工土壤培养法, 考察28 d内赤子爱胜蚓的存活、体重和行为情况。结果表明, 与受体对照‘广占63-4S’相比, 转BPH9和Bar基因抗褐飞虱耐除草剂水稻‘H23’对二化螟、大型蚤和赤子爱胜蚓均无显著影响, 可以认为, 短期内转BPH9和Bar基因水稻‘H23’对这3种非靶标生物无明显的生态风险。     

Isolation and characterization of endophytic bacteria from soybean (Glycine max) grown in soil treated with glyphosate herbicide

Endophytic bacteria are ubiquitous in most plant species influencing the host fitness by disease suppression, contaminant degradation, and plant growth promotion. This endophytic bacterial community may be affected by crop management such as the use of chemical compounds. For instance, application of glyphosate herbicide is common mainly due to the use of glyphosate-resistant transgenic plants. In this case, the bacterial equilibrium in plant–endophyte interaction could be shifted because some microbial groups are able to use glyphosate as a source of energy and nutrients, whereas this herbicide may be toxic to other groups. Therefore, the aim of this work was to study cultivable and noncultivable endophytic bacterial populations from soybean (Glycine max) plants cultivated in soil with and without glyphosate application (pre-planting). The cultivable endophytic bacterial community recovered from soybean leaves, stems, and roots included Acinetobacter calcoaceticus, A. junii, Burkholderiasp., B. gladioli, Enterobacter sakazaki, Klebsiella pneumoniae, Pseudomonas oryzihabitans, P. straminea, Ralstonia pickettii,and Sphingomonassp. The DGGE (Denaturing Gradient Gel Electrophoresis) analysis from soybean roots revealed some groups not observed by isolation that were exclusive for plants cultivated in soil with pre-planting glyphosate application, such as Herbaspirillum sp., and other groups in plants that were cultivated in soil without glyphosate, such as Xanthomonas sp. and Stenotrophomonas maltophilia. Furthermore, only two bacterial species were recovered from soybean plants by glyphosate enrichment isolation. They were Pseudomonas oryzihabitans and Burkholderia gladioliwhich showed different sensibility profiles to the glyphosate. These results suggest that the application at pre-planting of the glyphosate herbicide may interfere with the endophytic bacterial communitys equilibrium. This community is composed of different species with the capacity for plant growth promotion and biological control that may be affected. However, the evaluation of this treatment in plant production should be carried out by long-term experiments in field conditions.     

Employment of associative bacteria for the inoculation of barley plants cultivated in soil contaminated with lead and cadmium

In laboratory experiments, the rhizobacteria Azospirillum lipoferum 137, Arthrobacter mysorens 7, Agrobacterium radiobacter 10, and Flavobacterium sp. L30 were found to have a relatively high resistance to the toxic heavy metals lead and cadmium (except that strain L30 was found to be sensitive to Cd). When introduced by means of seed bacterization, the heavy metal-resistant strains actively colonized the rhizosphere of barley plants cultivated in uncontaminated and contaminated soils. In both pot and field experiments, seed bacterization improved the growth of barley plants and the uptake of nutrient elements from soil contaminated with Pb and Cd. The bacterization also prevented the accumulation of Pb and Cd in barley plants, thereby mitigating the toxic effect of these heavy metals on the plants.