中国南海北部陆坡沉积物古菌多样性及丰度分析

【目的】海洋沉积物中的古菌在全球生物地球化学循环中充当重要的角色,深入了解沉积物中古菌群落的结构及功能特征是探究海洋沉积物中古菌参与生物地球化学循环和生态学功能的基础。【方法】采用高通量测序技术,分别对南海北部陆坡不同海域(东部,西部和神狐海域的7个站位)沉积物中古菌16SrRNA基因进行Illumina Mi Seq测序。【结果】中国南海北部陆坡沉积物中古菌的主要门类是Bathyarchaeota、Thermoplasmata、Woesearchaeota(DHVEG-6)、Thaumarchaeota(Marine Group I)、Lokiarchaeota和Marine Hydrothermal Vent Group(MHVG),还存在少量的AK8、Marine Benthic Group A和Terrestrial Hot Spring Crenarchaeota Group(THSCG)等。在潜在水合物区沉积物中还发现了甲烷代谢相关古菌(Anaerobic methanotrophic archaea,ANME)类群,主要为ANME-1、ANME-2ab和ANME-2c等。甲烷代谢古菌的分布特征也从甲烷代谢保守功能基因mcr A(Methyl coenzyme-Mreductase A)的扩增中得到了验证。利用定量PCR对南海沉积物中的细菌、古菌的16SrRNA基因和mcrA基因进行了定量,发现细菌16SrRNA基因拷贝数为10~5-10~7 copies/g(湿重),古菌16SrRNA基因拷贝数为10~5-10~6 copies/g(湿重),潜在水合物区mcrA基因拷贝数为10~3-10~5 copies/g(湿重)。【结论】揭示了中国南海北部陆坡沉积物中具有丰富的微生物资源,其中古菌种类多样且丰度较高,同时发现冷泉特征古菌群落,为深入认识和理解南海沉积物中微生物丰度和古菌多样性,以及解析古菌地球化学功能奠定基础。     

南海环境微生物对聚球藻有机物质的响应

【背景】海洋浮游植物产生的有机物质与异养细菌之间的相互作用是上层海洋物质和能量循环过程中的重要组成部分。【目的】探究寡营养海域微生物群落对聚球藻有机物(Synechococcus-derived organic matter,SOM)的响应和代谢利用过程,加深对海洋微生物介导的生物地球化学循环过程的认识。【方法】利用南海海域微生物群落,添加聚球藻有机物质后黑暗培养,对培养过程中有机碳、营养盐和活性微生物群落结构的变化进行追踪。【结果】在短期的培养过程中,有60%-73%的SOM被微生物所利用。γ-变形菌(Gammaproteobacteria)在培养过程中响应最快,也是最优势微生物类群。SOM的加入改变了原位微生物群落结构,并且随着活性有机物质逐步被消耗,微生物群落结构也发生了演替。【结论】SOM中的大部分物质都属于活性有机物质,可以快速地被微生物所降解利用。不同微生物类群响应不同生物可利用性有机物质,推动了海洋物质和能量的循环。     

Dynamics of Autotrophic Marine Planktonic Thaumarchaeota in the East China Sea

The ubiquitous and abundant distribution of ammonia-oxidizing Thaumarchaeota in marine environments is now well documented, and their crucial role in the global nitrogen cycle has been highlighted. However, the potential contribution of Thaumarchaeota in the carbon cycle remains poorly understood. Here we present for the first time a seasonal investigation on the shelf region (bathymetry≤200 m) of the East China Sea (ECS) involving analysis of both thaumarchaeal 16S rRNA and autotrophy-related genes (acetyl-CoA carboxylase gene, accA). Quantitative PCR results clearly showed a higher abundance of thaumarchaeal 16S and accA genes in late-autumn (November) than summer (August), whereas the diversity and community structure of autotrophic Thaumarchaeota showed no statistically significant difference between different seasons as revealed by thaumarchaeal accA gene clone libraries. Phylogenetic analysis indicated that shallow ecotypes dominated the autotrophic Thaumarchaeota in the ECS shelf (86.3% of total sequences), while a novel non-marine thaumarchaeal accA lineage was identified in the Changjiang estuary in summer (when freshwater plumes become larger) but not in autumn, implying that Changjiang freshwater discharge played a certain role in transporting terrestrial microorganisms to the ECS. Multivariate statistical analysis indicated that the biogeography of the autotrophic Thaumarchaeota in the shelf water of the ECS was influenced by complex hydrographic conditions. However, an in silico comparative analysis suggested that the diversity and abundance of the autotrophic Thaumarchaeota might be biased by the ‘universal’ thaumarchaeal accA gene primers Cren529F/Cren981R since this primer set is likely to miss some members within particular phylogenetic groups. Collectively, this study improved our understanding of the biogeographic patterns of the autotrophic Thaumarchaeota in temperate coastal waters, and suggested that new accA primers with improved coverage and sensitivity across phylogenetic groups are needed to gain a more thorough understanding of the role of the autotrophic Thaumarchaeota in the global carbon cycle.     

南海北部表层沉积物中原核微生物多样性

[目的]为研究南海北部沉积物原核微生物的多样性和群落结构.[方法]从南海北部XSCS13站位表层沉积物中扩增古菌和细菌的16S rDNA并构建文库,随机挑出阳性克隆子进行测序,选出所有的OTU构建系统进化树,进行系统发育学分析.[结果]多数克隆子来自于未培养原核微生物,沉积物中的古菌分属3大门类:泉古菌(Crenarchaeota)、奇古菌(Thaumarchaeota)和广古菌(Euryarchaeota),其中泉古菌(Crenarchaeota)为主要门类,占71％;广古菌(Euryarchaeota)最少,只有3个克隆子.泉古菌(Crenarchaeota)又以MG Ⅰ为主要类群,占61％.细菌多样性明显高于古菌,共9个门类:变形杆菌(Proteobacteria)(32.6％)、疣微菌(Verrucomicrobia)(3.0％)、拟杆菌门(Bacteroidete)(5.2％)、酸杆菌(Acidobacteria)(4.4％)、绿弯菌(Chloroflexi)(6.0％)、厚壁菌(Firmicute)(3.7％)、浮霉菌(Planctomycete)(5.2％)、芽单胞菌(Gemmatimonadete)(11.1％)、放线细菌(Actinobacteria)(4.4％).变形杆菌为优势类群(包括α-Proteobacteria、γy-Proteobacteria和δ-Proteobacteria 3个亚群),其中γ-Proteobacteria是Proteobacteria中的优势种群,占54.5％.另外所有原核微生物总共有超过50％的克隆子与硫酸盐的还原以及甲烷的形成相关.[结论]结果表明南海北部XSCS13站位表层沉积物中原核微生物的多样性非常丰富,其中蕴含大量未知的微生物资源;另外古菌和细菌群落结构表明该位点可能处于富含甲烷的冷泉活动区.     

东海北部滨海湿地铁氧化细菌的分布及其对不同氧气穿透深度的响应

【目的】滨海湿地生态系统位于淡水与海水交互地带,含有高浓度Fe²⁺的地下水渗透到沉积物表层形成的湿地径流和周期性潮汐淹水形成的含氧-缺氧界面有利于铁氧化细菌介导的Fe²⁺的生物氧化过程发生。然而,目前缺乏对滨海湿地生态系统中铁氧化细菌类群的全面评估。【方法】以上海崇明西沙湿地公园及浙江舟山市朱家尖岛东沙沙滩两地共5处滨海湿地沉积物为研究对象,分析沉积物的氧气穿透深度等环境参数,并基于16S rRNA基因扩增子测序技术,全面解析不同滨海湿地生态系统中细菌与铁氧化细菌的群落组成与分布特征。【结果】与崇明西沙湿地相比,朱家尖岛东沙沙滩有更深的氧气穿透深度,达到10 mm以上。非度量多尺度分析(non-metric multidimensional scaling, NMDS)统计结果表明,细菌群落结构主要受到区域位置不同导致的环境条件差异的影响,而铁氧化细菌的群落结构则受到采样的区域位置和沉积物氧气穿透深度的共同影响。崇明西沙湿地和朱家尖岛东沙沙滩的优势细菌为蓝细菌门(Cyanobacteria)、γ-变形菌纲(Gammaproteobacteria)、拟杆菌门(Bacteroidetes)、α-变形菌纲(Alphaproteobacteria)和放线菌门(Actinobacteria);优势铁氧化细菌为嘉利翁氏菌属(Gallionella)、红细菌属(Rhodobacter)、Lepthothrix和Sideroxydans。【结论】通过对崇明西沙湿地和朱家尖岛东沙沙滩沉积物中栖息的铁氧化菌的调查发现,铁氧化细菌的群落组成与湿地沉积物类型导致的氧气穿透深度差异具有密切联系。     

南海陆坡沉积物细菌丰度预测

分别利用参数模型和无参数估计法预测南海陆坡沉积物柱MD05-2896中的细菌丰度.基于非培养的PCR-RFLP的16SrRNA基因分子技术,扩增了沉积物柱中的细菌16S rRNA基因序列,并构建16S rRNA基因文库.系统发育分析表明16S rRNA基因文库中,大多数序列属于17个已知的“门”.分别以99％、97％、90％和80％序列一致性作为分类单元分界点,将16SrRNA基因序列组群为分类单元.使用逆高斯分布模型、对数正态分布模型、负二项式分布模型、帕雷托分布模型、双指数分布模型以及ACE、ACE-1等估计方法预测不同分类单元分类水平下的细菌丰度.结果表明在“种”级分类水平上,负二项式分布为最优估计模型,估计细菌丰度为244±10(SE).不过,受实验条件的限制,该估计值可能偏低.     

Spatial structure of eukaryotic ultraplankton community in the northern South China Sea

Spatial distribution, diversity and composition of eukaryotic ultraplankton community of the northern South China Sea (nSCS) surface water and the relationship with the in situ water environment were investigated by the method of polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE). A total of 18 DGGE intensive bands were detected and the sequence analysis of these DGGE bands revealed that Alveolata was the dominant eukaryotic ultraplankton group of surface water in the nSCS (50%). Other species belonged to Bicoecea, Bolidophyceae, Polycystinea and Chlorophyta, which accounted for less proportion of eukaryotic ultraplankton in the study area. Unweighted pair group method with arithmetic averages clustering of the sampling stations indicated that all stations were classified mainly based on geographical proximity. Redundancy analysis (RDA) was employed to further investigate the relationships between DGGE band pattern and the environmental variables. Based on the RDA analysis, temperature, salinity, phosphorus and silicate were the important factors to shape the eukaryotic ultraplankton community composition in the nSCS.     

Spatial and temporal distribution of nanoflagellates in the northern South China Sea

Seasonal variation, horizontal and vertical distribution, and cell size of nanoflagellates, together with physico-chemical and biological factors, were studied in the northern South China Sea (SCS). It was found that nanoflagellate abundance ranged from 0.157 × 10³ to 9.193 × 10³ cells/ml (with a mean of 0.891 × 10³) in winter (February, 2004), while it ranged from 0.107 × 10³ to 5.417 × 10³ cells/ml (with a mean of 0.599 × 10³) in summer (July, 2004). Nanoflagellates were more abundant in winter than summer in offshore regions, showing an unique seasonal pattern in this subtropical marginal sea. The abundance of nanoflagellates decreased from the estuary to the offshore region. Vertical distribution of nanoflagellates coupled well with that of bacteria and Chl a. The small size fraction of less than 5 μm dominated the nanoflagellate populations. Wind-driven mixing, eddies, availability of nutrients as well as Chl a and abundance of picoplankton seemed to be the major controlling factors for the spatial distribution and seasonal variation of nanoflagellates in the study area. Handling editor: P. Tasman     

南海北部浮游桡足类对浮游植物的摄食压力

于2004年2月(冬季)和8月(夏季)在南海北部使用肠道色素法研究了浮游桡足类群落对浮游植物现存量的摄食压力。将底到表垂直拖网(网孔径200μm)获得的桡足类分为中型(>500μm)和小型(200~500μm)两个体长组。冬季:中型桡足类的丰度为103~2343(平均633)ind/m3,肠道色素为0.15~2.71(平均1.31)ng/ind,肠道排空率为0.011(A4)~0.019(C1)min-1,个体摄食率为3.13~58.48(平均28.36)ng/(ind.d),群落摄食率为1902~62369(平均18679)ng/(d.m3),对浮游植物生物量的摄食压力为每天0.25%~6.39%(平均3.04%)。小型桡足类的丰度为418~6250(平均1691)ind/m3,肠道色素为0.18~3.44(平均1.19)ng/ind,肠道排空率为0.012(A4)~0.016(C1)min-1,个体摄食率为3.67~70.04(平均24.34)ng/(ind.d),群落摄食率为1540~158561(平均44227)ng/(d.m3),对浮游植物生物量的摄食压力为每天0.44%~15.70%(平均6.59%)。浮游桡足类群体对浮游植物生物量的摄食压力为每天1.02%~20.10%(平均9.63%)。夏季:中型桡足类的丰度为111~1298(平均621)ind/m3,肠道色素分别为0.22~1.58(平均1.03)ng/ind,肠道排空率为0.017min-1,个体摄食率为5.52~39.92(平均25.95)ng/(ind.d),群落摄食率为4411~26667(平均12878)ng/(d.m3),对浮游植物生物量的摄食压力为每天0.23%~6.52%(平均2.52%)。小型桡足类的丰度为756~8804(平均2990)ind/m3,肠道色素含量为0.09~2.92(平均0.87)ng/ind,肠道排空率为0.020min-1,个体摄食率为2.73~87.77(平均26.26)ng/(ind.d),群落摄食率为9309~139817(平均47191)ng/(d.m3),对浮游植物生物量的摄食压力为0.86%~37.79%(平均10.99%)。浮游桡足类群体对浮游植物生物量的摄食压力为1.09%~39.95%(平均13.51%)。数据表明,2月份和8月份桡足类群体对浮游植物现存量的摄食压力较低,桡足类摄食不是南海北部浮游植物死亡的主要原因。     

南海北部海域Synechococcus和Prochlorococcus生长率和被摄食消亡率——变化范围及其与环境因子的关系

2004年首次在南海北部海域使用选择性代谢抑制剂技术进行了Synechococcus和Prochlorococcus生长率和被摄食消亡率的研究.研究结果表明,ynechococcus高丰度值出现在次表层（15 m或20m）,位于温跃层之上,高生长率往往出现在丰度最大值水层上方;Prochlorococcus丰度在夏季出现次表层最大值,与温跃层深度基本一致,表层生长率高于真光层底部.Synechococcus真光层平均生长率为0.11～1.18 d^-1,被摄食消亡率为0.11～0.76 d^-1,分布格局均为从沿岸向外海方向升高.Prochlorococcus真光层平均生长率为0.23～0.49 d^-1,存在较明显的季节变化,夏季近岸略高于外海,而冬季的趋势正好相反;真光层平均被摄食消亡率为0.12～0.33 d^-1,冬夏两季均是近岸高于外海。温度、营养盐和光是影响Synechococcus生长率变化的重要因子.Synechococcus和Prochlorococcus丰度与群落生长率之间不存在相关关系,而与被摄食消亡率之间则存在显著的指数相关.根据Synechococcus和Prochlorococcus的生长率估算了它们的生产力及其对Pico-生产力的贡献.     

Coccolith evidence for Quaternary nutricline variations in the southern South China Sea

Nutricline variations during the last 1560 ka in the southern South China Sea are reconstructed using the relative abundance of the coccolithophore Florisphaera profunda in ODP Site 1143. Nutricline depth shows both long-term large magnitude variation and high frequency glacial–interglacial variation. On the long-term scale, the nutricline experienced four significant changes, which occurred at 900, 480, 250, and 50 ka respectively. According to these changes, five stages could be recognized during the last 1560 ka. From 1560 to 900 ka, the nutricline depth increased gradually. Around 900 ka, the nutricline abruptly shallowed and then remained stable until 480 ka. The nutricline was shallow during the time interval between 480 and 250 ka. At 250 ka, it deepened again and increased gradually until 50 ka. After 50 ka, the nutricline depth decreased gradually to modern values. On the glacial–interglacial scale, the variations in nutricline depth show different patterns before and after 900 ka. Before 900 ka, the nutricline was deep during glacial periods and shallow during interglacials. However, after 900 ka, the nutricline was deep during interglacials and shallow during glacials. Spectral analysis of the relative abundance of F. profunda shows a similar trend. In addition to the eccentricity (113, 76 ka), obliquity (55, 39 ka), and precession (24, 19 ka), we also find a 431 ka cycle. The former three periods reflect glacial–interglacial variations in nutricline, and the period of 431 ka reflects long-term variations in nutricline. We suggested that the variations in nutricline in the southern South China Sea were caused by global and regional climate changes. Glacial–interglacial variations in nutricline are mainly controlled by the East Asian monsoon, and the long-term variations might be related to the global climatic events, such as the mid-Pleistocene Revolution and the mid-Brunhes event.     

Distribution of polycystine radiolarians in the northern South China Sea in September 2005

We studied the distribution of polycystine radiolarians in the northern South China Sea (SCS) in September 2005 in order to document the relation between radiolarian assemblages and environmental parameters. Vertical plankton tows were collected at depth-intervals from 0 to 250 m at thirteen stations, using a closing net (62 µm mesh). The highest abundance of polycystine radiolarians generally occurred at depths of 0–75 m, i.e., above the chlorophyll-a maximum and thermocline. In contrast, the maximum polycystine abundance occurred below the chlorophyll-a maximum at station E105 (75–150 m), possibly as a result of down-welling of warm waters, and the maximum fell within the chlorophyll-a maximum at station E702, as a result of upwelling of intermediate cold waters.During our sampling period, the southwestern monsoon caused upwelling in the northern SCS (the Taiwan Bank region), as shown by the high abundance of Tetrapyle octacantha, Acanthodesmia vinculata, Cladococcus cervicoris, Octopyle octospinosa, Spongaster tetras, Streblacantha circumtexta and Spongotrochus glacialis. The patterns of distribution and the abundances of the species Botryocyrtis scutum, Pterocorys hertwigii, Collosphaera tuberosa and Didymocyrtis tetrathalamus tetrathalamus suggested that western Equatorial Pacific waters did not yet influence the region at the time of sampling; the first two species were dominant in the northern SCS during our sampling. The species Cornutella profunda and Cyrtopera laguncula were rare at depths of 150–250 m in the tropical region of the SCS, and assemblages in northern and southern SCS were very similar. The relative abundance of B. scutum and P. hertwigii is an indicator for seasonal changes in monsoonal circulation.     

大亚湾裸甲藻种群的季节变化与环境条件的关系

研究了大亚湾1997年7月至1998年6月裸甲藻种群季节变化及其与环境因子的关系。裸甲藻在大亚湾主要出现在4－5月份,并在4月至5月份出现了4个密度高峰,最高密度可达每毫升996个细胞,6月至9月份偶有出现,10月至2月份则未出现。裸甲藻高密度出现的温度、盐度范围分别为25－30℃和24‰-32‰。裸甲藻在大亚湾的出现及4、5月份的密度高峰与水温的季节变化密切相关,3月份水温存在一个急升期,水温由3月初的15.5℃以下上升至3月底的23.5℃左右,为裸甲藻种群密度的急剧增长提供了合适的温度条件。大亚湾盐度的季节波动较小,与裸甲藻种群的种群的季节变化无关。大亚湾氮、磷、硅等营养物质含量丰富,不存在营养元素缺乏,但高密度的裸甲藻种群仅在氮、磷含量及氮磷比分别为50－100μg/L,5-20μg/L和5－30范围内出现,氮、磷、硅3种营养盐的含量及它们之间的比值特别是氮磷比是影响裸甲藻高密度出现的重要内容。     

气候环境因子和捕捞压力对南海北部带鱼渔获量变动的影响

带鱼(Trichiurus japonicas)是南海北部的重要经济鱼类,其渔获量的变化不仅与捕捞压力有关,还与气候环境变化有关.为了研究气候变化和捕捞对南海北部带鱼渔获量变动的影响,使用长时间序列渔业统计资料和气候变化数据对1956-2006年的南海北部带鱼渔获量变动进行了分析.南海北部的带鱼渔获量变化可划分成因捕捞效应所产生的趋势变化和因气候环境变化所导致的渔获量变动.捕捞效应所产生的趋势变化可用Fox模型拟合,Fox模型拟合结果显示南海北部带鱼渔获量与捕捞努力量关系显著(P＜0.01),说明捕捞压力的增长显著影响到南海北部带鱼渔获量的变化.移除捕捞效应所产生的趋势变化后,渔获量变动与中国南方降雨、南海北部海表水温、南海北部夏季季风以及南海北部冬季季风等气候因子呈显著正偏相关(P＜0.04),与热带气旋影响指数呈显著负偏相关(P＜0.03),这种相关说明南海北部带鱼渔获量变动还受气候环境因子的影响.南海北部带鱼渔获量可用捕捞努力量和气候变量来拟合,且拟合效果显著(R2=0.958,P＜0.01),表明南海北部带鱼渔获量的变动归因于捕捞压力的单调增长和气候环境的变化.在南海北部的捕捞压力维持在现有水平下,未来的气候变化和人类活动引起营养盐的增加都可能有利于南海北部带鱼渔业产量的增加,且由于未来极端天气事件的频繁发生,可能还会引起带鱼渔获量的变动幅度加剧.     

南海北部浮游植物生长对营养盐的响应

2004年夏季作者在南海北部海域研究了浮游植物生长的营养动力学,结合物理-化学过程对浮游植物生物量分布的影响与机制进行了研究,阐明了水平对流和中尺度涡对营养盐分布的影响及浮游植物生长和现存生物量对其的响应。受西南季风和东向沿岸流作用所形成的Ekman输送的影响,南海北部海岸带表层海水作离岸运动,使深层富含营养盐的冷水爬坡涌升到表层来补充,激发浮游植物生物量迅速增长。海区反气旋涡使海水辐聚下沉,造成水体具高温、低盐、高溶解氧浓度、低营养盐浓度和低浮游植物生物量。同时通过现场营养盐加富试验,发现该海域营养盐是浮游植物生长的主要限制因子,而且是多种营养元素共同限制了浮游植物的生长,添加单一的营养盐并不能促进浮游植物的生长。在生物量出现增长的试验组中,营养盐添加不仅促使浮游植物生物量的增长,而且也改变了浮游植物的粒级结构和群落结构。例如,在站S1008,培养前叶绿素a浓度为0.28 mg.m-3,加富培养60 h后浮游植物生物量在NP和NPSi的试验组中有显著的增加,叶绿素a浓度分别达1.07 mg.m-3和1.19 mg.m-3;培养前粒度分级叶绿素a主要以Pico级份占优势,而加富试验结束后,在NP和NPSi的试验组以Nano级份占优势,其它试验组仍以Pico级份占优势;同时,在培养后生物量出现增长的试验组,浮游植物群落的优势类群从甲藻向硅藻演替。     

夏、冬季南海北部浮游植物群落特征

对2009年7月19日—8月16日和2010年1月6—30日南海北部(18°—23.5°N、109°—120°E)两个航次的浮游植物样品应用Utermhl方法进行了分析鉴定。结果如下:夏季样品鉴定浮游植物4门72属150种,浮游植物细胞丰度范围为(0.16—6001.78)×103个/L,平均细胞丰度为26.49×103个/L,硅藻的平均细胞丰度为25.81×103个/L,主要优势种属有铁氏束毛藻(Trichodesmium thiebautii)、菱形海线藻(Thalassionema nitzschioides)、柔弱伪菱形藻(Pseudo-nitzschia delicatissima)及裸甲藻(Gymnodinium spp.)等;冬季样品鉴定浮游植物4门58属168种,浮游植物细胞丰度范围为(0.08—37.52)×103个/L,浮游植物平均细胞丰度为2.69×103个/L,硅藻的平均细胞丰度为2.49×103个/L,主要优势物种为菱形海线藻、伏氏海线藻(Thalassionema frauenfeldii)及短刺角毛藻(Chaetoceros messanensis)等;夏季调查区5m层浮游植物细胞丰度的平面分布由近岸到外海迅速减少,高值区主要在广东东部近岸及海南东部近岸;冬季则在珠江口近岸和海盆区出现较高值。两次调查中,浮游植物细胞丰度在浅水站位(200m)远高于深水站位(200m);较冬季相比,夏季浮游植物平均细胞丰度偏高,但物种丰富度却略偏低。夏、冬季浮游植物的香农-威纳多样性指数平均值分别为2.12和2.36,Pielou均匀度指数平均值分别为0.79和0.81。两个航次调查中,浮游植物细胞丰度均与盐度表现出显著性负相关性;在冬季还与磷酸盐浓度表现出显著性负相关性。     

夏季南海北部纤毛虫群落组成及其水平分布

在2007年中国科学院南海海洋研究所南海北部开放航次期间,设计了两条纤毛虫采样断面(X断面、Y断面),共13个站位,涵盖了珠江冲淡水区、粤东上升流区和陆坡开阔海区,旨在对纤毛虫的种类组成和空间分布及其影响因素进行探讨。共检出4纲8目22属38种纤毛虫,其中种类数最多的属是砂壳目拟铃虫属(9种),其次是急游目急游属(5种)。本航次中纤毛虫主要是砂壳目纤毛虫(27种),共鉴定出砂壳虫15属27种。纤毛虫优势种为蚤状中缢虫Mesodinium pulex(18.1%),其次是丁丁急游虫Strombidium tintinnodes(9.7%),盾形拟铃虫Tintinnopsis urula(5.8%)。纤毛虫种类数和丰度从近岸向外海逐渐减少,纤毛虫种类数与温度(R2=0.53,P0.05)和盐度(R2=0.43,P0.05)呈负相关,随着温度的升高,纤毛虫种类数逐渐降低。纤毛虫丰度与温度和盐度相关性并不明显,这可能由于受上升流的影响,近岸上升流高盐区存在着纤毛虫丰度较为丰富的情况。叶绿素a浓度与纤毛虫种类数(R2=0.36,P0.05)和纤毛虫丰度(R2=0.36,P0.05)呈正相关,近岸浮游植物生物量高,纤毛虫种类丰富,丰度大,叶绿素a沿纵断面降低,纤毛虫种类数和丰度也降低。     

2007年10月南海北部浮游纤毛虫的丰度和生物量

报道2007年10月南海北部海域(21°25.47′N 17°24.95′N,109°28.86′E 113°13.01′E)纤毛虫丰度和生物量的水平分布及砂壳纤毛虫的种丰富度。包括了13个断面的82个站位,Rosette采水器采水,水深低于15 m的站位采0,5 m和10 m;小于30 m站位,采0,10 m和底层;大于30 m的站位,采0,10,30 m和底层。纤毛虫丰度为0 5757 ind./L,平均(848±776)ind./L。无壳纤毛虫占绝对优势,其丰度占纤毛虫总丰度的比例平均为(91.9±9)%;纤毛虫生物量为0 12.09μg C/L,平均是(1.2±1.54)μg C/L,无壳纤毛虫的生物量平均为(0.94±1.27)μg C/L,占纤毛虫总生物量的78.6%。共发现砂壳纤毛虫16个属,49种,拟铃虫最多,具有一定的季节性。纤毛虫水体(40 m到表层)丰度为6.4×1069.1×107ind./m2,平均是(3.6×106±1.4×106)ind./m2;水体生物量3.6 195.8 mg C/m2,平均(48.1±33.7)mg C/m2。纤毛虫多分布于近岸浅水区(高温低盐,高Chl a),最大丰度要高于我国其他海区,不是Chl a最高的地方纤毛虫的丰度也最大,纤毛虫丰度最大时Chl a偏低。     

南海南部陆坡表层沉积物细菌和古菌多样性

从南海南部陆坡表层沉积物中扩增了细菌和古菌16S rDNA序列,并对克隆子文库进行系统发育分析.细菌序列以变形杆菌(Proteobacteria)居多,其次是浮霉菌(Planctomycete)、酸杆菌(Acidobacteria)和candidate division OP10,另外还有少量铁还原杆菌(Deferrobacteres)、candidate division OP3、OP11、OP8、TM6、疣微菌(Verrucomicrobia)和螺旋体(Spirochaetes).古菌序列分别来自泉古生菌(Crenarchaeota)和广古生菌(Euryarchaeota),以Marine Benthic Group B(MBGB)、MarineCrenarchaeotic Group Ⅰ(MGⅠ)、Marine Benthic Group D(MBGD)和South African Gold Mine Euryarchaeotic Group(SAGMEG)为主.少量序列为C3、甲烷杆菌(Methanobacteriales)和Novel Euryarchaeotic Group(NEG).结果表明海底表层沉积物中有丰富多样的微生物群落.