Benthic bacterial biomass supported by streamwater dissolved organic matter

Bacterial biomass in surface sediments of a headwater stream was measured as a function of dissolved organic carbon (DOC) flux and temperature. Bacterial biomass was estimated using epifluorescence microscopic counts (EMC) and ATP determinations during exposure to streamwater containing 1,788g DOC/liter and after transfer to groundwater containing 693g DOC/liter. Numbers of bacteria and ATP concentrations averaged 1.36×10⁹ cells and 1,064 ng per gram dry sediment, respectively, under initial DOC exposure. After transfer to low DOC water, biomass estimates dropped by 53 and 55% from EMC and ATP, respectively. The decline to a new steady state occurred within 4 days from ATP assays and within 11 days from EMC measures. A 4°C difference during these exposures had little effect on generation times. The experiment indicated that 27.59 mg/hour of natural DOC supported a steady state bacterial biomass of approximately 10g C/g dry weight of sediment (from EMC determinations). Steady state bacterial biomass estimates on sediments that were previously muffled to remove organic matter were approximately 20-fold lower. The ratio of GTPATP indicated differences in physiological condition or community composition between natural and muffled sediments.     

Limitation of bacterial growth by dissolved organic matter and iron in the Southern ocean

The importance of resource limitation in controlling bacterial growth in the high-nutrient, low-chlorophyll (HNLC) region of the Southern Ocean was experimentally determined during February and March 1998. Organic- and inorganic-nutrient enrichment experiments were performed between 42 degrees S and 55 degrees S along 141 degrees E. Bacterial abundance, mean cell volume, and [(3)H]thymidine and [(3)H]leucine incorporation were measured during 4- to 5-day incubations. Bacterial biomass, production, and rates of growth all responded to organic enrichments in three of the four experiments. These results indicate that bacterial growth was constrained primarily by the availability of dissolved organic matter. Bacterial growth in the subtropical front, subantarctic zone, and subantarctic front responded most favorably to additions of dissolved free amino acids or glucose plus ammonium. Bacterial growth in these regions may be limited by input of both organic matter and reduced nitrogen. Unlike similar experimental results in other HNLC regions (subarctic and equatorial Pacific), growth stimulation of bacteria in the Southern Ocean resulted in significant biomass accumulation, apparently by stimulating bacterial growth in excess of removal processes. Bacterial growth was relatively unchanged by additions of iron alone; however, additions of glucose plus iron resulted in substantial increases in rates of bacterial growth and biomass accumulation. These results imply that bacterial growth efficiency and nitrogen utilization may be partly constrained by iron availability in the HNLC Southern Ocean.     

Urban infrastructure influences dissolved organic matter quality and bacterial metabolism in an urban stream network

相似文献   

陆地生态系统中水溶性有机物动态及其环境学意义

水溶性有机物(DOM)是陆地生态系统中最活跃的有机碳库,也是土壤圈层与相关圈层进行物质与能量交换的重要表现形式,它对重金属、养分元素和有机污染物的活化、迁移与生态毒性有较大影响,在农业土壤溶液中DOM浓度通常在10～80mgC·L^-1,湿地土壤中多数在25～50mgC·L^-1,与森林土壤剖面淋滤水中的DOM相近,但在某些微域土壤环境(如根际和有机肥施用点附近)中DOM浓度可高达200～1000mgC·L^-1,不同来源的DOM在土壤中的迁移性与降解性明显不同,含低分子量组分或亲水性组分较多的DOM不易被土壤吸持而易被微生物降解,pH值相对较高的土壤(如石灰性土壤)对DOM吸附较弱,但pH较低和含有大量氧化物的土壤(如红壤、赤红壤和砖红壤等)则对DOM的吸附较强,施用石灰、土壤淹水或干湿交替、温度升高等有利于土壤保持较高的DOM浓度,由于DOM-金属配合物的形成,DOM能明显促进土壤重金属活化和向下迁移,而且DOM中低分子量或亲水性组分所占比例越低活化作用越强,同样地,由于DOM具有两亲性质,也能明显提高疏水性有机污染物(如农药和持久难降解有机污染物)的水溶性,增加其对环境污染的风险,特别是含疏水性组分越多的DOM这种作用越强．可以认为,继续加强有关DOM在陆地生态系统中产生与消长规律,特别是DOM及其与污染物的配合物从陆地生态系统向水体迁移的机理及其通量的研究,对合理预测污染物的环境行为和科学地进行环境风险评估有重要意义。     

Iron and fluorescent dissolved organic matter in an estuarine and coastal system in Japan

Terrestrially derived dissolved organic matter (DOM) plays an important role in providing ligands that regulate iron transport to coastal ecosystems. Fluorescent DOM (FDOM) is widely used to evaluate DOM behavior, but the relationship between iron and FDOM distributions in estuarine and coastal systems is poorly understood. In this study, we investigated the distributions of dissolved iron (DFe < 0.7-µm fraction) and FDOM as measured using fluorescence excitation-emission matrices in the Yura River–Tango Bay system. The DFe distribution was not closely correlated with that of the humic-like FDOM, indicating that humic-like FDOM is not the main regulator of the DFe concentration in this system. The relatively low fluorescence intensity of humic-like FDOM demonstrates that colloidal inorganic iron is the major component of riverine DFe. A large proportion of the riverine DFe (> 94%) was removed in the mixing process, but humic-like FDOM likely supports the transport of DFe to the coastal zone.     

Importance of dissolved organic matter produced by duckweed (Lemna minor) in a southern English river

SUMMARY. 1. The quantity of dissolved organic carbon (DOC) released by axenic Lemna minor cultures in the laboratory has been determined by an absolute method and by ¹⁴C labelling.
2. Good agreement was obtained between the two methods and from 1.1% to 2.6% of the total carbon fixed was released.
3. The DOC produced by L. minor has been analysed by ultrafiltra- tion and compared with a similar analysis of DOC in natural river water.
4. The results of ullrafiltration analyses indicate that the proportion of low molecular weight (<1000 Daltons) material in DOM produced by axenic L. minor is significantly greater than is found in its natural habitat.     

喀斯特湖泊-河流系统溶解性有机质光谱特征

为探索喀斯特湖泊-河流系统溶解性有机质(DOM)光谱特征空间格局,该研究以我国贵州红枫湖、百花湖和老马河为对象,分析了表层水体DOM紫外参数(SUVA₂₅₄、SUVA₂₈₀、S_275-295、S_350-400、S_R和E2/E3),利用三维荧光-平行因子(EEM-PARAFAC)解析DOM主要成分,同时基于荧光参数(HIX、FI、BIX和β：α)揭示其来源信息。该研究运用Spearman相关性分析及主成分分析(PCA)方法,揭示DOM参数的内在联系及重要组分贡献。结果显示,红枫湖、百花湖和老马河SUVA₂₅₄和SUVA₂₈₀值较低,而E2/E3、S_275-295和S_350-400值较高,说明芳香类成分占比较少且DOM整体分子量较小。水体DOM主要成分为:红枫湖/百花湖(C1:微生物代谢类腐殖质;C2:可见光范围腐殖质;C3:色氨酸),老马河(C1:色氨酸;C2:富里酸;C3:陆源类腐殖质)。水体BIX范围在0.77-1.12之间,说明生物源和陆源输入共同贡献DOM。红枫湖与百花湖FI值小于1.4,而老马河在1.4-1.9间,说明河流内源DOM贡献率高于湖泊。水体β：α值范围在0.73-1.10之间,说明新生DOM具有显著贡献。湖泊与河流HIX值低于4,表明水体腐殖化程度低。老马河HIX与S_R和S_275-295呈正相关(P ＜ 0.05)且与FI呈负相关(P ＜ 0.05),说明DOM腐殖化程度与分子大小和来源密切联系。芳香类DOM的同质性导致SUVA₂₅₄和SUVA₂₈₀相互耦合。研究发现新生DOM多具有生物降解性,表现为BIX和β：α强相关。相对于激流系统,湖泊具有更多的水力停留时间,这可能进一步促进内源微生物的代谢,导致生物驱动的有机质快速循环,因此不同DOM生物讯号相互耦合。研究阐明了喀斯特湖泊-河流系统DOM成分与来源特征,有望为研究全球碳循环过程提供数据支撑。     

Spatial variation in bacterial community and dissolved organic matter composition in groundwater near a eutrophic lake

Aquatic Ecology - The aim of this study was to reveal the variation in dissolved organic matter (DOM) components, bacterial community composition, and their co-relationships during groundwater...     

Distribution and characterization of dissolved and particulate organic matter in Antarctic pack ice

Distribution and composition of organic matter were investigated in Antarctic pack ice in early spring and summer. Accumulation of organic compounds was observed with dissolved organic carbon (DOC) and particulate organic carbon (POC) reaching 717 and 470 μM C, respectively and transparent exopolymeric particles (TEP) up to 3,071 μg Xanthan gum equivalent l⁻¹. POC and TEP seemed to be influenced mainly by algae. Particulate saccharides accounted for 0.2–24.1% (mean, 7.8%) of POC. Dissolved total saccharides represented 0.4–29.6% (mean, 9.7%) of DOC, while dissolved free amino acids (DFAA) accounted for only 1% of DOC. Concentrations of TEP were positively correlated with those of saccharides. Monosaccharides (d-MCHO) dominated during winter–early spring, whereas dissolved polysaccharides did in spring–summer. DFAA were strongly correlated with d-MCHO, suggesting a similar pathway of production. The accumulation of monomers in winter is thought to result from limitation of bacterial activities rather than from the nature of the substrates.     

Pentachlorophenol degradation: a pure bacterial culture and an epilithic microbial consortium

The steady-state growth of a Flavobacterium strain known to utilize pentachlorophenol (PCP) was examined when cellobiose and PCP simultaneously limited its growth rate in continuous culture. A concentration of 600 mg of PCP per liter in influent medium could be continuously degraded without affecting steady-state growth. We measured specific rates of PCP carbon degradation as high as 0.15 +/- 0.01 g (dry weight) of C per h at a growth rate of 0.045 h-1. Comparable specific rates of PCP degradation were obtained and maintained by PCP-adapted, natural consortia of epilithic microorganisms. The consortium results suggest that a fixed-film bioreactor containing a PCP-adapted natural microbial population could be used to treat PCP-contaminated water.     

Regulation of bacterial proteolytic activity at natural concentrations in dissolved organic matter in a maritime pond]

The regulation of the bacterial exoproteolytic activity, at natural substrate concentrations, was studied during the survey of an Atlantic coastal marine pond (France). The regulation of this activity occurs at two different levels: on the one hand, at the cellular level, the ectoenzyme synthesis is regulated by hydrolysis substrates, dissolved combined amino acids (DCAA), and end products, dissolved free amino acids (DFAA), in terms of the relative amounts available to the cell, and on the other hand, at the ecosystem level, i.e. the hydrolytic activity, by the total amounts of DCAA and DFAA in situ. The DFAA acts as an inhibitor in enzymatic synthesis; in contrast, dissolved proteins induce the enzymatic synthesis and the exoproteolytic activity. These results, obtained in natural concentration conditions, confirm the functioning in situ of the ectoenzymatic activity regulation model of Chróst, until now only validated in an enriched experimental medium.     

Microbial decomposition of dissolved organic matter in a hypertrophic pond

Planktonic heterotrophic bacteria in lakes utilize the labile fraction of dissolved organic carbon (DOC), although information about seasonal changes in labile DOC in hypertrophic lakes in terms of absolute amount and relative proportion of the total DOC is still limited. We conducted DOC decomposition experiments using GF/F filtrates in water samples from hypertrophic Furuike Pond, together with monitoring of DOC concentration and bacterial abundance in water samples from the pond, to examine seasonal changes in the amount of labile DOC and growth of bacteria on labile DOC. DOC concentrations fluctuated between 2.7 and 11 mg C l⁻¹, and bacterial abundance fluctuated between 1.5 × 10⁶ and 1.0 × 10⁸ cells ml⁻¹. In the DOC decomposition experiment when grazers of bacteria were removed, small portions of DOC (18% ± 12%) were labile for decomposition by bacteria, and the growth yield of bacteria on labile DOC ranged between 3.3% and 19%. Furthermore, addition of nitrogen to water samples enhanced bacterial growth. Thus, not only labile DOC but also nitrogen limited bacterial growth in the pond. Considering the results in the present study together with those of previous studies, bacterial abundance in Furuike Pond is subjected to bottom-up control, such as by limitation of DOC and nitrogen throughout the year, although top-down control of bacterial abundance such as by grazing is seasonally important. Received: May 1, 2001 / Accepted: July 22, 2001     

Biodegradation of methyl tert-butyl ether by a bacterial pure culture.

A bacterial strain, PM1, which is able to utilize methyl tert-butyl ether (MTBE) as its sole carbon and energy source, was isolated from a mixed microbial consortium in a compost biofilter capable of degrading MTBE. Initial linear rates of MTBE degradation by 2 x 10(6) cells ml(-1) were 0.07, 1.17, and 3.56 microg ml(-1) h(-1) for initial concentrations of 5, 50, and 500 microg MTBE ml(-1), respectively. When incubated with 20 microg of uniformly labeled [(14)C]MTBE ml(-1), strain PM1 converted 46% to (14)CO(2) and 19% to (14)C-labeled cells within 120 h. This yield is consistent with the measurement of protein accumulation at different MTBE concentrations from which was estimated a biomass yield of 0.18 mg of cells mg MTBE(-1). Strain PM1 was inoculated into sediment core material collected from a contaminated groundwater plume at Port Hueneme, California, in which there was no evidence of MTBE degradation. Strain PM1 readily degraded 20 microg of MTBE ml(-1) added to the core material. The rate of MTBE removal increased with additional inputs of 20 microg of MTBE ml(-1). These results suggest that PM1 has potential for use in the remediation of MTBE-contaminated environments.     

Biodegradation of methyl tert-butyl ether by a pure bacterial culture.

Biodegradation of methyl tert-butyl ether (MTBE) by the hydrogen-oxidizing bacterium Hydrogenophaga flava ENV735 was evaluated. ENV735 grew slowly on MTBE or tert-butyl alcohol (TBA) as sole sources of carbon and energy, but growth on these substrates was greatly enhanced by the addition of a small amount of yeast extract. The addition of H(2) did not enhance or diminish MTBE degradation by the strain, and MTBE was only poorly degraded or not degraded by type strains of Hydrogenophaga or hydrogen-oxidizing enrichment cultures, respectively. MTBE degradation activity was constitutively expressed in ENV735 and was not greatly affected by formaldehyde, carbon monoxide, allyl thiourea, or acetylene. MTBE degradation was inhibited by 1-amino benzotriazole and butadiene monoepoxide. TBA degradation was inducible by TBA and was inhibited by formaldehyde at concentrations of >0.24 mM and by acetylene but not by the other inhibitors tested. These results demonstrate that separate, independently regulated genes encode MTBE and TBA metabolism in ENV735.     

Interactive effects of solar radiation and dissolved organic matter on bacterial activity and community structure

We studied the interactive effects of dissolved organic matter (DOM) and solar radiation on the activity and community structure of bacteria from an alpine lake. Activity was assessed both at the community level as leucine incorporation rates and at the single-cell level by microautoradiography. Fluorescent in situ hybridization and signal amplification by catalysed reporter deposition (CARD-FISH) was used to track changes in the bacterial community composition. Bacteria-free filtrates of different DOM sources (lake, algae or soil) were incubated either in the dark or exposed to solar radiation. Afterwards, the natural bacterial assemblage was inoculated and the cultures incubated in the dark for 24-48 h. Bacterial activity was enhanced in the first 24 h in the soil and algal DOM amendments kept in the dark. After 48 h, the enhancement effect was greatly reduced. The initial bacterial community was dominated by Betaproteobacteria followed by Actinobacteria. The relative abundance (expressed as a percentage of DAPI-stained cells) of Betaproteobacteria increased first in dark incubated DOM amendments, but after 48 h no significant differences were detected among treatments. In contrast, the relative abundance of Actinobacteria increased in pre-irradiated DOM treatments. Although Betaproteobacteria dominated at the end of the experiment, the relative abundance of their R-BT subgroup differed among treatments. Changes in bacterial community activity were significantly correlated with those of the relative abundance and activity of Betaproteobacteria, whereas the contribution of Actinobacteria to the bulk activity was very modest. Our results indicate a negative effect of DOM photoalteration on the bulk bacterial activity. The magnitude of this effect was time-dependent and related to rapid changes in the bacterial assemblage composition.     

Pentachlorophenol degradation: a pure bacterial culture and an epilithic microbial consortium.

The steady-state growth of a Flavobacterium strain known to utilize pentachlorophenol (PCP) was examined when cellobiose and PCP simultaneously limited its growth rate in continuous culture. A concentration of 600 mg of PCP per liter in influent medium could be continuously degraded without affecting steady-state growth. We measured specific rates of PCP carbon degradation as high as 0.15 +/- 0.01 g (dry weight) of C per h at a growth rate of 0.045 h-1. Comparable specific rates of PCP degradation were obtained and maintained by PCP-adapted, natural consortia of epilithic microorganisms. The consortium results suggest that a fixed-film bioreactor containing a PCP-adapted natural microbial population could be used to treat PCP-contaminated water.     

Influence of cladoceran grazing activity on dissolved organic matter, enzymatic hydrolysis and bacterial growth

To assess the influence of grazing by cladocerans on dissolvedorganic matter (DOM), glycolytic and proteolytic activitiesand bacterial growth were measured by in situ incubation oflake water from the epilimnion of an oligotrophic reservoirin three different treatments: in absence of zooplankton, andin presence of zooplankton (natural abundance and concentratedfour-fold). These experiments were conducted at two periodsin the succession of plankton populations (May and June 1998),that differed in the quality of the prey ingested (Eudorinasp. compared to Cryptomonas sp. and Rhodomonas sp.) and theirgrazing intensity (31.8 ± 2.2 µg C l^–1 day^–1compared to 10.2 ± 0.5 µg C l^–1 day^–1).A systematic increase in bacterial biomass was measured in thetreatments containing the highest zooplankton concentrations.The DOM concentrations produced in situ showed few significantdifferences between the three treatments, but the assimilationof DOM was higher in the presence of zooplankton than in theirabsence. These results show that the influence of cladoceranson the DOM was more of a qualitative than a quantitative nature.The protein compounds derived from the grazing activities ofmetazoans seem to be a major nutrient source for growth forbacteria (r = 0.81, P <0.05). In this study, the highesthydrolytic activities were recorded in the presence of highconcentrations of metazoan zooplankton. However, the processesthat regulated these activities differed between the two experimentaldates (repression compared to enzyme stimulation). Grazing activitiescould lead to an increase in phytoplanktonic excretion duringthe growth phase, and therefore the production of low molecularweight compounds that are easily assimilated by the bacterialplankton.