甘蔗细茎野生种云南不同生态类型的RAPD分析

利用25个随机引物对来自云南不同生态类型的82份甘蔗细茎野生种（Saccharnm spontanenm L．）和4份国外种材料进行RAPD标记,结果表明：云南甘蔗细茎野生种不同生态类型的遗传变异较大,具有丰富的遗传多样性,低续度类型的遗传多样性明显高于高纬度类型,在相同的纬度范围内,随着海拔的升高,其多态性逐渐减少,基于分子聚类分析,86份材料被划分为8个不同群体,表现出明显的地理分布的特点,结果初步证明了云南甘蔗细茎野生种可能起源于云南南部低海拔,低纬度地区,而后逐渐向高海拔,高纬度的西北和东北部演化,扩散,提出了云南南部可能是野生甘蔗起源中心之一的观点。     

间种蔬菜对甘蔗地生态环境和甘蔗生长的影响

甘蔗 (ＳａｃｃｈａｒｕｍｏｆｆｉｃｉｎａｒｕｍＬ .)是广西重要的经济作物 ,种植面积达 4 5 33× 10 6ｈａ[1] ,甘蔗的前期生长比较缓慢 ,行间有比较大的可利用空间 ,到6月下旬～ 7月上旬才进入迅速生长期并逐渐封行。有研究表明 ,在甘蔗园间种玉米对甘蔗的生长发育和产量有一定的影响[5] ,而合理间种豆科作物 (黄豆和花生 )不仅不影响甘蔗的正常生长发育 ,还可以增加甘蔗的产量[4 ,6] 。但间种作物对甘蔗园生态环境的影响未见报道 ,我们于 1997- 1999年在桂西北开展了甘蔗园间种经济效益比较高的蔬菜作物的试验 ,并对间种甘蔗园生态环…     

不同基因型割手密无性系的核型分析

为探讨不同基因型割手密无性系间的亲缘关系,采用酶解去壁低渗法对不同基因型的割手密材料进行核型分析。10份供试材料的绝大多数染色体为中部着丝点(m)染色体,少数为近中部着丝点(sm)染色体及正中部着丝点(M)染色体,部分材料中还具有端部着丝点(T)染色体及近端部着丝点区染色体(t);依据分析结果总结了参试材料的核型公式;参试材料中有2份为1B核型、7份为2B核型、1份为2C核型。参试材料间的核型均存在差异且不对称。     

11份割手密遗传多样性的SSR分析

利用10对多态性丰富的SSR引物,以国家甘蔗种质资源圃中保存的14份具有代表性的割手密为对照,对未收集过的云南地区11份割手密（Saccharum spontaneum L.）野生资源进行多样性分析。结果共扩增出233条DNA谱带,与对照相比,新采集材料的多态性条带为207条,其中14条为特有条带,多态性条带比率为0.89。遗传相似性系数和UPGMA聚类分析表明,新采集的材料并没有单独聚为一类,而是比较分散,在相似性系数为0.64处做切割线,参试材料可分为三个类群：第一类群主要由龙门割手密、河边村割手密和福建仙游1号组成;第二类群中包含19份材料,其中新采集的样品有上岗割手密、他拉割手密、安乐割手密、勐根割手密、芒美割手密、贺海割手密、回落割手密、里拉割手密和曼亨割手密,对照材料主要包含了云南、四川、越南、老挝、泰国地区的割手密,其共同特点是均分布在内陆地区;第三类群包括3个材料,分别是海南1号、海南92-2和广东化州割手密,其中不包含新采集的材料。而在相似性系数为0.654处作切割线又能将上述第二类群分为较细的三个亚群。由此可见,新采集的11份割手密资源具有丰富的遗传多样性,与已收集的资源相比,具有一定的差异性。说明依靠云南高山峡谷等立体气候特点,分布着遗传差异显著的割手密无性系。     

甘蔗不同部位的固氮酶活性检测

比较巴西2个固氮甘蔗品种‘B1’、‘B8’的叶片、主脉、叶鞘、茎、根和根际周围固氮酶活性的结果表明:茎、根、根际周围的固氮酶活性较高。     

Variations in random amplified polymorphic DNA profile and toxin production among isolates of Colletotrichum falcatum Went from sugarcane in Tamil Nadu,India

Red rot, caused by Colletotrichum falcatum Went, is one of the most important diseases of sugarcane (Saccharum officinarum L.). The pathogen shows a great diversity in virulence as a number of pathotypes are known to occur in nature. In the present study, the toxin producing ability and genetic variability among isolates of C. falcatum collected from major sugarcane growing areas of Tamil Nadu, India were analysed. The C. falcatum isolates differed significantly in their ability to produce toxin in vitro. The toxin from C. falcatum isolate Cf 671a induced the maximum electrolyte leakage (300 μS) from sugarcane leaf tissues. The genetic relatedness of the isolates of C. falcatum differing in toxin production potential was investigated by using RAPD analysis. Analysis of the genetic coefficient matrix derived from the scores of RAPD profiles showed that minimum and maximum percent similarities among the tested C. falcatum isolates were in the range of 19 to 95% respectively. The phylogenetic analysis by the UPGMA identified two main clusters. Cluster A contains only one isolate (Cf 98061) and all the other isolates were placed in Cluster B confirming high genetic diversity among the isolates. No correlation was observed between clustering of the C. falcatum isolates in the dendrogram and their toxin producing abilities.     

Detection of Colletotrichum falcatum causing red rot of sugarcane by enzyme-linked immunosorbent assay

Red rot disease of sugarcane caused by Colletotrichum falcatum Went is one of the most destructive diseases of sugarcane (Saccharum officinarum L.) worldwide. The pathogen spreads primarily through infected sugarcane setts and hence the use of disease-free setts is essential to prevent the disease. In order to develop immunological method for detection of C. falcatum, two proteins with molecular weights of 27 kDa and 45 kDa were purified from the mycelium of C. falcatum race Cf 05 and used as antigen source to raise polyclonal antibodies in NewZealand white rabbit. The developed polyclonal antibodies were tested for detection of C. falcatum by enzyme-linked immunosorbent assay (ELISA) and immunoblot analysis. The polyclonal antibodies specifically detected C. falcatum in extracts from infected plants, both in immunoblot and ELISA. The ELISA results showed that the developed polyclonal antibodies were highly specific to C.falcatum. The developed antibodies were very sensitive and could detect C.falcatum proteins even at a dilution of 1:50,000. Higher ELISA absorbance values were recorded even at an antigen dilution of 1:500. In western blot analysis, protein bands with molecular weights of 27 kDa and 45 kDa reacting to antisera raised against 27 kDa and 45 kDa mycelial proteins of C. falcatum, respectively, were detected in protein samples from red rot infected canes. The high specific reactivity and sensitivity of the antisera indicate its potential suitability for ELISA-based detection of C. falcatum.     

The Response of Sugarcane (Saccharum officinarum) Cultured Cells to Anoxia and the Selection of a Tolerant Cell Line

The effect of anoxia on the sugarcane (Saccharum officinarum L.) cultured cells was studied in order to elaborate a technique for in vitro selection of cell lines, which would be tolerant to anaerobic stress. Inhibitory and lethal doses of anaerobic incubation were established from the state of the mitochondrial ultrastructure during the anaerobic incubation of cells either with or without exogenous glucose, as well as from the pattern of the post-anaerobic callus growth. An intact state of the mitochondrial ultrastructure and the viability of some cells in the presence of 3% glucose were shown to be maintained for at least 14 days of anaerobic incubation, while the index of post-anaerobic growth decreased by almost 50% even after 72-hour-long anaerobiosis. In the absence of exogenous glucose, a marked destruction of mitochondria and a twofold decrease in the callus growth index were observed as early as after six-hour-long anaerobic stress. A 48-hour-long incubation under these conditions resulted in the maintenance of the intact ultrastructure only in 7–10% of cells, while a 96-hour-long anaerobiosis brought about the complete degradation of the subcellular structure and cell death. A 48-hour-long anaerobiosis without exogenous glucose was chosen for selecting the anoxia-tolerant cell lines. After three cycles of selection, the anoxia tolerance of the selected cell line exceeded the respective index of the initial callus several-fold. In selected line, about 50% of cells retained viability and could resume growth even after 96-hour-long anaerobic incubation. The experimental results obtained were used to determine the possible causes of the heterogeneity of callus cells as regards their anoxia resistance.     

云南甘蔗细茎野生种82-114测交后代主要性状遗传分析

利用云南甘蔗细茎野生种82-114(简称:云割82-114)为父本,与甘蔗栽培原种、生产品种和含野生血缘F1等3类亲本进行测交.对后代锤度、茎径、株高、有效茎、蔗产量等5个主要数量性状进行方差、遗传力和配合力分析,结果表明:①组合后代锤度、茎径、株高、有效茎4个性状差异极显著;②组合后代锤度、茎径、株高、有效茎的遗传力表现较突出,均超89.0%;③3类组合中,栽培原种×云割82.114后代有效茎配合力表现明显的正效应,生产品种×云割82-114后代锤度、茎径、株高、蔗产量配合力有比较明显的正效应,舍野生血缘F1×云割82-114后代锤度、茎径、株高、有效茎、蔗产量等5个指标的配合力效应取向不明显.     

割手密茎尖细胞有丝分裂过程中微管骨架的变化

利用冰冻切片法结合间接免疫荧光标记技术对割手密茎尖细胞有丝分裂过程中微管骨架的变化进行了研究。结果表明:在割手密茎尖细胞有丝分裂过程中存在4种循序变化的典型微管列阵,即周质微管、早前期微管带、纺锤体微管及成膜体微管。在割手密初生增粗分生组织细胞中观察到的大多数是周质微管列阵,很少观察到其它3种典型的微管列阵,这可能这是割手密茎较小的原因之一。     

云南割手密血缘F1代创新种质的因子和聚类分析

本试验对70份云南割手密血缘F1代创新种质材料8个工农艺性状进行了因子和聚类分析。因子分析中8个公因子保留前3个公因子,其累计贡献率达79.35%。第1公因子中载荷值较大的是单产、含糖量、公顷有效茎数、出苗率和分蘖率等性状;第2公因子中起主导作用的性状是茎径和株高两个产量因子;第3公因子只有11月理论蔗糖分起主导作用。以70份创新材料3个公因子的因子得分为指标,采用系统聚类中的最长距离法进行系统聚类分析。在遗传距离2.4处,参试材料被聚为十类,其中占参试材料总数的38.6%的第Ⅰ、Ⅳ、Ⅶ、Ⅷ、Ⅹ五类材料,表现高产;占参试材料82.8%的第Ⅰ、Ⅱ、Ⅳ、Ⅴ、Ⅵ、Ⅶ、Ⅸ七类材料,表现高糖,特别是其中占参试材料52.8%的Ⅰ、Ⅳ、Ⅴ、Ⅵ四类材料,11月理论蔗糖分均高于12%;占参试材料总数30%的第I、Ⅳ、Ⅶ三类材料,表现高产、高糖。这个分类结果为有针对性的利用这些创新种质材料培育高产、高糖创新亲本提供了科学依据。     

甘蔗过氧化氢酶基因的电子克隆及生物信息学分析

应用电子克隆技术,获得甘蔗中一个过氧化氢酶基因的cDNA序列全长,命名为S-CAT。该基因全长2160bp,包含一个1479bp的开放阅读框,编码492个氨基酸。通过PSORT工具,预测甘蔗S-CAT蛋白存在于过氧化物酶体中。同源比对分析显示,S-CAT基因编码的氨基酸序列与水稻、玉米、高粱、朝鲜碱茅、葡萄等植物中过氧化氢酶基因所编码的氨基酸序列高度同源,同源性分别为97%,97%,95%,91%和92%。研究结果为该基因的实验克隆奠定基础。     

甘蔗雌雄蕊的解剖学研究

甘蔗雄蕊花药的壁由四层细胞构成,药室内壁在花药成熟时才发育。花粉母细胞减数分裂属连续型,四分体正常发育为小孢子,但当开花时,只有少数进一步发育为成熟的花粉粒。甘蔗雌蕊柱头是分枝的,每一柱头毛是由数个细胞质浓密的细胞,呈不规则的纵列而组成。倒生胚珠一个,着生于子房室的内侧;内、外珠被均由两层细胞构成,外珠被上侧未能生长到珠孔,内珠被的内层细胞在胚珠发育中不断增大体积。石蜡制片是以樟油为透明剂的。     

甘蔗几丁质酶基因的电子克隆与生物信息学分析

用电子克隆方法获得甘蔗几丁质酶基因SCCHI1,采用生物信息学方法,对该基因编码蛋白从氨基酸组成、理化性质、跨膜结构域、疏水性/亲水性、亚细胞定位、高级结构及功能域等方面进行了预测和分析。结果表明:SCCHI1基因全长1236bp,包含一个完整的990bp的ORF,编码329个氨基酸。SCCHI1基因属于糖苷水解酶19家族,含有N-端信号肽、交连区、催化区,与高粱等其它植物的几丁质酶基因具有高度的相似性。为SCCHI1基因的分子克隆、功能鉴定和应用提供参考。     

广西两种能源植物种植对土壤动物多样性的影响

在广西武鸣地区以木薯(Manihot esculenta)平地为参照,于2012年7月从能源植物种类筛选(甘蔗(Saccharum officinarum)与木薯)、种植模式(套作与单作)和地形选择(坡地与平地)等方面,对主要能源植物甘蔗和木薯种植地进行了土壤动物和土壤环境质量的调查.结果表明:在甘蔗种植地,土壤动物的数量、多样性、生物学质量均出现了显著下降,特别是生物学质量下降幅度达53％(P=0.032);在木薯平地上套种花生(Arachis hypogaea)对土壤动物的数量、群落组成及生物学质量无明显影响,但生物多样性显著上升;地形选择对土壤动物的效果明显,坡地的土壤动物数量、生物多样性及生物学质量均出现普遍下降.这些结果表明,木薯比甘蔗更适合长期种植,且通过优化种植模式,选择适当地形还可以缓冲木薯种植过程对土壤生物多样性和土壤质量的负面影响,因此可初步断定在广西可以优先选择木薯作为一种长期发展的能源植物.     

Impact of taxon sampling on the estimation of rates of evolution at sites

The function of individual sites within a protein influences their rate of accepted point mutation. During the computation of phylogenetic likelihoods, rate heterogeneity can be modeled on a site-per-site basis with relative rates drawn from a discretized Gamma-distribution. Site-rate estimates (e.g., the rate of highest posterior probability given the data at a site) can then be used as a measure of evolutionary constraints imposed by function. However, if the sequence availability is limited, the estimation of rates is subject to sampling error. This article presents a simulation study that evaluates the robustness of evolutionary site-rate estimates for both small and phylogenetically unbalanced samples. The sampling error on rate estimates was first evaluated for alignments that included 5-45 sequences, sampled by jackknifing, from a master alignment containing 968 sequences. We observed that the potentially enhanced resolution among site rates due to the inclusion of a larger number of rate categories is negated by the difficulty in correctly estimating intermediate rates. This effect is marked for data sets with less than 30 sequences. Although the computation of likelihood theoretically accounts for phylogenetic distances through branch lengths, the introduction of a single long-branch outlier sequence had a significant negative effect on site-rate estimates. Finally, the presence of a shift in rates of evolution between related lineages can be diagnostic of a gain/loss of function within a protein family. Our analyses indicate that detecting these rate shifts is a harder problem than estimating rates. This is so, partially, because the difference in rates depends on two rate estimates, each with an intrinsic uncertainty. The performances of four methods to detect these site-rate shifts are evaluated and compared. Guidelines are suggested for preparing data sets minimally influenced by error introduced by sequence sampling.