Delineating geographic boundaries of the woolly mouse opossums, Micoureusdemerarae and Micoureus paraguayanus (Didelphimorphia: Didelphidae)

This paper reports on molecular classification of the woolly mouse opossum, Micoureus spp., in the southeastern Atlantic Forest in Brazil, a hotspot of critically threatened biodiversity. Phylogenetic analysis and character-based diagnosis were done using DNA sequences from the mitochondrial cytochrome b gene and cytochrome c oxidase subunit I genes, and exon 6 of the nuclear dentine matrix protein 1 gene (DMP1). Although the nuclear DMP1 gene showed insufficient genetic variation for species diagnosis, the mtDNA analyses resulted in the robust grouping of samples of the M. paraguayanus/M. demerarae complex into three clades with distinct DNA sequence diagnostics for the species units in this study. The results support the species status of M. paraguayanus (Tate in Am Mus Novit 493: 1–13, 1931), which has a geographic distribution in the Atlantic Forest from the North and Northeast of Minas Gerais state in Brazil, going south along the coastal region of Brazil, to Paraguay and Argentina. Evidence of the boundary for this species and the provided diagnostics should facilitate and improve accuracy of studies that have been done in critical threatened fragments of the Atlantic Forest, especially in Minas Gerais and Bahia states, Brazil.     

Molecular phylogeny of the New World gecko genus Homonota (Squamata: Phyllodactylidae)

The genus Homonota was described by Gray (1845) and currently includes 10 species: Homonota andicola, H. borellii, H. darwinii, H. fasciata, H. rupicola, H. taragui, H. underwoodi, H. uruguayensis, H. williamsii & H. whitii and one subspecies of H. darwinii (H. darwinii macrocephala). It is distributed from 15° latitude south in southern Brazil, through much of Bolivia, Paraguay, Uruguay and Argentina to 54° south in Patagonia and across multiple different habitats. Several morphological taxonomic studies on a subset of these species have been published, but no molecular phylogenetic hypotheses are available for the genus. The objective of this study is to present a molecular phylogenetic hypothesis for all the described species in the genus. We sequenced two mitochondrial genes (cyt‐b & 12S: 1745 bp), seven nuclear protein coding (RBMX, DMLX, NKTR, PLRL, SINCAIP, MXRA5, ACA4: 5804 bp) and two anonymous nuclear loci (30Hb, 19Hb: 1306 bp) and implemented traditional concatenated analyses (MP, ML, BI) as well as species‐tree (*beast ) approaches. All methods recovered almost the same topology. We recovered the genus Homonota as monophyletic with strong statistical support. Within Homonota, there are three strongly supported clades (whitii, borellii and fasciata), which differ from those previously proposed based on scale shape, osteology, myology and quantitative characters. Detailed morphological analyses based on this highly resolved and well‐supported phylogeny will provide a framework for understanding morphological evolution and historical biogeography of this phenotypically conservative genus. We hypothesize that extensive marine transgressions during Middle and Late Miocene most probably isolated the ancestors of the three main clades in eastern Uruguay (borellii group), north‐western Argentina‐southern Bolivia (fasciata group), and central‐western Argentina (whitii group). Phylogeographic and morphological/morphometric analyses coupled with paleo‐niche modelling are needed to better understand its biogeographical history.     

<Emphasis Type="Italic">Kerianthera longiflora</Emphasis> (Rubiaceae), a remarkable new species from eastern Brazil,with some observations on <Emphasis Type="Italic">K. preclara</Emphasis>

A new species of Kerianthera, K. longiflora Zappi & C. T. Oliveira (Rubiaceae), has been discovered in relicts of Atlantic Forest in Minas Gerais and Espírito Santo, Brazil. This genus was, until now, thought to be monotypic and to occur only in the Amazon. The morphology, phenology and habitat of the new species are discussed and the IUCN conservation status of this and K. preclara are provided.     

Molecular and Morphological Evidence Reveals a New Species in the Phyllomedusa hypochondrialis Group (Hylidae,Phyllomedusinae) from the Atlantic Forest of the Highlands of Southern Brazil

The taxonomic status of a disjunctive population of Phyllomedusa from southern Brazil was diagnosed using molecular, chromosomal, and morphological approaches, which resulted in the recognition of a new species of the P. hypochondrialis group. Here, we describe P. rustica sp. n. from the Atlantic Forest biome, found in natural highland grassland formations on a plateau in the south of Brazil. Phylogenetic inferences placed P. rustica sp. n. in a subclade that includes P. rhodei + all the highland species of the clade. Chromosomal morphology is conservative, supporting the inference of homologies among the karyotypes of the species of this genus. Phyllomedusa rustica is apparently restricted to its type-locality, and we discuss the potential impact on the strategies applied to the conservation of the natural grassland formations found within the Brazilian Atlantic Forest biome in southern Brazil. We suggest that conservation strategies should be modified to guarantee the preservation of this species.     

Hosts,distribution and genetic divergence (16S rDNA) of <Emphasis Type="Italic">Amblyomma dubitatum</Emphasis> (Acari: Ixodidae)

We supply information about hosts and distribution of Amblyomma dubitatum. In addition, we carry out an analysis of genetic divergence among specimens of A. dubitatum from different localities and with respect to other Neotropical Amblyomma species, using sequences of 16S rDNA gene. Although specimens of A. dubitatum were collected on several mammal species as cattle horse, Tapirus terrestris, Mazama gouazoubira, Tayassu pecari, Sus scrofa, Cerdocyon thous, Myocastor coypus, Allouata caraya, Glossophaga soricina and man, most records of immature and adult stages of A. dubitatum were made on Hydrochoerus hydrochaeris, making this rodent the principal host for all parasitic stages of this ticks. Cricetidae rodents (Lundomys molitor, Scapteromys tumidus), opossums (Didelphis albiventris) and vizcacha (Lagostomus maximus) also were recorded as hosts for immature stages. All findings of A. dubitatum correspond to localities of Argentina, Brazil, Paraguay and Uruguay, and they were concentrated in the Biogeographical provinces of Pampa, Chaco, Cerrado, Brazilian Atlantic Forest, Parana Forest and Araucaria angustifolia Forest. The distribution of A. dubitatum is narrower than that of its principal host, therefore environmental variables rather than hosts determine the distributional ranges of this tick. The intraspecific genetic divergence among 16S rDNA sequences of A. dubitatum ticks collected in different localities from Argentina, Brazil and Uruguay was in all cases lower than 0.8%, whereas the differences with the remaining Amblyomma species included in the analysis were always bigger than 6.8%. Thus, the taxonomic status of A. dubitatum along its distribution appears to be certain at the specific level.     

Wild pigs and their widespread threat to biodiversity conservation in South America

Wild pigs, including wild boar (Sus scrofa) and feral domestic pig (Sus scrofa domestica), are associated with negative impacts in their native and introduced ranges. We compiled wild pig occurrence reports and utilized Maximum Entropy modelling to predict their potential distribution in ecoregions overlaying Argentina, Brazil, Bolivia, Chile, Uruguay and Paraguay. An analysis of their observed and potential distributions was carried out in relation to four biodiversity hotspots and 3766 protected areas to estimate the number of units and percent area currently and potentially invaded. Among biodiversity hotspots, Atlantic Forest, Cerrado, and Chilean Winter Rainfall-Valdivian Forests included 44.7% of wild pig records. The proportion of suitable area was 85% in Atlantic Forest, 61.3% in Cerrado, 37.5% in Chilean Winter Rainfall-Valdivian Forests, and 5.6% in Tropical Andes. The number of protected areas with known wild pig presence was led by Uruguay (100%), followed by Chile (20.3%), Argentina (15.8%), Paraguay (9.5%), Bolivia (6.5%), and Brazil (4.7%). The proportion of protected areas with predicted wild pig presence was highest in Uruguay (100%), followed by Paraguay (72.6%), Brazil (58.0%), Argentina (57.4%), Chile (42.2%), and Bolivia (35.9%). Our work represents the first assessment of wild pig potential distribution in South America and highlights the potentially devastating impacts of wild pigs on the regional biodiversity and national conservation targets, especially at mega-diverse areas. We present a dynamic web application that can be readily consulted by scientists, managers and decision makers to improve wild pig control and risk mitigation actions in the study region.     

Revision of the genus Evanos Laporte de Castelnau, 1840, with the description of a second species (Coleoptera: Scarabaeoidea: Rutelidae: Geniatini)

The monotypic genus Evanos (Coleoptera: Rutelidae: Geniatini) is revised and a new species, E. danieleae Grossi, n. sp., is described based on specimens collected from Minas Gerais, Brazil. A lectotype is designated for Evanos villatus. Diagnostic characters and comments about the taxonomic status of the genus are given, as well as a key for both species and a distribution map with the known locality records.     

Species delimitation in sharpnose sharks (genus <Emphasis Type="Italic">Rhizoprionodon</Emphasis>) in the western Atlantic Ocean using mitochondrial DNA

Despite Springer’s (1964) revision of the sharpnose sharks (genus Rhizoprionodon), the taxonomic definition and ranges of Rhizoprionodon in the western Atlantic Ocean remains problematic. In particular, the distinction between Rhizoprionodon terraenovae and R. porosus, and the occurrence of R. terraenovae in South American waters are unresolved issues involving common and ecologically important species in need of fishery management in Caribbean and southwest Atlantic waters. In recent years, molecular markers have been used as efficient tools for the detection of cryptic species and to address controversial taxonomic issues. In this study 415 samples of the genus Rhizoprionodon captured in the western Atlantic Ocean from Florida to southern Brazil were examined for sequences of the COI gene and the D-loop and evaluated for nucleotide differences. The results on nucleotide composition, AMOVA tests, and relationship distances using Bayesian-likelihood method and haplotypes network, corroborates Springer’s (1964) morphometric and meristic finding and provide strong evidence that supports consideration of R. terraenovae and R. porosus as distinct species.     

Conservation and historical distribution of two bumblebee species from the Atlantic Forest

In this study, we analysed the processes resulting in the origin of two endemic sister species of bumblebees in the Brazilian Atlantic Forest. We studied the historical distribution pattern of Bombus bahiensis, which is restricted to small fragments in eastern Brazil and the phylogeographic pattern and historical demography of B. brasiliensis, which is widely distributed in southern and south-eastern Brazil and neighbouring regions of Uruguay, Paraguay, and Argentina. We used ecological niche models, niche analyses, and genetic and distribution data (i) to test the role of niche differentiation on the divergence between the two species, (ii) to find potential distribution areas for the most restricted B. bahiensis, and (iii) to evaluate the conservation status of both species. Our results showed that B. brasiliensis populations are able to disperse across mosaics of anthropogenic and preserved areas and exhibit low levels of spatial genetic structure. Otherwise, B. bahiensis presented a restricted distribution range and likely a lower diversity, where it is suffering with an increasing habitat loss. The climatic oscillations of the Pleistocene influenced the population structure of both species in different ways, probably due to differences in their effective population sizes, physiology and past demographic fluctuations. Specifically, while B. brasiliensis expanded its distribution range in the last 500,?000?years throughout most of the Atlantic Forest, B. bahiensis remained restricted to a small rainforest area between southern Bahia and northern Espírito Santo states in Brazil. In its southern distribution, in the state of Espírito Santo, B. bahiensis is currently very rare or extinct. Currently, the adjacent ranges of Bombus brasiliensis and B. bahiensis do not overlap and our results indicate that these species may have further diversified through a reinforcement process associated to niche specialization and differentiation.     

Taxonomic revision and phylogenetic relationships of the bee genus Parapsaenythia Friese (Hymenoptera,Apidae, Protandrenini), with biogeographic inferences for the South American Chacoan Subregion

The bee genus Parapsaenythia Friese (Apidae, Protandrenini) is restricted to South America and characterized by the strongly punctate integument and hairy eyes. In the present work, the species of Parapsaenythia are revised, with seven species recognized, of which three are described as new: P. carinulata sp.n. (Argentina, Brazil, Paraguay), P. inornata Moure (Brazil), P. lanata sp.n. (Brazil), P. paspali (Schrottky) (Argentina, Brazil, Paraguay), P. puncticutis (Vachal) (Argentina, Bolivia), P. scutellaris sp.n. (Argentina, Bolivia, Brazil, Paraguay) and P. serripes (Ducke) (Argentina, Brazil). Lectotypes are designated for Psaenythia (Parapsaenythia) argentina Friese, Anthrenoides paspali Schrottky and Parapsaenythia paraguayae Brèthes. Floral records, distribution maps, illustrations and an identification key are provided. The cladistic analysis of 11 terminal species (all species of Parapsaenythia plus four outgroup species), based on 45 characters of external morphology and male terminalia, produced a single most parsimonious tree. Parapsaenythia was recovered as monophyletic, with the relationships among its species as follows: (P. inornata (P. carinulata sp.n. (P. lanata sp.n. (P. scutellaris sp.n. (P. serripes, P. paspali, P. puncticutis))))). Based on these relationships plus the available distributional data, a cladistic biogeographic analysis was performed, and area cladograms for the Chacoan subregion are presented and discussed.     

Goeppertia mendesiana sp. nov. (Marantaceae) from Bahia,Brazil, with a key to the species of Goeppertia with ornamented leaves in the Atlantic Forest of Brazil

Goeppertia mendesiana, a new species from the Atlantic Forest of Bahia, Brazil, is described and illustrated. It resembles G. widgrenii (Körn.) Borchs. & Suárez, but differs from that species by its villose petioles and peduncles (vs glabrous in G. widgrenii) and by the absence of bracteoles and interphylls, a rare feature in the genus. The ecology, distribution and conservation status of the new species is presented, along with a key to the species of Goeppertia with ornamented leaves in the Atlantic Forest of Brazil.     

Phylogenomic and morphological data reveal hidden patterns of diversity in the national tree of Brazil,Paubrasilia echinata

Premise

Paubrasilia echinata (common names, pau brasil, brazilwood) is the national tree of Brazil and an endangered species endemic to the Brazilian Atlantic Forest. Over its wide distribution of 2000 km, its leaflets morphology exhibits extensive plasticity. Three morphotypes are commonly identified based on leaf size, but it is unclear if they represent distinct taxa or a single polymorphic species. This study aims to clarify the taxonomic position of the three morphotypes to inform conservation decisions.

Methods

A morphometric study of leaf characters of herbarium specimens was coupled with genetic analyses using genotype-by-sequencing data. We used maximum-likelihood and coalescent methods to evaluate the phylogenetic and population structure of the species. We compared these with a morphological dendrogram built from hierarchical clustering.

Results

Two of the three morphotypes formed separately evolving lineages, the third morphotype formed two geographically separate lineages, and northern trees with intermediate leaf morphology formed a separate fifth lineage. Leaflet size varied by over 35-fold, and although morphological clustering generally matched the genetic patterns, there were some overlaps, highlighting the cryptic diversity within this group.

Conclusions

Our genetic and morphological results provide some evidence that cultivated trees from different states in Brazil seem to have a limited genetic origin and do not reflect the broader genetic and geographical diversity of the species. As a result, more care is likely needed to preserve the overall genomic diversity of this endangered and iconic species.     

No longer a circumtropical species: revision of the lizardfishes in the Trachinocephalus myops species complex,with description of a new species from the Marquesas Islands

Trachinocephalus, a formerly monotypic and nearly circumtropical genus of lizardfishes, is split into three valid species. Trachinocephalus gauguini n. sp. is described from the Marquesas Islands and is distinguished from the two other species in the genus by having a shorter snout, a narrower interorbital space, larger eye and modally fewer anal‐fin and pectoral‐fin rays. The distribution of Trachinocephalus myops (type species) is restricted to the Atlantic Ocean and the name Trachinocephalus trachinus is resurrected for populations from the Indo‐West Pacific Ocean. Principal component analyses and bivariate plots based on the morphometric data differentiated T. gauguini from the other two species, but a substantial overlap between T. myops and T. trachinus exists. Phylogenetic evidence based on mtDNA COI sequences unambiguously supports the recognition of at least three species in Trachinocephalus, revealing deep divergences between the Atlantic Ocean, Indo‐West Pacific Ocean and Marquesas entities. Additional analyses of species delimitations using the generalized mixed Yule coalescent model and the Poisson tree processes model provide a more liberal assessment of species in Trachinocephalus, indicating that many more cryptic species may exist. Finally, a taxonomic key to identify the three species recognized here is provided.     

Evolution,systematics, and natural history of a new genus of cryptobiotic fungus‐growing ants

Xerolitor , a new, monotypic genus of fungus‐growing ants, is described to accommodate the phylogenetically isolated, relict species Mycetosoritis explicatus Kempf. We also diagnose the male and the larva of Xerolitor explicatus (Kempf) comb.n. and report ecological observations for the species, including nest architecture and foraging behaviour. Xerolitor explicatus comb.n. inhabits the dry habitats of the Brazilian Cerrado and the Bolivian and Paraguayan Gran Chaco. Bayesian multilocus phylogenetic analyses indicate that X. explicatus comb.n. is, contrary to some prior hypotheses, a member of the ‘higher’ fungus‐growing ants and the sister taxon of the genus Sericomyrmex Mayr. Results from phylogenetic analyses of the fungal cultivar grown by X. explicatus comb.n. in Paraguay, as well as the presence of gongylidia, indicate that the fungal mutualist is a member of the clade of higher fungal cultivar species and that it is probably the same species cultivated by some Trachymyrmex Forel and Sericomyrmex species.     

Curitiba (Myrtaceae): A new genus from the Planalto of southern Brazil

In the course of monographic work in Myrtaceae it has become evident thatEugenia prismatica cannot be accommodated within any existing genus in the family. Therefore, a new genus,Curitiba, is described to contain it and the new combinationCuritiba prismatica is made.Curitiba is diagnosed by a combination of 4-angled hypanthia and fruits, ovules radiating from a central protruding placenta, and seed coats with wavy rows of papillae. A key is provided to distinguishCuritiba from the Caribbean and Mesoamerican genusMosiera, where the species also had been placed before this transfer, and from other 4-merous genera in Brazil of subtribe Myrtinae. In the Atlantic Forest of Brazil where the family Myrtaceae is one of the most species rich and ecologically important plant families, the discovery ofCuritiba reveals a unique evolutionary lineage, highlights the endemism present in the Atlantic Forest, and underscores, the urgent need for conservation of this rapidly disappearing and highly endangered biome.     

Evidence of a landlocked reproducing population of the marine pejerrey Odontesthes argentinensis (Actinopterygii; Atherinopsidae)

In South America, the order Atheriniformes includes the monophyletic genus Odontesthes with 20 species that inhabit freshwater, estuarine and coastal environments. Pejerrey Odontesthes argentinensis is widely distributed in coastal and estuarine areas of the Atlantic Ocean and is known to foray into estuaries of river systems, particularly in conditions of elevated salinity. However, to our knowledge, a landlocked self-sustaining population has never been recorded. In this study, we examined the pejerrey population of Salada de Pedro Luro Lake (south-east of Buenos Aires Province, Argentina) to clarify its taxonomic identity. An integrative taxonomic analysis based on traditional meristic, landmark-based morphometrics and genetic techniques suggests that the Salada de Pedro Luro pejerrey population represents a novel case of physiological and morphological adaptation of a marine pejerrey species to a landlocked environment and emphasises the environmental plasticity of this group of fishes.