Habitat correlates of the Eurasian otter Lutra lutra recolonizing Central Poland

The increase in Eurasian otter Lutra lutra populations in their natural range and recolonization processes are recently observed in several European countries. We address the process of otter recolonization and habitat utilization in Central Poland over 14 years. Field surveys in 1998 and 2007 documented increase in occurrence of the species. The frequency of positive sites denoted 15 % in 1993, 38 % in 1998, and 89 % in 2007. Otter occurrence at study sites was positively affected by river width while negatively affected by presence of buildings at the site and river regulation. During the most intensive colonization process in the 1990s, the habitat preferences of the otter did not change. However, the sites inhabited by otters after 1998 were characterized by lower river width and tree cover and were more often located on regulated river sections, suggesting change in habitat tolerance during expansion. The otter abundance in transformed habitats is a result of increasing population numbers and the necessity to inhabit suboptimal sections of watercourses. Thus, it seems that presence–absence data for otter populations cannot be considered a reliable indicator of habitat quality, being depended of the population density.     

The combined effect of environmental factors and neighbouring populations on the distribution and abundance of Arvicola terrestris. An approach using rule-based models

We investigated how the interplay between environmental factors and presence of neighbouring populations determines the distribution and abundance of a small, endangered rodent, the water vole ( Arvicola terrestris ). We studied thriving and non-fragmented populations of water voles in the absence of their main predator, the introduced American mink ( Mustela vison ). A low degree of population fragmentation, such as the one characterizing the studied populations, was probably typical of water voles before their decline started. We found that under these conditions water voles' distribution is mainly determined by three environmental factors: presence of freshwater, adequate food, and cover. Variance in other factors is well tolerated by water voles. We obtained this result by the use of rule-based models in two separate areas. The two models correctly classified 81% and 83% of the observed cases, respectively. When optimised on one area and cross-validated on the other area the performance of the models was still high (73% and 79%) indicating that the models were robust and generalizable. We also found that the density of animals was lower in sub-optimal than in optimal habitat. We then tested the hypothesis that the number of neighbouring colonies determines the probability of finding voles in a given section. We found that the presence of nearby colonies was an important factor in determining the presence of water voles in sub-optimal habitat, while isolated patches of suitable habitat were less likely to host water voles. These observations suggest the possible presence of a source-sink dynamic, where an optimal habitat acts as a source for populating sub-optimal habitats that may be considered a sink habitat. These findings are discussed in the context of water vole conservation.     

Importance of scale,land‐use,and stream network properties for riparian plant communities along an urban gradient

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Capybara (Hydrochoerus hydrochaeris) distribution in agroecosystems: a cross-scale habitat analysis

Aim The aim of this study was to understand the spatial distribution of capybara (Hydrochoerus hydrochaeris) according to habitat attributes, using a multiscale approach based on fine‐ and broad‐scale variables in agroecosystems. Location Piracicaba river basin, south‐eastern Brazil (22°00′–23°30′ S; 45°45′–48°30′ W). Methods Potential habitats for capybara were selected in order to evaluate species presence/absence from October 2001 to December 2002. In each site, habitat attributes were sampled in the field (fine scale) and from GIS maps (broad scale) in terms of their presence or absence close to water. The variability of land cover between study sites was described by principal components analysis. Chi‐square tests were calculated for capybara presence/absence and the presence of each habitat attribute. A linear discriminant function analysis was used to describe to what extent the species’ presence could be explained by habitat attributes. Results The species presence was predominantly related to flat open areas (slope ranging from 0% to 6%) (χ² = 37.054, d.f. = 4, P < 0.001), covered by sugar cane or cultivated pasture (χ² = 84.814, d.f. = 9, P < 0.001). Terrain curvature, water meadows, aquatic vegetation, forest cover and open areas resulted in the best combination of variables, explaining 69.7% of capybara occurrence in the study sites in this river basin. Main conclusions Capybaras are widespread in the Piracicaba river basin, except in elevated areas. The spatial distribution of capybara was associated with the main types of land cover in the river basin – sugar cane plantations or pasture – both key food sources for capybara. This probably explains the species’ recent abundance in the region, since an intensive process of landscape alteration has taken place in this region owing to the expansion of agriculture in recent decades. These results may be useful in understanding the relationship between recent landscape modifications and the species’ population expansion in agroecosystems.     

European water voles in a reconnected lowland river floodplain: habitat preferences and distribution patterns following the restoration of flooding

Water voles have suffered large population declines in the United Kingdom due to habitat degradation and predation by invasive American mink. Habitat restoration of floodplain wetlands could help to reverse this decline, but the detailed habitat preferences of water voles in these environments have not been well studied, and the impacts of restoration practices on water vole populations are not known. This study investigated the habitat preferences of water voles in a reconnected lowland river floodplain. The results show that water voles preferred wider water bodies, and taller and more diverse vegetation. The impact of flooding on water voles was also investigated by comparing their occurrence between two survey periods which were separated by large flood events, and by comparing distribution patterns before and after restoration. Contrary to previous reports, there was no observed negative impact of flood events on water vole distribution, which has slightly expanded since the floodplain was reconnected to the river in 2009. Overall this study demonstrates that restored wetlands can provide suitable habitat for water voles, and provides guidance on some of the factors which should be considered when designing floodplains for water vole conservation.     

Riverine environmental characteristics and seasonal habitat use by adult Sakhalin taimen Hucho perryi

The study identified seasonal habitat use by endangered adult Sakhalin taimen Hucho perryi and the environmental characteristics of their habitat (water depth, amount of riparian forest and sinuosity). Fifteen adult H. perryi with acoustic tags were tracked by towing an acoustic receiver with a canoe in the Bekanbeushi River system in eastern Hokkaido Island, Japan, during each month from late April to late November 2008. Individuals mainly used midstream (shallower than downstream) habitats in all seasons. These locations were generally characterized by relatively dense riparian forests and high sinuosity, indicating the presence of pools. In spring, individuals used habitats with less riparian forest cover compared to mean value of the river channel. From spring to autumn, adult H. perryi selected limnologically complex habitats with meandering channels. From summer to autumn, individuals selected habitats with more riparian forest cover. The inverse relationship between H. perryi detection and riparian forest area in spring was a result of seasonal defoliation in deciduous riparian forests.     

Habitat usage of Daubenton's bat (Myotis daubentonii), common pipistrelle (Pipistrellus pipistrellus), and soprano pipistrelle (Pipistrellus pygmaeus) in a North Wales upland river catchment

Distributions of Daubenton's bat (Myotis daubentonii), common pipistrelle, (Pipistrellus pipistrellus), and soprano pipistrelle (Pipistrellus pygmaeus) were investigated along and altitudinal gradient of the Lledr River, Conwy, North Wales, and presence assessed in relation to the water surface condition, presence/absence of bank‐side trees, and elevation. Ultrasound recordings of bats made on timed transects in summer 1999 were used to quantify habitat usage. All species significantly preferred smooth water sections of the river with trees on either one or both banks; P. pygmaeus also preferred smooth water with no trees. Bats avoided rough and cluttered water areas, as rapids may generate high‐frequency echolocation‐interfering noise and cluttered areas present obstacles to flight. In lower river regions, detections of bats reflected the proportion of suitable habitat available. At higher elevations, sufficient habitat was available; however, bats were likely restricted due to other factors such as a less predictable food source. This study emphasizes the importance of riparian habitat, bank‐side trees, and smooth water as foraging habitat for bats in marginal upland areas until a certain elevation, beyond which bats in these areas likely cease to forage. These small‐scale altitudinal differences in habitat selection should be factored in when designing future bat distribution studies and taken into consideration by conservation planners when reviewing habitat requirements of these species in Welsh river valleys, and elsewhere within the United Kingdom.     

Population dynamics of tundra voles in relation to configuration of willow thickets in southern arctic tundra

The areal extent and configuration of thickets of willow shrubs are currently changing in the Arctic both as an effect of global warming and changed browsing pressure of reindeer. These changes have been predicted to impact the distribution and abundance of wildlife species relying on willow thickets as habitat. We assessed the relation between variables quantifying willow thicket configuration and population dynamics of tundra voles (Microtus oeconomus) in three riparian regions in Finnmark, northern Norway, which were subject to intense browsing by semi-domesticated reindeer. The tundra vole, which exhibits 5-year population cycles in Finnmark, is the dominant small rodent species in riparian landscape elements in southern arctic tundra. In the course of a 4-year trapping study, tundra vole populations went through the cyclic phases of increase, peak and crash, however, with distinct differences between the three regions in the population dynamics. Within regions, the occupancy pattern during the increase phase was positively related to willow thicket configuration (in particular edge density and willow height) only in the region attaining the highest abundance and occupancy. However, local abundance was not clearly related to habitat features within any regions. The lack of consistency in the response of tundra vole populations to willow thicket configuration, as well as the positive relation between the degree of thicket shredding and tundra vole habitat occupancy in one of the regions, indicates that tundra voles will not be much affected by climate or browsing induced changes in the shrubbiness of the tundra in the future.     

Influence of fine‐scale habitat requirements and riparian degradation on the distribution of the purple‐crowned fairy‐wren (Malurus coronatus coronatus) in northern Australia

Species distributions are influenced by variation in environmental conditions across many scales. Knowledge of fine‐scale habitat requirements is important for predicting species occurrence and identifying suitable habitat for target species. Here we investigate the perplexing distribution of a riparian habitat specialist, the western subspecies of the purple‐crowned fairy‐wren (Malurus coronatus coronatus), in relation to fine‐scale habitat associations and patterns of riparian degradation. Surveys of vegetation attributes, river structure and disturbance indicators that are likely to be causal determinants of the species occurrence were undertaken at 635 sites across 14 catchments. Generalized Linear Mixed Modelling demonstrated that the probability of purple‐crowned fairy‐wren occurrence increased with Pandanus aquaticus crown cover, shrub density and height of emergent trees, while riparian structure and signs of cattle were indirect predictors of occurrence. As our study area predominantly contained Pandanus type habitat, we failed to identify river grass as an important component of habitat. Predictions from a cross‐validated model of purple‐crowned fairy‐wren occurrence suggested distribution is constrained by three factors: (i) low quality of local habitat within catchments where the species occurs; (ii) broad‐scale reduction in habitat quality that has resulted in extinction of the species from parts of its range; and (iii) unmeasured variables that limit the exploitation of suitable habitat. The reliance of the species on dense shrubby understorey suggests conservation efforts should aim to maintain the complexity of understorey structure by managing fire and grazing intensity. Efforts to halt the continuing decline of riparian condition and maintain connectivity between areas of quality habitat will help to ensure persistence of riparian habitat specialists in northern Australia.     

Habitat selection for resting sites by the water opossum (Chironectes minimus) in the Brazilian Atlantic Forest

We evaluated the selection of resting sites occupied by the water opossum Chironectes minimus, between 2004 and 2010, in streams of the Brazilian Atlantic Forest. Fourteen radio-tracked adult (males and females) opossums used natural cavities as resting sites. Opossums selected narrow river stretches and selected their resting sites mainly according to characteristics favoring protection against adverse weather conditions. Likewise, opossums avoided disturbed habitats and established their resting sites in well-preserved riparian forest sites, selecting river sections containing a high density of trees and a high proportion of forest cover between the river banks and 50 m from the river. Besides increasing our knowledge on this species habitat selection, such findings further highlight this species’ sensitivity to human disturbance.     

River Food Web Response to Large-Scale Riparian Zone Manipulations

Conservation programs often focus on select species, leading to management plans based on the autecology of the focal species, but multiple ecosystem components can be affected both by the environmental factors impacting, and the management targeting, focal species. These broader effects can have indirect impacts on target species through the web of interactions within ecosystems. For example, human activity can strongly alter riparian vegetation, potentially impacting both economically-important salmonids and their associated river food web. In an Olympic Peninsula river, Washington state, USA, replicated large-scale riparian vegetation manipulations implemented with the long-term (>40 yr) goal of improving salmon habitat did not affect water temperature, nutrient limitation or habitat characteristics, but reduced canopy cover, causing reduced energy input via leaf litter, increased incident solar radiation (UV and PAR) and increased algal production compared to controls. In response, benthic algae, most insect taxa, and juvenile salmonids increased in manipulated areas. Stable isotope analysis revealed a predominant contribution of algal-derived energy to salmonid diets in manipulated reaches. The experiment demonstrates that riparian management targeting salmonids strongly affects river food webs via changes in the energy base, illustrates how species-based management strategies can have unanticipated indirect effects on the target species via the associated food web, and supports ecosystem-based management approaches for restoring depleted salmonid stocks.     

River otter and mink occupancy dynamics in riparian systems

Semi-aquatic mammals are dependent upon streams and riparian areas, which are a product of the landscapes they drain. Both local stream morphology and surrounding land use are likely to have important influences on current occupancy of semi-aquatic mammals and potentially affect future geographic distributions. We identified aspects of the riparian system and stream structure at multiple scales that relate to the presence of river otter (Lontra canadensis) and mink (Neovison vison) to better understand how changing landscapes affect occupancy dynamics of these semi-aquatic mammals and to facilitate future monitoring and management. We estimated multi-season occupancy using 103 sites sampled over 6 seasonal sampling periods in southern Illinois, USA (44,526 km²) during 2012–2014. We hypothesized river otter and mink occupancy were related to multiple aspects of landscape and local habitat attributes including land cover, water availability, human disturbance, and stream characteristics. Occupancy of river otter was predicted by large stream size, less developed area near the stream site, and proximity to areas with reintroduced or remnant populations of river otter. Mink were more likely to occupy sites with small streams and decreased water availability near the site. However, top models for both species had low weights and high uncertainty for multiple variables. Habitat-based models may not be the best predictors of occupancy for these carnivores because they are more likely to respond to prey diversity or availability, but landscape changes that decrease natural water availability and increase human disturbance to the stream at the local scale are likely to negatively affect river otter. © 2019 The Authors. The Journal of Wildlife Management published by Wiley Periodicals, Inc. on behalf of The Wildlife Society.     

Seedling establishment,mortality, tree growth rates and vigour of Acacia nilotica in different Astrebla grassland habitats: Implications for invasion

A demographic study was conducted in the northern Australian Astrebla grasslands to determine the importance of habitat type in influencing invasion patterns of Acacia nilotica, an exotic leguminous tree from Africa and Asia. One of the repeated patterns observed for A. nilotica is that denser populations are often associated with riparian habitats. Data available on this species do not enable us to determine which of a number of processes has lead to the formation of this pattern. Several explanations were tested for patterns in tree abundance: (i) that more seedlings emerge in wetter habitats; (ii) that mortality is lower in wetter habitats; (iii) that growth rates are faster in wetter habitats; and (iv) that plants are more vigorous (as indicated by leaf cover, flowering intensity and predation rates) over longer periods in wetter habitats. The study was stratified across three habitat types, perennial and ephemeral riparian and non‐riparian, which are characteristic of Astrebla grasslands and differentiated by the availability of water. In addition to testing for habitat‐linked differentiation in demography, data were also used to test whether seedling emergence, mortality, growth and vigour varied between sites with cattle versus sheep. The data collected indicated that seedling emergence, determined primarily by livestock dispersal, was likely to be the dominant influence on patterns of A. nilotica invasion. Mortality and growth rates were similar in ephemeral riparian and non‐riparian habitats, whereas perennial riparian habitats had more rapid growth rates, which may increase the rate of invasion in these areas. Plant vigour was also greater over longer periods in perennial riparian habitats with greater leaf cover, longer flowering season and fewer insect borer holes. Livestock species were found to have little influence on the demography of A. nilotica plants in this study. Very low growth rates and high mortality in A. nilotica populations are likely to lead to net decline in ephemeral riparian and non‐riparian habitats in the long term. The importance of episodic recruitment in the maintenance of A. nilotica populations is discussed.     

The impact of American mink Mustela vison and European mink Mustela lutreola on water voles Arvicola terrestris in Belarus

In the U.K. the impact of introduced American mink Mustela vison , on water voles Arvicola terrestris , may be exacerbated by habitat loss and fragmentation. Pristine wetlands in Belarus, which American mink invaded in the early 1990s, provide a three-pronged opportunity to test this hypothesis. First, we examine the evidence that, even in the unmanaged wetlands of our Belarussian study site, American mink have reduced water vole populations. Second, we ask whether habitat size, type and isolation mitigate the impact of American mink predation. Thirdly, we explore whether water voles are at greater risk of predation from American than European mink because of their patterns of habitat use. Following the invasion of American mink, water voles were most abundant in small, still-water sites, far from river banks, while American mink were most active in large, running-water sites. Small mammal remains were found in a higher percentage of American than European mink scats, and of these, more were water vole in American mink scats. The occurrence of water voles in scats of both mink species declined after the American mink invaded and established. Our results provide at least circumstantial evidence that American mink limit water vole populations even in unmanaged wetland eco-systems, and that they have a greater impact than their European congener at least partly because they make greater use of isolated marshes. Although by no means providing complete protection, the configuration and dispersion of available habitat mitigated the impact of American mink on water voles. This raises the possibility that habitat restoration, especially through the establishment of isolated enclaves, could help reduce the effect of American mink in the U.K. These observations are of broader interest in the context of assessing the effect of multiple pressures on vulnerable species.     

Occupancy and demographics of red river hog Potamochoerus porcus on Tiwai Island,Sierra Leone

The red river hog (Potamochoerus porcus, Linnaeus) is a species of Suidae with populations ranging from western to central Africa. Little is known about the population status of red river hog, and few studies have investigated habitat characteristics associated with their occupancy which is critical in determining possible reasons behind suspected population declines. We used camera traps and site occupancy models to examine the effects of habitat covariates on occupancy of red river hog on Tiwai Island and in surrounding forests of Sierra Leone during two field seasons, 2008–2011. We also estimated group size and composition and growth patterns of juveniles. In both sampling periods, understory vegetation strongly influenced red river hog occupancy with greatest association with riparian and swamp vegetation types. Red river hogs seemed to avoid habitats of high human impact such as farmbush and secondary growth forests. Average group size was 2.46 ± 0.28 (SE) hogs per group. Growth patterns of juveniles suggested the majority of piglets were born during the middle of dry season (January–February). Our research suggests landscape use by red river hog is influenced by presence of riparian habitats with dense vegetation.     

Habitat selection by a threatened desert amphibian

Habitat degradation and fragmentation are major drivers of amphibian declines. The loss of environmental features that allow for movement between water sources may be particularly detrimental for amphibians in arid environments. Climate changes will increase the importance of microhabitats to amphibians. Enhancing areas to facilitate movement may be a necessary conservation strategy for many animal species that depend on wetlands, including federally threatened Chiricahua leopard frogs (Lithobates chiricahuensis). Habitat preferences of this frog species are not well understood. We sought to better understand fine‐scale habitat selection, to inform conservation of Chiricahua leopard frogs. We conducted our study on the Ladder Ranch, a privately owned working bison ranch in New Mexico, USA that supports a large proportion of the remaining Chiricahua leopard frogs in the state. We attached radio transmitters to 44 frogs during summer 2014. We located each frog daily for up to 8 weeks (median = 30 days). We assessed fine‐scale habitat selection by comparing characteristics at each frog location and a random location 5 m away using conditional logistic regression. Frogs preferred features that likely reduce desiccation, even after accounting for the presence of water. Frogs selected areas with more low‐lying cover, especially aquatic vegetation and woody debris, a tree overstory, and a mud substrate. We recommend managing potential movement corridors for Chiricahua leopard frogs by ensuring the presence of muddy creek bottoms, woody debris, riparian overstory, low‐lying ground cover, and pools. Microclimates created by these features seem especially valuable given warming temperatures and modified precipitation regimes, resulting in decreased surface water, soil moisture, and vegetation cover. Retaining or creating preferred habitat features and microclimates in areas between water sources may increase connectivity among isolated populations of Chiricahua leopard frogs and could improve persistence and recovery of other water‐obligate species in arid landscapes.     

Niche differentiation in a postglacial colonizer,the bank vole Clethrionomys glareolus

Species‐level environmental niche modeling has been crucial in efforts to understand how species respond to climate variation and change. However, species often exhibit local adaptation and intraspecific niche differences that may be important to consider in predicting responses to climate. Here, we explore whether phylogeographic lineages of the bank vole originating from different glacial refugia (Carpathian, Western, Eastern, and Southern) show niche differentiation, which would suggest a role for local adaptation in biogeography of this widespread Eurasian small mammal. We first model the environmental requirements for the bank vole using species‐wide occurrences (210 filtered records) and then model each lineage separately to examine niche overlap and test for niche differentiation in geographic and environmental space. We then use the models to estimate past [Last Glacial Maximum (LGM) and mid‐Holocene] habitat suitability to compare with previously hypothesized glacial refugia for this species. Environmental niches are statistically significantly different from each other for all pairs of lineages in geographic and environmental space, and these differences cannot be explained by habitat availability within their respective ranges. Together with the inability of most of the lineages to correctly predict the distributions of other lineages, these results support intraspecific ecological differentiation in the bank vole. Model projections of habitat suitability during the LGM support glacial survival of the bank vole in the Mediterranean region and in central and western Europe. Niche differences between lineages and the resulting spatial segregation of habitat suitability suggest ecological differentiation has played a role in determining the present phylogeographic patterns in the bank vole. Our study illustrates that models pooling lineages within a species may obscure the potential for different responses to climate change among populations.     

Local and Regional Determinants of Colonisation-Extinction Dynamics of a Riparian Mainland-Island Root Vole Metapopulation

The role of local habitat geometry (habitat area and isolation) in predicting species distribution has become an increasingly more important issue, because habitat loss and fragmentation cause species range contraction and extinction. However, it has also become clear that other factors, in particular regional factors (environmental stochasticity and regional population dynamics), should be taken into account when predicting colonisation and extinction. In a live trapping study of a mainland-island metapopulation of the root vole (Microtus oeconomus) we found extensive occupancy dynamics across 15 riparian islands, but yet an overall balance between colonisation and extinction over 4 years. The 54 live trapping surveys conducted over 13 seasons revealed imperfect detection and proxies of population density had to be included in robust design, multi-season occupancy models to achieve unbiased rate estimates. Island colonisation probability was parsimoniously predicted by the multi-annual density fluctuations of the regional mainland population and local island habitat quality, while extinction probability was predicted by island population density and the level of the recent flooding events (the latter being the main regionalized disturbance regime in the study system). Island size and isolation had no additional predictive power and thus such local geometric habitat characteristics may be overrated as predictors of vole habitat occupancy relative to measures of local habitat quality. Our results suggest also that dynamic features of the larger region and/or the metapopulation as a whole, owing to spatially correlated environmental stochasticity and/or biotic interactions, may rule the colonisation – extinction dynamics of boreal vole metapopulations. Due to high capacities for dispersal and habitat tracking voles originating from large source populations can rapidly colonise remote and small high quality habitat patches and re-establish populations that have gone extinct due to demographic (small population size) and environmental stochasticity (e.g. extreme climate events).