Chromosome numbers of Costa Rican grasses

Chromosome counts are presented for 217 species of 103 genera of grasses from Costa Rica. Four of the genera and 90 of the species are reported for the first time. In addition, 26 counts differ from previous records for the same taxon. The generaGynerium, Lithachne, Luziola, andThrasya were heretofore unknown cytologically. First counts are also given for the following species:Agrostis bacillata, A. pittieri, A. sub patens, Andropogon angustatus, A. bicornis, A. virgatus, Aristida capillacea, A. jorullensis, Arundinella berteroniana, A. deppeana, Axonopus aureus, A. capillaris, A. chrysoblepharis, Bouteloua americana, B. disticha, Bromus exaltatus, Calamagrostis intermedia, C. nuda, C. pittieri, Chusquea lehmannii, C. tonduzii, Cinna poaeformis, Deschampsia pringlei, Digitaria panicea, Echinochloa polystachya, Echinolaena gracilis, Eragrostis simplicijlora, Eriochloa distachya, E. polystachya, Eriochrysis cayennensis, Festuca dolichophylla, Gymnopogon fastigiatus, Gynerium sagittatum, Hymenachne amplexicaulis, Imperata contracta, Isachne polygonoides, Ischaemum latijolium, Lithachne pauciflora, Luziola fragilis, Manisuris aurita, Panicum aquaticum, P. arundinariae, P. boliviense, P. cordovense, P. grande, P. haenkeanum, P. milleflorum, P. parviglume, P. pilosum, P. polygonatum, P. rudgei, P. stenodes, P. trichanthum, P. trichoides, P. viscidellum, Paspalum candidum, P. centrale, P. decumbens, P. fasciculatum, P. jimenezii, P. microstachyum, P. multicaule, P. nutans, P. parviflorum, P. pilosum, P. prostratum, P. pumilum, P. reclinatum, P. saccharoides, P. scabrum, P. serratum, P. squamulatum, P. standleyi, Pennisetum bambusiforme, P. distachyum, Pereilema beyrichianum, Pharus parvifolius, Sacciolepis myuros, Schizachyrium condensatum, Sorghastrum incompletum, Sporobolus ciliatus, S. purpurascens, Streptochaeta sodiroana, Thrasya gracilis, T. petrosa, T. robusta, Trisetum pringlei, T. tonduzii, Uniola pittieri, and Zeugites pittieri. In addition, the following counts are different from previous records for the same taxon:Aegopogon cenchroides, Axonopus poiophyllus, Bouteloua media, Brachiaria plantaginea, Chusquea subtessellata, Digitaria adscendens, Homolepis aturensis, Hymenachne donacifolia, Ichnanthus axillaris, I. pallens, I. tenuis, Ischaemum ciliare, Ixophorus unisetus, Oplismenus burmannii, O. hirtellus, Panicum geminatum, P. glutinosum, P. mertensii, P. parvifolium, P. sellowii, Paspalum convexum, Pennisetum nervosum, P. setosum, Polypogon elongalus, Raddia costaricensis, Schizachyrium hirtijlorum.     

Diversity of mesophilic clostridia in Costa Rican soils

Costa Rica is located in the Tropic, one of the most biologically diverse regions of the world; its soil is an important epicenter of biodiversity and Clostridium spp. are among the most frequent bacteria. The diversity of clostridia in Costa Rican soils and its possible association with geographic zone, pH or type of soil was studied in 117 soil samples: 18 from the Atlantic Zone, 30 from the Central Plateau, 30 from the Dry Pacific, 13 from the North Zone, and 26 from the South Pacific. The pH and the mesophilic clostridia species were determined for each sample. For bacterial isolation, a selective methodology for spores and pre-reduced anaerobically sterilized media were used. A total of 1945 strains of clostridia were isolated, 98% were identified and corresponded to 54 species; the most frequent species were C. subterminale (56%), C. oceanicum (51%), C. bifermentans and C. glycolicum (50%, each), C. sporogenes (49%), and C. sordellii (42%). An average of 7.1 species per sample was obtained; the Atlantic Zone showed the greatest diversity: 8.6 species per sample and a total of 45 species. Except for C. chauvoei, all described toxigenic clostridia species were isolated; C. sordellii (42%) and C. perfringens (38%) were the most frequent. No statistical relation could be established between geographic zone or type of soil and any species, showing that clostridia had a high adaptation capability to grow in different soil conditions; only some clostridia were isolated from very acidic samples while others from soils with a wide range of pH. In general, a uniform distribution of most species and a high variety of clostridia in Costa Rican soils were observed, in agreement with the high biodiversity described for other living beings in this country.     

Epiphytic and terrestrial mycorrhizas in a lower montane Costa Rican cloud forest

The epiphyte community is the most diverse plant community in neotropical cloud forests and its collective biomass can exceed that of the terrestrial shrubs and herbs. However, little is known about the role of mycorrhizas in this community. We assessed the mycorrhizal status of epiphytic (Araceae, Clusiaceae, Ericaceae, and Piperaceae) and terrestrial (Clusiaceae, Ericaceae) plants in a lower montane cloud forest in Costa Rica. Arbuscular mycorrhizas were observed in taxa from Araceae and Clusiaceae; ericoid mycorrhizas were observed in ericaceous plants. This is the first report of intracellular hyphal coils characteristic of ericoid mycorrhizas in roots of Cavendishia melastomoides, Disterigma humboldtii, and Gaultheria erecta. Ericaceous roots were also covered by an intermittent hyphal mantle that penetrated between epidermal cells. Mantles, observed uniquely on ericaceous roots, were more abundant on terrestrial than on epiphytic roots. Mantle abundance was negatively correlated with gravimetric soil water content for epiphytic samples. Dark septate endophytic (DSE) fungi colonized roots of all four families. For the common epiphyte D. humboldtii, DSE structures were most abundant on samples collected from exposed microsites in the canopy. The presence of mycorrhizas in all epiphytes except Peperomia sp. suggests that inoculum levels and environmental conditions in the canopy of tropical cloud forests are generally conducive to the formation of mycorrhizas. These may impact nutrient and water dynamics in arboreal ecosystems.     

Panbiogeographical analysis of Costa Rican freshwater fishes

Track analysis and Parsimony analysis of endemicity (PAE) were performed to analyze the distribution pattern of Costa Rican freshwater fishes. A basic matrix (presence/absence) was prepared using the distribution of 77 freshwater fish. The data were analyzed with CLIQUE software in order to find generalized tracks (cliques). Data also were analyzed with the software NONA and Winclada version 1.00.08 in order to perform the Parsimony Analysis of Endemicity (PAE). Fourteen equally probable cliques were found with 31 species in each and the intersection of the amount was selected as a generalized track dividing the country in two main zones: Atlantic slope from Matina to Lake Nicaragua and Pacific slope from the Coto River to the basin of the Tempisque River connected with some branches oriented to the central part of the country. PAE analysis found ten cladogram areas (72 steps, CI=0.45, RI=0.64), using the "strict consensus option" two grouping zones were identified: Atlantic slope and Pacific slope. Both PAE and Track Analysis show the division of the two slopes and the orientation of the generalized track suggests new biogeographical evidence on the influence of both old and new southern elements to explain the migrations of freshwater fish into Central America during two different geological events.     

Growth of Mantled Howler Groups in a Regenerating Costa Rican Dry Forest

We examined population dynamics in mantled howlers (Alouatta palliata palliata) in a regenerating tropical dry forest in Santa Rosa National Park (SRNP), Costa Rica. The population has grown at a rate of about 7% per annum during the past decade. The growth in numbers from 342 in 1984 to 554 in 1992 reflects an increase in the number of groups (from 25 to 34) and a slight increase in their average size (from 13.6 to 16.3). Population density has increased from 4.9 to 7.9 individuals per km ². Santa Rosa's population density and group compositions are similar to those at several other mantled howler sites, but densities of mantled howlers are much higher at two other well-studied sites: La Pacifica and Barro Colorado Island (BCI). We relate the low density of howlers at Santa Rosa to local historical and ecological factors. Howler populations at high and low densities differ in average group size and sex ratio. At high population densities, groups are larger and include more adult females. The number of male howlers per group appears to be more strictly limited and less variable than the number of females is. However, there is greater variation in male group membership at Santa Rosa than at La Pacifica or BCI, and at Santa Rosa there are more generating forests available into which males and females can disperse and form new groups. We present case studies describing two ways in which new howler groups are formed, and we suggest that, compared to females and compared to males at high density sites, males are relatively advantaged in the uncrowded habitats at Santa Rosa and other low density sites.     

In situ nutrient assays of periphyton growth in a lowland Costa Rican stream

Nutrient limitation of primary production was experimentally assessed using an in situ bioassay technique in the Quebrada Salto, a third-order tropical stream draining the northern foothills of the Cordillera Central in Costa Rica. Bioassays employed artificial substrata enriched with nutrients that slowly diffuse through an agar-sand matrix (Pringle & Bowers, 1984). Multiple comparisons of regression coefficients, describing chlorophyll-a accrual through time for different nutrient treatments, revealed positive micronutrient effect(s). Micronutrient treatment combinations (Fe, B, Mn, Zn, Co, Mo, EDTA), supplemented with and without nitrate and phosphate, exhibited significantly greater chlorophyll-a accrual over all other treatments (P < 0.05), supporting over three times that of the control after 14-d of substratum colonization. Neither of the major nutrients (N or P) produced a significant stimulation, although the N treatment displayed 50% more chlorophyll-a than the control after 14-d. Similarly, Si, EDTA, and Si + N + P treatments did not exhibit chlorophyll-a response curves that were significantly different from the control. During the experiment, mean NH₄-N and (NO₂ + NO₃)-N concentrations in the Salto were 2.0 µM (28.6 µg · l^–1) and 7.2 µM (100.2 µg · l ^–1), respectively. High concentrations of PO₄-P ( = 2.0 µM; 60.9 µg · l^–1) and TP ( = 3.0 µM; 94.0 µg · l^–1) were also found, and consequently low molar N:P ratios = 4.7). Despite the potential for N limitation in the system, both N and P appear to be at growth saturating levels. This may be due to micronutrient limitation and/or light limitation of periphyton growth in densely shaded upstream portions of the stream.     

Swimming ability in three Costa Rican dry forest rodents

We investigated the swimming abilities of three Costa Rican dry forest rodents (Coues' rice rat. Oryzomys couesi, hispid cotton rat, Sigmodon hispidus, and spiny pocket mouse, Liomys salvini) associated with a large marsh, Laguna Palo Verde, using 90 s swim trials in a plastic container. Swimming ability was evaluated by observing the use of limbs and tail in the water, inclination to the surface, and diving and floating behavior. Rice rats could float, swim and dive, suggesting that they can exploit surface and underwater resources. Cotton rats swam at the water's surface, but were less skilled swimmers than rice rats. Spiny pocket mice tired quickly and had difficulty staying at the water's surface. Results suggest that differential swimming ability is related to the distribution of the three sympatric species within the marsh and adjacent forest habitats.     

Rodent pollination of Blakea (Melastomataceae) in a Costa Rican cloud forest

Several species of rodents have been observed visiting the flowers of an undescribed species ofBlakea (Melastomataceae) in a cloud forest in Costa Rica. The rodents drink the copious nectar secreted at the base of the stamens and are dusted with pollen. The first report of pollination by non-flying mammals in the neotropics suggests that this type of pollination may be important where there is little competition with bats.     

Genotoxicity of three pesticides used in Costa Rican banana plantations

The in vitro genotoxicity of imazalil and thiabendazole fungicides and the insecticide chlorpyrifos, compounds used in Costa Rican banana plantations, was evaluated with the single-cell gel electrophoresis technique (comet assay). The comet assay is a simple, rapid and low cost technique for quantification of DNA damage. This assay detects DNA single-strand breaks and alkali-labile sites in individual cells. The effects were analyzed by using human lymphocytes exposed to doses of 0, 25, 50, 75 and 100 microg/ml of each pesticide for 30 min at 37 degrees C. The cells were embedded in agarose, lysed, subjected to alkaline electrophoresis (pH >13) for 20 min at 25V, neutralized and dehydrated to be stained with a fluorescent dye and later comets visualization with the epifluorescence microscope. Chlorpyrifos and imazalil induced significant DNA damage in a dose-dependent manner. Chlorpyrifos was the major inductor of DNA breaks. These results indicate that both are genotoxic compounds in vitro. Thiabendazole fungicide did not induced DNA damage using the comet assay for all concentrations tested.     

Observations on the plankton of some Costa Rican lakes

We sampled 30 lakes in Costa Rica in the wet season (July–August) of 1991 for phytoplankton (with integrated and whole water samples), and 17 for zooplankton (with net tows). Taxa of plankton and community richness were poorly related to geography, morphology, chemistry, and other biota. Neither the zooplankton nor the phytoplankton appeared to influence the composition of the other, and neither were apparently influenced by the presence of fish.Phytoplankton richness reflected primarily sampling method, but also tended to decrease with elevation and with Secchi disk depth, and tended to increase with pH and alkalinity. Chlorophytes were the most abundant division in 14 lakes; these lakes tended to be unstratified, turbid, and located at higher elevation. Diatoms were common in 4 of the 7 lakes with elevated silica (over 30 ppm). Each lake showed at least a 3 : 1 dominance by copepods, cladocera, or insect larvae. Copepods dominated 7 of the 17 lakes, most of which were shallow, turbid, and had low alkalinity. Cladocera dominated 7 lakes that were typically deeper and located at low-to mid-elevations. Insect larvae dominated two small, turbid lakes.     

Carbon allocation in a Costa Rican dry forest derived from tree ring analysis

The rising discussion on carbon balance of tropical forests often does not consider the sequestration potential of secondary dry forests, which are becoming an increasing importance due to land use change and reforestation. We have developed an easy applicable tool for the estimation of biomass increment of tropical secondary forest stands on the base of tree ring analysis. The existence of annual rings was shown by a combination of anatomical examination and radiocarbon estimations. With tree ring analysis, forest inventories and destructive sampling the above-ground biomass increment of secondary forest stands of age between 9 and 48 years in the dry forest region of Guanacaste, Costa Rica were estimated. The above-ground biomass increment of the tree layer varies between 2.4 and 3.2 Mg/ha yr in different stands. Lianas contribute with up to 23% additional production. Differences in productivity among the stands along a chronosequence were not significant. The measured carbon allocation potential of 1.7–2.1 Mg C/ha yr lies in the range of reported values from other tropical dry forests and old growth humid forests as well.     

Changes in diversity along a successional gradient in a Costa Rican upper montane Quercus forest

Changes in terrestrial vascular plant diversity along a successional gradient were studied in a Costa Rican upper montane Quercus forest. In 1991 and 1992 species presence and cover were recorded in 12 successional 0.1 ha forest plots. A total of 176 species in 122 genera and 75 families were found. Asteraceae was the most speciose family. With the help of TWINSPAN three successional phases were classified: (i) Early Secondary Forest (ESF, 145 spp.), (ii) Late Secondary Forest (LSF, 130 spp.) and (iii) Primary Forest (PF, 96 spp.). Detrended Correspondence Analysis (DCA) species ordination using DECORANA illustrates that different ecological species groups can be distinguished along the time sequence. Alpha diversity (Shannon-Wiener index, among others) in ESF and LSF was significantly greater than in PF. This is probably explained by downslope migration of numerous sub(alpine) species to cleared and recently abandoned montane sites. Beta diversity applying Sørensen's similarity coefficients declined during succession. Using linear regression, the minimum time required for floristic recovery following disturbance and abandonment was calculated at 65.9 years. A comparison with other studies shows that secondary forests in upper montane Costa Rica can be as diverse as in neotropical lowlands.     

Resin-core and buried-bag estimates of nitrogen transformations in Costa Rican lowland rainforests

We compared the resin-core and buried-bag incubation methods for estimating nitrogen (N) transformation rates using the ¹⁵N pool dilution technique in alluvial soils of an early successional forest (ESF) and an old-growth forest (OGF) at the La Selva Biological Station in Costa Rica. Soil cores (38×100-mm) from both forests were incubated in situ for 7 days. The two methods gave generally similar estimates of net N mineralization rates for the two forests. Estimates of ammonium production by the resin-core method were higher than those by the buried-bag method in ESF, but did not differ significantly in OGF (p<0.05). Estimates of nitrate production by the two methods did not differ significantly. Nitrate averaged 74% and 81% of the total inorganic N production in ESF and OGF, respectively. Net N mineralization in ESF (6.6 mmol m^-2d^-1) did not differ significantly from that in OGF (5.0 mmol m^-2d^-1). Fluxes of ammonium and nitrate were high for both forests, but the OGF tended to have higher gross mineralization and nitrification rates than ESF. Approximately 60% of the gross nitrate production and less than 30% of the ammonium were immobilized by microorganisms.     

Long-term comparison of the fish community in a Costa Rican rocky shore marine reserve

Despite their role in supporting diverse marine fish communities, tropical rocky shores and reefs have attracted less research and fewer targeted conservation efforts compared to coral reefs. We studied fish community composition in Playa Blanca Marine Reserve (9 degrees 40' N - 84 degrees 40' W), a rocky shore site on the central Pacific coast of Costa Rica. We conducted visual surveys of fishes along six strip transects soon after the area was designated a marine reserve in 1995, then again in 2006 following an eleven-year period of complete protection. We recorded a total of 31 406 sightings of 72 species from 30 families. Pomacentrids (42.5%), labrids (16.6%) and haemulids (14.8%) dominated the community, accounting for > 70% of total fish abundance. In comparison to other sites in the region, the fish community was more similar to one reported from Bahia Honda, Panama (7 degrees 50' N - 81 degrees 35 W) than from the geographically more proximate Culebra Bay, Costa Rica (10 degrees 45' N - 85 degrees 43 W). Sixty-one species from 26 families were recorded in 1995; sixty-nine species from 28 families in 2006. Our results suggest that the Playa Blanca Marine Reserve is fulfilling its conservation role. Average fish abundance, species richness and Shannon's index of community diversity were greater in 2006 than 1995, and fish community composition varied significantly within each transect among years. Much of the change in community composition among years resulted from spatial and temporal variation in the abundance of a few dominant species, including Abudefduf troschelli, Thalassoma lucasanum, Chromis atrilobata, and Stegastes flavilatus/acapulcoensis. Of the 48 species/species groups recorded in both years, 37 (77%) were more abundant in 2006 than 1995, and several species recorded as uncommon or rare in 1995 were more frequent and abundant in 2006. Fish community composition and the abundance of some species changed in the reserve over time, but further study is needed to determine the role of small-scale marine reserves in the conservation of tropical marine biodiversity.     

Removal of seeds from frugivore defecations by ants in a Costa Rican rain forest

At our Costa Rican field site, seeds defecated by frugivorous birds usually do not remain where they have been deposited. Many species of ants are attracted to frugivore defecations and remove seeds and/or pulp. Pheidole species selectively remove seeds, fungus-growing species (tribe Attini) remove both pulp and seeds. Seeds of many Melastomataceae have an appendage, which we hypothesized is an elaiosome. Indeed, preference trials demonstrated that two species of Pheidole selected seeds with the appendage over seeds of the same species in which the appendage had been removed. However, we found that these ants did not take the appendage when it was offered by itself. We conclude that the appendage is not an elaiosome. In further trials, different ant species preferentially selected different seed species. These ants consumed some seeds and deposited others unharmed in refuse piles. We conclude that because the composition of leaf-litter ant communities is highly variable between neighboring square meter plots, and the probability of seed predation depends upon the species of ant, the over-all effect of ants on seed shadows and seed banks is spatially unpredictable. Addendum: The names of the two Pheidole emphasized in this study. P. nebulosa and P. nigricula, are unpublished names from a generic revision being prepared by E. O. Wilson and W. L. Brown. Their use here is not intended to constitute taxonomic publication but is solely for more precise indentification in future ecological research of similar nature     

Olfactory communication among Costa Rican squirrel monkeys: a field study.

Behaviors with a possible role in olfactory communication among troop members were investigated as part of a field study on the reproductive and foraging ecology of squirrel monkeys (Saimiri oerstedi) in Costa Rica. All age classes engaged in the olfaction-related behaviors. Apart from olfactory investigation of female genitals by males during the mating season, no other potential olfaction-related behavior (urine wash, branch investigation, rump, chest, back rub and sneeze) exceeded 1% of mean behavioral samples. Assessment of reproduction condition appears to be the primary function of such olfactory investigation of the female genital region. The primary function of urine washing is suggested to be the general communication of reproductive status, possibly facilitating reproductive synchrony. Sneezing, rump, back and chest rubbing do not appear to deposit substances active in olfactory communication.