Oxygen uptake induced by electron transfer from donors to the triplet state of methylene blue and xanthene dyes in air-saturated aqueous solution.

The effects of oxygen in the photolysis of rose bengal, eosin, erythrosin and methylene blue were studied in the presence of formate and electron donors, such as ascorbic acid, aromatic amino acids or aliphatic amines, e.g. triethylamine (TEA). The overall reaction is conversion of oxygen via the hydroperoxyl/superoxide ion radical into hydrogen peroxide. The quantum yield of oxygen uptake (Phi(-O2)) increases with the donor concentration. The photoinduced formation of H2O2 is initiated by quenching of the triplet state of the dye by the donor and subsequent reactions of both the dye and donor radicals with oxygen. For methylene blue and the xanthene dyes in the presence of 10 mM ascorbic acid or 0.1 M TEA Phi(-O2)=0.07-0.25. The spectral and kinetic properties of the specific dye transients, including the radicals involved and the pH and concentration dependences, are discussed.     

Eosin interaction of alpha-synuclein leading to protein self-oligomerization

Among various dyes including congo red, thioflavin S, thioflavin T, eosin, rhodamine 6G, and phenol red, the eosin was the only dye that induced self-oligomerization of alpha-synuclein in the presence of a chemical coupling reagent of N-(ethoxycarbonyl)-2-ethoxy-1, 2-dihydroquinoline. To analyze chemical nature of the eosin interaction with alpha-synuclein, the phenomenon of self-oligomerization was further examined with eosin congeners such as ethyl eosin, eosin B, phloxine B, erythrosin B, and rose bengal. The followings are the conclusions we have reached. First of all, intactness of the benzoate moiety of eosin and the negative charge on the carboxylic group of the dye are important factors leading to the specific interaction with alpha-synuclein. Secondly, the localized negative charge on the xanthene moiety of eosin is another critical factor for the interaction. As far as substituting halides are concerned, bromides and iodides on the xanthene moiety of the dyes do not make any difference on the alpha-synuclein interaction because both eosin and erythrosin B have induced the common phenomenon of self-oligomerization. The binding curve between eosin and alpha-synuclein was sigmoidal as the dye concentrations were increased. A double reciprocal plot of the saturation curve showed that the maximum number of eosin binding sites on alpha-synuclein was 1.85 with a dissociation constant of 390 microM. The dye binding to the protein appeared to occur via a positive cooperativity. The eosin binding site(s) was suggested to be located predominantly on the NAC region and partly related to the acidic C-terminus of alpha-synuclein. It has been, therefore, expected that this information might be useful to develop alpha-synuclein interactive molecules, which could provide eventual preventive or possible therapeutic means against various alpha-synuclein related disorders including Parkinson's disease.     

The Fluorane Derivatives: Methods for the Standardization of Biological Stains: Part II

In this paper the methods are given which are used in determining whether to approve the sale of certain dyes of the fluorane group as certified biological stains. The methods have been worked out by the Commission on Standardization of Biological Stains in cooperation with the Color and Farm Waste Division, Bureau of Chemistry and Soils, U. S. Dept. of Agriculture. The dyes for which the methods are given in the present paper are: Fluorescein, eosin yellowish, ethyl eosin, eosin bluish, erythrosin, phloxine B, and rose bengal. For each of these dyes methods are given under the following headings: (1) identification or qualitative examination; (2) quantitative analysis; and (3) biological tests.     

Envelopes for Filing Microscopic Slides

The writers discuss a series of investigations as to the behavior of certain fluorescein dyes (eosin, erythrosin, phloxine, and rose bengal) in staining bacteria in dried films of soil. These dyes are ordinarily purchased in the form of di-sodium salts and are indifferent staining agents for the purpose named. If there be added to the dye solution a small amount (0.001 to 0.1%) of a mineral salt of calcium, aluminium, magnesium or lead, the intensity of staining is greatly increased. The effect of such addition is to convert the dye partly into a salt of the metal added, which in nearly every instance is relatively insoluble and is in every case less soluble than the di-sodium salt. It is shown that practically identical results can be obtained if the staining be performed with a suspension of the calcium, aluminium or lead salt of one of these dyes, altho very little of the dye goes into solution.

Theories to account for the phenomenon are discussed, including in particular the solution and adsorption theories of staining. The evidence seems to favor the former, altho not entirely disproving the latter.     

Certain Factors Influencing the Staining Properties of Fluorescein Derivatives

The writers discuss a series of investigations as to the behavior of certain fluorescein dyes (eosin, erythrosin, phloxine, and rose bengal) in staining bacteria in dried films of soil. These dyes are ordinarily purchased in the form of di-sodium salts and are indifferent staining agents for the purpose named. If there be added to the dye solution a small amount (0.001 to 0.1%) of a mineral salt of calcium, aluminium, magnesium or lead, the intensity of staining is greatly increased. The effect of such addition is to convert the dye partly into a salt of the metal added, which in nearly every instance is relatively insoluble and is in every case less soluble than the di-sodium salt. It is shown that practically identical results can be obtained if the staining be performed with a suspension of the calcium, aluminium or lead salt of one of these dyes, altho very little of the dye goes into solution.

Theories to account for the phenomenon are discussed, including in particular the solution and adsorption theories of staining. The evidence seems to favor the former, altho not entirely disproving the latter.     

Interaction of rose bengal with mung bean aspartate transcarbamylase

The fluorescein dye, rose bengal in the dark: (i) inhibited the activity of mung bean aspartate transcarbamylase (EC 2.1.3.2) in a non-competitive manner, when aspartate was the varied substrate; (ii) induced a lag in the time course of reaction and this hysteresis was abolished upon preincubation with carbamyl phosphate; and (iii) converted the multiple bands observed on polyacrylamide gel electrophoresis of enzyme into a single band. The binding of the dye to the enzyme induced a red shift in the visible spectrum of dye suggesting that it was probably interacting at a hydrophobic region in the enzyme. The dye, in the presence of light, inactivated the enzyme and the inactivation was not dependent on pH. All the effects of the dye could be reversed by UMP, an allosteric inhibitor of the enzyme. The loss of enzyme activity on photoinactivation and the partial protection afforded by N-phosphonoacetyl-L-aspartate, a transition state analog and carbamyl phosphate plus succinate, a competitive inhibitor for aspartate, as well as the reversal of the dye difference spectrum by N-phosphonoacetyl-L-aspartate suggested that in the mung bean aspartate transcarbamylase, unlike in the case ofEscherichia coli enzyme, the active and allosteric sites may be located close to each other.     

Phylogeny and ontogeny of the phosphoglycerate mutases.--V. Inactivation of phosphoglycerate mutase isozymes by histidine-specific reagents

1. The three isozymes of glycerate-2,3-P2 dependent phosphoglycerate mutase present in tissues of mammals and reptiles were inactivated by both treatment with diethylpyrocarbonate and photooxidation with rose bengal. 2. Inactivation of type M isozyme purified from rabbit muscle was complete when two histidine residues per enzyme subunit were carboethoxylated. Hydroxylamine removed the carboethoxy groups, with partial recovery of the enzymatic activity. The cofactor protected the enzyme against inactivation. 3. The inactivation of rabbit muscle phosphoglycerate mutase by photooxidation with methylene blue and rose bengal was sharply pH dependent. The pH profile of enzyme inactivation followed the titration curve of histidine, suggesting that this amino acid was critical for enzyme activity. Glycerate-2,3-P2 did not protect phosphoglycerate mutase against photoinactivation.     

The fate of cytochrome b559during anaerobic photoinhibition and its recovery processes

The function of the cytochrome b₅₅₉, a Photosystem II (PS II) reaction center ubiquitous component is not yet known. Cytochrome b₅₅₉appears in a high (HP) or low (LP) potential form. The HP form is converted into the LP form during aerobic photoinhibition. It has been proposed before that this conversion, assumed to be reversible, ascribes protection against light stress of PS II by redirecting electron flow within PS II thus avoiding charge recombination of the primary radical pair and related oxidative damage. Here, we have used an experimental system allowing to assay the relation between the cytochrome b₅₅₉redox potential shift, its reversibility and protection against light induced PS II inactivation. Under anaerobic conditions fast reversible photoinactivation of PS II in isolated spinach thylakoids is observed accompanied by monomerisation of PS II. Monomers did not dissociate further into PS II sub-particles and did not migrate out of the grana partitions as observed in aerobic photoinactivation. The anaerobic photoinactivation is accompanied by an increase in the cytochrome b₅₅₉LP/HP ratio. However, despite recovery of PS II activity and partially of its dimeric form in darkness under aerobic conditions, no reversal of the cytochrome b₅₅₉redox potential shift accompanied these processes. Re-exposure of reactivated thylakoids having an increased PS II population in the LP form of the cytochrome b₅₅₉to strong illumination under aerobic conditions, did not result in a measurable protection of PS II as compared to control thylakoids. While it is possible that cytochrome b₅₅₉may play a protective role against light stress in PS II, the results presented here do not indicate that the increase in the ratio LP/HP form is involved in this process.     

Indirect inactivation of tyrosinase in its action on tyrosine

Under aerobic conditions, tyrosinase is inactivated by dopa as a result of suicide inactivation, and, under anaerobic conditions, as a result of irreversible inactivation. However, tyrosine protects the enzyme from being inactivated by dopa under anaerobic conditions. This paper describes how under aerobic conditions the enzyme acting on tyrosine is not directly inactivated but undergoes a process of indirect suicide inactivation provoked by reaction with the o-diphenol originated from the evolution of o-dopaquinone and accumulated in the reaction medium.     

Inhibition of Escherichia coli DNA polymerase I by rose bengal

The fluorescein dye, rose bengal, inhibits Escherichia coli DNA polymerase I reversibly in the dark and irreversibly in the light. The reversible inhibition, which occurs in the micromolar concentration range, is competitive with respect to the poly(dA-T) template/ primer and noncompetitive with respect to the complementary deoxynucleoside triphosphates. The Hill coefficient for the inhibition by rose bengal is 3.0. Equilibrium dialysis experiments using ¹³¹I-labeled rose bengal have demonstrated direct binding of the inhibitor to the enzyme. No dye binds to poly(dA-T) at concentrations where the inhibition is observed. There are 22 ± 3 rose bengal binding sites per polymerase which can be subdivided into a class of high affinity sites and one of low affinity sites. The high affinity sites (3 μm) bind rose bengal with a Hill coefficient of 1.7 and are responsible for the observed inhibition. The low affinity sites (7μm) are more numerous (about 16) and bind rose bengal in a noncooperative manner. The displacement of rose bengal from the enzyme by poly(dA-T) at equilibrium confirms the competition between poly(dA-T) and rose bengal inferred from the kinetic data for the polymerization reaction. The inhibition of the 3′,5′ exonuclease activity and the template-directed dATP ? P-P exchange reaction by rose bengal is fully consistent with the interaction of rose bengal at the polynucleotide binding site. The enzyme induces an extrinsic Cotton effect in the visible absorption of rose bengal. The abolition of this Cotton effect by poly(dA-T) further supports the proposed site of binding of the dye.     

Phototoxic potential of afloqualone, a quinazolinone derivative, as determined by photosensitized inactivation of bacteriophage

Effect of UV-A irradiation on bacteriophage lambda in the presence of afloqualone (AQ) was examined to obtain in vitro evidence for phototoxic potential of AQ, a centrally acting muscle relaxant. Neither AQ itself nor the long-lived photoproducts affected viability of the phage, but the phage was inactivated when it was irradiated in the presence of the drug. Photosensitized inactivation was efficiently repressed by the presence of radical scavengers such as hydroquinone, cysteamine and cystein but not by D-mannitol, benzoate, formate and dimethyl sulfoxide (.OH scavengers). Methionine also inhibited inactivation as well. Sodium azide and tryptophan followed them, but 1,4-diazabicyclo[2.2.2]octaine (DABCO) did not reduce the inactivation rate. Deuterium effect was not observed. AQ-sensitized photoinactivation occurred even under anoxic conditions although the rate was lower than under aerobic conditions. In view of these results, Type I process is more suitable for explanation of AQ-sensitized photoinactivation than Type II process.     

Tyrosinase inactivation in its action on dopa

Under aerobic or anaerobic conditions, tyrosinase undergoes a process of irreversible inactivation induced by its physiological substrate l-dopa. Under aerobic conditions, this inactivation occurs through a process of suicide inactivation involving the form oxy-tyrosinase. Under anaerobic conditions, both the met- and deoxy-tyrosinase forms undergo irreversible inactivation. Suicide inactivation in aerobic conditions is slower than the irreversible inactivation under anaerobic conditions. The enzyme has less affinity for the isomer d-dopa than for l-dopa but the velocity of inactivation is the same. We propose mechanisms to explain these processes.     

The photodynamic inactivation of Candida guilliermondii in the presence of photodithazine

Photodithazine, a glucosamine salt of chlorin e6, enhanced the inactivation of Candida guilliermondii cells by visible light. The sensitizing effect of photodithazine was found to be related to free or cell surface-bound molecules of this dye. Sodium azide (a singlet oxygen quencher) and propyl gallate (an inhibitor of lipid peroxidation) protected yeast cells from the photodithazine-enhanced photoinactivation.     

Photooxidation of skeletal muscle sarcoplasmic reticulum induces rapid calcium release.

The photooxidizing xanthene dye rose bengal is shown to induce rapid Ca2+ release from skeletal muscle sarcoplasmic reticulum (SR) vesicles. In the presence of light, nanomolar concentrations of rose bengal increase the Ca2+ permeability of the SR and stimulate the production of singlet oxygen (1O2). In the absence of light, no 1O2 production is measured. Under these conditions, higher concentrations of rose bengal (micromolar) are required to stimulate Ca2+ release. Furthermore, removal of oxygen from the release medium results in marked inhibition of the light-dependent reaction rate. Rose bengal-induced Ca2+ release is relatively insensitive to Mg2+. At nanomolar concentrations, rose bengal inhibits [3H]ryanodine binding to its receptor. beta,gamma-Methyleneadenosine 5'-triphosphate, a nonhydrolyzable analog of ATP, inhibits rose bengal-induced Ca2+ release and prevents rose bengal inhibition of [3H]ryanodine binding. Ethoxyformic anhydride, a histidine modifying reagent, at millimolar concentrations induces Ca2+ release from SR vesicles in a manner similar to that of rose bengal. The molecular mechanism underlying rose bengal modification of the Ca2+ release system of the SR appears to involve a modification of a histidyl residue associated with the Ca2+ release protein from SR. The light-dependent reaction appears to be mediated by singlet oxygen.     

Fluorescein Dyes as Bacterial Stains with Special Reference to their Use for Soil Preparations

Erythrosin and rose bengal have been suggested in the past as bacterial stains, particularly in the case of the direct study of microorganisms in soil. The writers have made a further investigation of these two dyes and others of the same group (thirteen in all) to determine their relative merits for this purpose. It is found that practically all the deeper colored dyes of the group stain bacteria in pure culture satisfactorily; but that in the case of soil infusions some of the dyes have such an affinity for the dead organic matter as to obscure the bacteria present. Best results in the present work were obtained with rose bengal B; but it is pointed out that good staining effects may be obtained with the phloxines and erythrosins. The behavior of any one of these dyes when applied to a soil preparation varies according to the reaction of the material stained; and this is mentioned as a possible explanation as to why others have found better results with erythrosin than with rose bengal.     

Essential histidine residues in coenzyme B12-dependent diol dehydrase: dye-sensitized photooxidation and ethoxycarbonylation

The apoenzyme of diol dehydrase was inactivated by photoirradiation in the presence of rose bengal or methylene blue, following pseudo-first-order kinetics. The inactivation rates were markedly reduced under a helium atmosphere, suggesting that the inactivation is due to photooxidation of the enzyme under air. The half-maximal rate of methylene blue-sensitized photoinactivation was observed at pH around 7.5. Amino acid analyses indicated that one to two histidine residues decreased upon the dye-sensitized photoinactivation, whereas the numbers of tyrosine, methionine, and lysine did not change. Ethoxyformic anhydride, another histidine-modifying reagent, also inactivated diol dehydrase, with pseudo-first-order kinetics and a half-maximal rate at pH 7.7. It was shown spectrophotometrically that three histidine residues per enzyme molecule were modified by this reagent with loss of enzyme activity. Two tyrosine residues per enzyme molecule were also modified rapidly, irrespective of the activity. The photooxidation or ethoxycarbonylation of the enzyme did not result in dissociation of the enzyme into subunits, but deprived the enzyme of ability to bind cyanocobalamin. The percentage loss of cobalamin-binding ability agreed well with the extent of inactivation. The enzyme-bound hydroxocobalamin showed only partial protecting effect against photoinactivation and resulting loss of the cobalamin-binding ability. These results provide evidence that diol dehydrase possesses essential histidine residues which are required for the coenzyme binding.     

Fluorescein Dyes as Bacterial Stains with Special Reference to their Use for Soil Preparations

Erythrosin and rose bengal have been suggested in the past as bacterial stains, particularly in the case of the direct study of microorganisms in soil. The writers have made a further investigation of these two dyes and others of the same group (thirteen in all) to determine their relative merits for this purpose. It is found that practically all the deeper colored dyes of the group stain bacteria in pure culture satisfactorily; but that in the case of soil infusions some of the dyes have such an affinity for the dead organic matter as to obscure the bacteria present. Best results in the present work were obtained with rose bengal B; but it is pointed out that good staining effects may be obtained with the phloxines and erythrosins. The behavior of any one of these dyes when applied to a soil preparation varies according to the reaction of the material stained; and this is mentioned as a possible explanation as to why others have found better results with erythrosin than with rose bengal.     

Mechanisms involved in the chemical inhibition of the eosin-sensitized photooxidation of trypsin

A large series of compounds was screened for ability to protect trypsin from eosin-sensitized photodynamic inactivation. Eosin-sensitized photooxidation reactions of this type typically proceed via the triplet state of the dye and often involve singlet state oxygen as the oxidizing entity. In order to determine the mechanisms by which trypsin is protected from photoinactivation, a number of good protective agents (inhibitors) and some non-protective agents were selected for more detailed flash photolysis studies. Good inhibitors such as p-phenylenediamine, n-propyl gallate, serotonin creatinine sulfate and p-toluenediamine competed efficiently with oxygen and with trypsin for reaction with the triplet state of eosin. The inhibitors were shown to quench triplet eosin to the ground state and/or reduce triplet eosin to form the semireduced eosin radical and an oxidized form of the inhibitor. In the latter case, oxidized inhibitor could react by a reverse electron transfer reaction with the semi-reduced eosin radical to regenerate ground state eosin and the inhibitor. The good inhibitors also competed effectively with trypsin for oxidation by semioxidized eosin, thus giving another possible protective mechanism. Non-inhibitors such as halogen ions and the paramagnetic ions Co++, Cu++ and Mn++ reacted only slowly with triplet and with seimioxidized eosin. The primary pathway for the eosin-sensitized photooxidation of trypsin at pH 8.0 involved singlet oxygen, although semioxidized eosin may also participate.     

Inactivation of Neurospora crassa conidia by singlet molecular oxygen generated by a photosensitized reaction.

Photodynamic damage of Neurospora crassa conidia was studied in the presence of the photosensitizing dye, toluidine blue O. Conidia which germinated to form colonies decreased in number as irradiation time became longer. The photoinactivation of conidia was suppressed by azide, bovine serum albumin, and histidine, and was stimulated in deuterium oxide. Wild-type conidia were less sensitive to the irradiation than albino conidia. In the wild-type, carotenoid-enriched conidia were more resistant against the lethal damage than the conidia which contained small amounts of carotenoids. These results suggest that singlet molecular oxygen causes photodynamic lethal damage to N. crassa conidia and that singlet molecular oxygen is quenched by endogenous carotenoids.     

The effect of biological sulfate reduction on anaerobic color removal in anaerobic–aerobic sequencing batch reactors

Combination of anaerobic–aerobic sequencing processes result in both anaerobic color removal and aerobic aromatic amine removal during the treatment of dye-containing wastewaters. The aim of the present study was to gain more insight into the competitive biochemical reactions between sulfate and azo dye in the presence of glucose as electron donor source. For this aim, anaerobic–aerobic sequencing batch reactor fed with a simulated textile effluent including Remazol Brilliant Violet 5R (RBV 5R) azo dye was operated with a total cycle time of 12 h including anaerobic (6 h) and aerobic cycles (6 h). Microorganism grown under anaerobic phase of the reactor was exposed to different amounts of competitive electron acceptor (sulfate). Performance of the anaerobic phase was determined by monitoring color removal efficiency, oxidation reduction potential, color removal rate, chemical oxygen demand (COD), color, specific anaerobic enzyme (azo reductase) and aerobic enzyme (catechol 1,2-dioxygenase), and formation of aromatic amines. The presence of sulfate was not found to significantly affect dye decolorization. Sulfate and azo dye reductions took place simultaneously in all operational conditions and increase in the sulfate concentration generally stimulated the reduction of RBV 5R. However, sulfate accumulation under anaerobic conditions was observed proportional to increasing sulfate concentration.