History of the zoocenosis of Lake Glubokoe according to animal remains in the bottom sediments

The remains of all the groups of invertebrates in a 131 cm long sediment core taken from the main basin of the lake and corresponding to about 600 years have been examined and counted. The middle horizons (90–40 cm) are dominated by Testacida. Deeper layers and those closer to the surface are dominated by Cladocera. Among the Cladocera, planktonic forms dominate at all depths of the sediment. The present zoocenosis has existed for about 400 years. A 50 cm core from the lake bay has also been studied. Cladocera dominate at 50–40 cm and near the surface. Porifera spicules are abundant at 20–10 cm while Protozoa are numerous at 30 cm. Among the Cladocera, planktonic forms are less important than in the main lake basin.     

The results of hydroacoustic observations on roach in Lake Glubokoe in winter

This paper describes under-ice observations on the diurnal dynamics of the distribution and behaviour of roach in Lake Glubokoe in March, 1983, and in March, 1984. It presents data on the reactions of fish to external stimuli. Some factors influencing the distribution of fish in the winter period are discussed.     

Ecological background and importance of the change of chironomid fauna (Diptera: Chironomidae) in shallow Lake Balaton

The objectives of this research were to record the changes in composition of the open-water, bottom-dwelling chironomid fauna in Lake Balaton between 1978–1984, to examine the causes of these changes, and to discover their significance in the life of the lake.The spatio-temporal dispersion of larvae is compared with the water and sediment quality of each basin in the lake. It is established that, under present conditions, nutrient status can be regarded as the chief environmental factor.Studies of population dynamics show that chironomids play a highly important role in preserving sediment quality. Chironomids are an essential element in the organic matter circulation of the lake. They dominate a sub-system that retards water quality degradation, and thus they play a prominent role in the natural prevention of eutrophication.     

Dissolved organic carbon and fluorescence in Lake Hovsgol: factors reducing humic content of the lake water

 Lake Hovsgol is a large tectonic lake located in northern Mongolia, which has extremely transparent lake water. In our survey, the dissolved organic carbon of the lake water was 80–100 μM-C, and the fluorescence intensity in an excitation and emission matrix was very low. The brown color and high content of humic substances in river water flowing from a watershed consisting of grassland and forests rapidly declined in the coastal area of the lake. The decrease in humic content may be due not only to dilution by the lake water but also to flocculation and photobleaching. Among tectonic lakes in Asia, Lake Hovsgol would appear to have unique biological and hydrological features that reduce humic content and help to maintain water transparency. Received: June 25, 2002 / Accepted: January 10, 2003 Acknowledgments The authors acknowledge helpful discussion with Dr. J. Urabe. We thank Dr. T. Galbaatar, Mongolian Academy of Science, Mongolia, for his arrangements on the expeditions in 1999. We are also indebted to Mr. D. Hadbaatar, B. Ganbat, and the cruise staff of the R/V Suchbaatar for their assistance in the course of the study. This study was supported by Grant-in-Aid No. 09041159 and 13575034 for Scientific Research from the Ministry of Education, Culture, Sports, Science and Technology of Japan. Correspondence to:K. Hayakawa     

Fluorescence spectroscopic characterization of dissolved organic matter in the waters of Lake Fuxian and adjacent rivers in Yunnan,China

The fluorescence properties of dissolved organic matter (DOM) in the water of Lake Fuxian and its adjacent rivers on the Yunnan Plateau, southwestern China, were studied to specify the characterization of DOM in the lake and river waters. The fluorescence properties with the excitation–emission matrix in the water of Lake Fuxian are different from those in the river water. The differences in these properties between the lake and river water could arise not only from their sources but also from the reactivity of the photobleaching of DOM. In the lake, the supplying of allochthonous fluorescent materials from inflowing rivers to the fluorescent DOM is less significant than the photobleaching of fluorescent substances.     

Temporal and spatial distributions of dissolved organic carbon and nitrogen in two small lakes on the Southwestern China Plateau

Temporal and spatial distributions of dissolved organic carbon (DOC), dissolved organic nitrogen (DON), chlorophyll-a and inorganic nitrogen were investigated in two small mountainous lakes (Lake Hongfeng and Baihua), on the Southwestern China Plateau, based on almost 2 years’ field observation. DOC concentrations ranged from 163 μM to 248 μM in Lake Hongfeng and from 143 μM to 308 μM in Lake Baihua, respectively, during the study period. DON concentrations ranged from 7 μM to 26 μM in Lake Hongfeng and from 14 μM to 47 μM in Lake Baihua. DOC showed vertical heterogeneity with higher concentrations in the epilimnion than in the hypolimnion during the stratification period. The DON concentration profiles appeared to be more variable than the DOC profiles. Apparent DON maxima occurred in the upper layer of water. In Lake Hongfeng, DOC concentration in the surface water was highest at the end of spring and early summer. DON concentration was 2–5 μM higher in May 2003 and in June 2004 than in adjacent months. DOC and chlorophyll-a concentrations were significantly correlated (r = 0.79, P < 0.05). The period of highest concentrations of DOC in Lake Hongfeng was also the season of concentrated rainfall. Algae activity and allochthonous input might result in an increase of DOC and DON concentrations together. In Lake Baihua, the maximum concentrations of DOC and DON in the surface water occurred simultaneously in May 2003 and February 2004. DOC concentrations were significantly correlated with DON (r = 0.90, P < 0.01), indicating the common sources. Allochthonous input, biological processes, stratification and mixing were the most important factors controlling the distributions and cycling of dissolved organic matter (DOM) and inorganic nitrogen in these two lakes. Inference from the corresponding vertical distributions of DOM and inorganic nitrogen indicated that DOM played potential roles in the internal loading of nitrogen and metabolism in the water body in these small lakes. The carbon/nitrogen (C/N) ratio showed a potential significance for tracing the source and biogeochemical processes of DOM in the lakes. These results are of significance in the further understanding of biogeochemical cycling and environmental effects of DOM and nitrogen in lake ecosystems.     

Effect of different levels of water salinity on the decomposition of organic manures in a brackish water fish pond soil

Effects of different water salinity levels on the decomposition of the two organic manures cowdung and poultry manure were studied under laboratory condition. Application of the manures increased the free CO₂ content and decreased D.O. levels of water. pH values of soil and water declined slightly on addition of the manures. The amount of nitrogen, released from the organic manures to water and soil phases, increased gradually with the period of incubation but decreased with increase in water salinity levels. NH₄⁺ was found to occur in comparatively higher amount than NO₃^–, due to prevailing anaerobic environmental conditions. The amount of added organic carbon remaining in the soil decreased gradually as the decomposition proceeded, but recorded slightly higher values with increase in water salinity levels.The results showed that the rates of decomposition of added organic manures were comparatively lower under higher water salinity levels and hence indicated that use of well decomposed manures might be more suitable for use under such water salinities in brackish water fish ponds.This work formed a part of a thesis submitted for the Degree of Doctor of Philosophy to Bidhan Chandra Agricultural University, West Bengal in 1978This work formed a part of a thesis submitted for the Degree of Doctor of Philosophy to Bidhan Chandra Agricultural University, West Bengal in 1978     

Effects of the different levels of dietary trace elements from organic or inorganic sources on growth performance,carcass traits,meat quality,and faecal mineral excretion of broilers

ABSTRACT

This experiment was conducted to evaluate the effects of different sources and levels of trace elements on growth performance, carcass composition and mineral excretion levels of broilers. In a completely randomised experimental design, 900 one-day-old male Ross-308 broilers were assigned to 5 treatments, with 6 replicates of 30 birds each. The control group (CITE) was fed with a basal diet containing regular inclusion levels of inorganic trace elements. Treatment groups were supplied with reduced levels (30% and 50% of the regular level) of inorganic (ITE) or organic trace elements (OTE), respectively. Groups 50% ITE, 30% OTE and 50% OTE diets had equivalent average daily gain (ADG), average daily feed intake (ADFI), feed to gain ratio (F/G ratio) and mortality rate compared with group CITE in any phase. However, compared with group CITE chicks in group 30% ITE have lower ADG and ADFI and higher F/G ratio. The carcass yields were not affected by dietary treatments. Compared with group CITE, in groups 30% ITE, 50% ITE, 30% OTE and 50% OTE the shear force values of the breast muscle were only 71.8%, 83.4%, 63.5% and 59.4% (p < 0.05), respectively. Birds received diets containing reduced levels of trace elements had diminished excretions of Mn and Zn throughout the entire period (p < 0.01). In conclusion, the reduced supplementation of trace elements had no or slightly negative impact on growth performance, carcass yield and meat quality, but decreased faecal mineral excretion. Moreover, the trace element supply as OTE played a limited role on performance and excretion and was only partly beneficial for animal performance in case the trace element supply was reduced to 30%.     

The Classification and the Monitoring of the State of Mouth Riverine and Lacustrine Ecosystems in Lake Baikal Based on the Composition of Local Microbiocenoses and Their Activity

The paper presents the results of the long-term investigation of microbial communities in the technogenically vulnerable mouth riverine and lacustrine ecosystems of Lake Baikal. The structural and functional parameters of the microbial communities were analyzed from the standpoint of developing destructive processes. The analysis showed that the total number of microorganisms (TNM), the number of saprophytic bacteria (NSB), and bacterial production (BP) were greater in the river-mouth water than in the near-mouth lake water. In the offshore direction, TNM and NSB decreased by a factor of 1.5 to 2, and BP decreased by a factor of 4 to 7. Based on TNM, NSB, and BP data, we classified the Lake Baikal rivers with respect to the degree of the impact of human activities on them. The degrading capability of the riverine microbial communities was found to be such that they degrade daily from tenths of a percent to 3.5% of the total amount of organic compounds polluting the river waters.     

The influence of organic substrates and inhibitors on the induction of a respiratory oscillation in the cyanobacterium Anacystis nidulans

The rate of respiratory oxygen uptake of the cyanobacterium (blue-green alga) Anacystis nidulans oscillated under certain physiological conditions after light pulses or after addition of sodium acetate. The oscillation started either by the photosynthetic inhibition of respiration or by the stimulation of oxygen uptake caused by sodium acetate. The photosynthetic inhibition of respiration decreased the rate of oxygen uptake to about 20% of the rate in the dark.Starved cells (48 h dark) had lost the inducibility of the oscillation. In starved as well as in non-starved cells oscillations were inducible in the presence of fructose or glucose. Well developed oscillations were not promoted further. All other substances tested as substrates did not restore the inducibility of the oscillation in starved cells. The induction of the oscillation was inhibited by iodoacetamide (0.1 mM), p-hydroxymercuribenzoate (0.1 mM) and sodium fluoride (100 mM). It is suggested that a flow from glyceraldehyde-3-phosphate to the incomplete tricarboxylic acid cycle is a prerequisite for the oscillation.     

Density dynamics of the larvae ofMytilus trossulus mussels in plankton and their settling on collectors in Vostok Bay, Sea of japan

This paper presents the results of the analysis of density dynamics of the larvae of the Pacific mussel in plankton, and experimental data on their settling on collectors in Vostok Bay, Sea of Japan, obtained in May–September 1989. It was found that, in the summer-autumn season, complex demographic processes occur on the suspended anthropogenic substrata. These processes are caused by the primary settling of pelagic larvae and by the secondary settling of juvenile mussels.     

O-glycosylhydrolases of embryos of the sea urchin <Emphasis Type="Italic">Strongylocentrotus intermedius</Emphasis> and effect of some natural substances on their biosynthesis

Embryos of the sea urchin Strongylocentrotus intermedius have been found to contain o-glycosyl hydrolases: highly active 1,3-β-D-glucanase and β-D-mannosidase as well as a lower activity of β-D-glucosidase and β-D-galactosidase. Dynamics of changes of the enzyme activities has been studied at various stages of the sea urchin development. There has also been studied effects of some substances (natural fucoidans, β-1.3; 1.6-glucans formed by enzymatic synthesis as well as protein inhibitor of marine mollusc endo-1,3-β-D-glucanases) on development of the embryos and biosynthesis of 1,3-β-D-glucanase and α-D-mannosidase.     

Effects of a dietary organic acid mixture and of dietary fibre levels on ileal and faecal nutrient apparent digestibility, bacterial nitrogen flow, microbial metabolite concentrations and rate of passage in the digestive tract of pigs

Six 34-kg barrows were fitted with a post-valve T-caecum cannula and assigned to six dietary treatments according to a 6 × 5 change-over design to study how a mixture of formic acid, sorbate, and benzoate (0 or 8.4 g/kg feed) influences apparent ileal and faecal digestibility coefficients, bacterial nitrogen (N) flow, microbial metabolite concentrations, and passage rate in pigs fed isoenergetic diets with medium, high, or very high fibre content (neutral-detergent fibre (NDF): 199, 224, and 248 g/kg dry matter, respectively). These barley and soya-bean meal based diets contained 0, 75, and 150 g/kg barley fibre (NDF: 577 g/kg) and 0, 8, and 16 g/kg rapeseed oil, respectively. The dietary organic acid mixture improved the apparent ileal digestibility of 14 of the 17 amino acids analysed (P < 0.05). Increasing levels of dietary fibre linearly decreased the apparent ileal digestibility of six of the 17 amino acids analysed (P < 0.05). Ileal flows of bacterial N and amino acids as assessed on the basis of purine flow were decreased by the dietary organic acid mixture (P < 0.05) but were not affected by dietary fibre level (P>0.05). As assessed on the basis of diaminopimelic acid flow, bacterial N flow was increased by both the dietary organic acid mixture and increased dietary fibre levels (P < 0.05). The dietary organic acid mixture reduced the concentration of lactic acid and increased that of acetic acid in ileal digesta (P < 0.05), while dietary fibre levels had a quadratic effect on concentrations of acetic, propionic, and butyric acid (P < 0.05). The mean retention time of Co (solute marker) and Yb (particle marker) in the large intestine decreased in a linear manner by increasing dietary fibre levels (P < 0.05) but was not affected by the dietary organic acid mixture (P>0.05). The results show that a dietary organic acid mixture has a positive effect on the apparent ileal digestibility of most amino acids irrespective of dietary fibre levels. This could be at least partly related to changes in bacterial N flow in the ileum. However, different bacterial markers showed opposite effects on bacterial N flow, which makes it questionable to use a constant bacterial marker / bacterial N ratio to estimate bacterial N flow. Increasing levels of dietary fibre had negative effects on the apparent ileal amino acid digestibilities and shortened the mean retention time of digesta in the large intestine.     

The role of hydrophobic /hydrophilic balance in the activity of structurally flexible vs. rigid cytolytic polypeptides and analogs developed on their basis

ABSTRACT

Introduction: Being important representatives of various proteomes, membrane-active cationic peptides (CPs) are attractive objects as lead compounds in the design of new antibacterial, anticancer, antifungal, and antiviral molecules. Numerous CPs are found in insect and snake venoms, where many of them reveal cytolytic properties. Due to advances in omics technologies, the number of such peptides is growing dramatically.

Areas covered: To understand structure–function relationships for CPs in a living cell, detailed analysis of their hydrophobic/hydrophilic properties is indispensable. We consider two structural classes of membrane-active CPs: latarcins (Ltc) from spider and cardiotoxins (CTXs) from snake venoms. While the former are void off disulfide bonds and conformationally flexible, the latter are structurally rigid and cross-linked with disulfide bonds. In order to elucidate structure–activity relationships behind their antibacterial, anticancer, and hemolytic effects, the properties of these polypeptides are considered on a side-by-side basis.

Expert commentary: An ever-increasing number of venom-derived membrane-active polypeptides require new methods for identification of their functional propensities and sequence-based design of novel pharmacological substances. We address these issues considering a number of the designed peptides, based either on Ltc or CTX sequences. Experimental and computer modeling techniques required for these purposes are delineated.     

The effects of organic solvents on the efficiency and regioselectivity of N‐acetyl‐lactosamine synthesis,using the β‐galactosidase from Bacillus circulans in hydro‐organic media

The enzymatic synthesis of N‐acetyl‐lactosamine (LacNAc) by the transgalactosylation of N‐acetyl‐D ‐glucosamine (GlcNAc), catalyzed by the β‐galactosidase from Bacillus circulans (BcβGal), was studied in hydro‐organic media, starting from o‐nitrophenyl‐β‐D ‐galactopyranoside (oNPG) as a galactosyl donor. Thermal stability and synthesis activity of BcβGal were shown to depend on the organic solvent polarity, characterized by its Log P value. BcβGal was thus most stable in 10% (v/v) t‐BuOH, an organic solvent found to have a stabilizing and/or weakly denaturing property, which was confirmed for high t‐BuOH concentrations. In the same manner, the optimal synthesis yield increased as the Log P value of the organic solvent increased. The best results were obtained for reactions carried out in 10% (v/v) pyridine or 2‐methyl‐2‐butanol, which gave 47% GlcNAc transgalactosylation yield based on starting oNPG, of which 23% (11 mM; 4.3 g/L) consisted in LacNAc synthesis. Furthermore, it was also established that both the GlcNAc transgalactosylation yield and the enzyme regioselectivity depended on the percentage of organic solvent used, the optimal percentage varying from 10 to 40% (v/v), depending on the solvent. This phenomenon was found to correlate mainly with the thermodynamic activity of water (a_w) in the aqueous organic solvent mixture, which was found to be optimal when close to 0.96, whatever the organic solvent used. Finally, this study highlighted the fact that the regioselectivity of BcβGal for 1‐4 linkage formation could be advantageously managed by controlling the a_w parameter. © 2010 American Institute of Chemical Engineers Biotechnol. Prog., 2010     

Screening for the selective inhibitors of MMP-9 from natural products based on pharmacophore modeling and molecular docking in combination with bioassay experiment,hybrid QM/MM calculation,and MD simulation

Matrix metalloproteinase-9 (MMP-9) has been considered as an attractive target involving cancer therapy. In this study, the 3D QSAR pharmacophore model of MMP-9 inhibitors is built, and its reliability is subsequently validated based on different methods. The built pharmacophore model consists of the four chemical features, including two hydrogen bond acceptors (HBA), one hydrophobic (HY), and one ring aromatic (RA). Among them, both HY and RA are found to be especially important features because they involve the interactions of inhibitors with the S1′ pocket of MMP-9, which determines the selectivity of MMP-9 inhibitors. By combining pharmacophore model with molecular docking, the virtual screening is carried out to identify the selective MMP-9 inhibitors from natural products. The four potential selective MMP-9 inhibitors of natural products are found. One of them was used to carry out the bioassay experiment inhibiting MMP-9, and the estimated IC₅₀ value of only 26.94 µM clearly shows its strongly inhibitory activity; besides, both the hybrid quantum mechanics/molecular mechanics (QM/MM) calculation and the molecular dynamics simulation are performed to examine the reliability regarding the binding mode of this inhibitor with MMP-9 active sites predicted by molecular docking. All the screened four natural products are found to well bind with the MMP-9 active sites by different kinds of interactions. Finally, the ADMET properties of screened four natural products are assessed. These screened MMP-9 inhibitors of natural products could be used as the lead compounds to perform structural modifications and optimizations in the future work.

Communicated by Ramaswamy H. Sarma