Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume

The Deepwater Horizon oil spill in the Gulf of Mexico is the deepest and largest offshore spill in the United State history and its impacts on marine ecosystems are largely unknown. Here, we showed that the microbial community functional composition and structure were dramatically altered in a deep-sea oil plume resulting from the spill. A variety of metabolic genes involved in both aerobic and anaerobic hydrocarbon degradation were highly enriched in the plume compared with outside the plume, indicating a great potential for intrinsic bioremediation or natural attenuation in the deep sea. Various other microbial functional genes that are relevant to carbon, nitrogen, phosphorus, sulfur and iron cycling, metal resistance and bacteriophage replication were also enriched in the plume. Together, these results suggest that the indigenous marine microbial communities could have a significant role in biodegradation of oil spills in deep-sea environments.     

Observations on the distribution of meroplankton during a downwelling event and associated intrusion of the Chesapeake Bay estuarine plume

We investigated the dispersal of larvae of benthic invertebratesand tested the hypothesis that larvae behaved as if they werepassive particles. Observations were made off Duck, North Carolina,USA during a period of wind driven downwelling at the coastand an intrusion of estuarine water from the Chesapeake Bay.The plume of estuarine water (salinity < 30 psu) was strongestat the shoreward stations in the more northern transects. Winddriven shoreward surface flow converged at the seaward edgeof the plume and downwelled. Offshore flow was present belowthe thermocline and caused the thermocline to bend downwardand contact the bottom at between 5 and 10 km offshore. In the zooplankton samples, we enumerated 33 taxa of larvae(17 taxa of bivalve veligers, 10 taxa of gastropod veligers,and 6 taxa of polychaete larvae). Using cluster analysis, larvaewere separated into groups with similar patterns of distribution.If larvae were acting as passive particles then we hypothesizedthat: 1) Their distribution should remain tied to a water massand 2) around a convergence or divergence, there should be nochange in larval concentration. The distributions of larvaein Clusters 1, 4, 5, and 6 were consistent with the hypothesisthat they were acting as passive particles. Larvae in Clusters2 and 3, however, did not appear to be acting as passive particles.Larvae in Cluster 2 did not remain tied to a water mass. Theyentered the study area in the estuarine plume waters, but within20 km they were nearly absent from the plume water and werefound seaward of the plume and at greater depth. Larvae in Cluster3 were most abundant in areas of converging currents where theshoreward flowing surface waters downwelled at the plume frontor against the shore. We hypothesized that larvae of organisms which as adults livein the intertidal or shallow subtidal zones would have morenearshore distributions than the larvae of adults that are broadlydistributed across the shelf. We compared the depth of the habitatof the adult bivalves from which the bivalve larvae in the differentclusters were derived. The results were consistent with thehypothesis; larvae with distributions closer to shore tendedto come from adults found at shallower depths or in the intertidalzone.     

Ocean circulation and terrestrial runoff dynamics in the Mesoamerican region from spectral optimization of SeaWiFS data and a high resolution simulation

The evolution in time and space of terrestrial runoff in waters of the Mesoamerican region was examined using remote sensing techniques combined with river discharge and numerical ocean circulation models. Ocean color SeaWiFS images were processed using a new Spectral Optimization Algorithm for atmospheric correction and ocean property retrieval in Case-2 waters. A total of 157 SeaWiFS images were collected between 1997 and 2006 and processed to produce Colored Detrital Material images of the Mesoamerican waters. Monthly terrestrial runoff load and river discharge computed with a land-elevation model were used as input to a numerical model, which simulated the transport of buoyant matter from terrestrial runoff. Based on land cover for years 2003–2004, modeling results showed that the river discharge seasonality was correlated with the image averaged CDM, and the simulated plume reproduces the spatial patterns and temporal evolution of the observed CDM plume. River discharge peaked in August and CDM peaked from September to January. The buoyant matter concentration was high from October to January, and was at its lowest from March to April. Between October and December the plume was transported out of the Mesoamerican waters by a cyclonic gyre located north of Honduras. Part of the runoff from Honduras was transported towards Chinchorro Banks and the Yucatan Channel, part re-circulated into the Gulf of Honduras, and part taken toward the outside of the Mesoamerican Barrier Reef System. This study shows that all the reefs of the MBRS, including the most offshore atolls of the region, are under the influence of terrestrial runoff on a seasonal basis, with maximum effect during October to January, and minimum from March to April. Furthermore, what is seen as a giant plume in satellite images is in fact composed of runoffs of different ages.     

Tracing estuarine organic matter sources into the southern North Sea using C and N isotopic signatures

Sources and distribution of particulate organic matter in surface waters of the Humber and Thames estuaries and in the East Anglian plume in the southern North Sea were investigated in winter 2006/2007. Carbon (C) and nitrogen (N) stable isotopes provided evidence for the presence of three particulate organic matter sources; riverine plankton (δ¹³C ?30 ‰ and δ¹⁵N 7.9 ‰) identified in the Thames estuary only, marine plankton (average δ¹³C ?21.4 ‰ and δ¹⁵N 4.5 ‰) and a third source with an enriched ¹³C signature (>?16.7 ‰) and elevated C:N ratio (>12.7). Particulate organic matter with enriched ¹³C values were observed throughout the Humber estuary and at the marine end-member of the Thames estuary. While bacterial cycling of organic carbon undoubtedly takes place within these estuaries, these processes on their own are unlikely to account for the isotopic signatures seen. The ¹³C enriched organic matter source is suggested to be due to particulate organic matter input from marsh plants and seagrasses such as Spartina spp. and Zostera on the adjacent salt marshes and mudflats and/or macroalgae along the banks of the estuaries. This ¹³C enriched signal was also identified approximately 50 km offshore within the southern North Sea, in the East Anglian plume, which transports UK riverine water off-shore in a discrete plume. This plume therefore provides a mechanism to transport this estuarine derived organic matter pool offshore out of the estuaries. These results indicate that estuarine derived organic matter from marsh plants, seagrasses and/or macroalgae contributes to the southern North Sea organic matter pool and is therefore likely to contribute to winter-time shelf sea carbon and nitrogen cycles.     

The influence of coastal upwelling on the distribution of Calanus chilensis in the Mejillones Peninsula (northern Chile): implications for its population dynamics

A field experiment was carried out in October 1998 during active upwelling in a coastal area off the Mejillones Peninsula (23° S). Zooplankton was sampled at day and night, during two subsequent days at 4 stations inside and outside of the upwelling plume. Three depth strata were sampled: 0–20 m, 20–80 m and 80–200 m. Oceanographic data were obtained in a grid of 23 stations using a CTDO, a fluorometer and a Doppler current meter. Calanus chilensis was mostly represented by late stages, i.e. copepodid C5 and adult males and females. There were no day/night effects on vertical distribution, and abundance was significantly higher inside the upwelling plume in the upper 20-m layer at nearly 14 ind. m^–3, compared to ca. 5 ind. m^–3 outside the upwelling plume. Temperature at 10 m depth and biomass, estimated from stage numbers and their mean dry weights, were used to estimate growth and daily production of Calanus at temperature-dependent rates. The potential loss of biomass from the upwelling center because of advection in the upwelling plume was estimated from current data in the Ekman layer and biomass density. The mean cross-shelf component of the current was estimated at 10.4 km d^–1 within the upwelling plume. This yielded a loss of biomass of 9.7 mg dry weight m^–2 . Production, estimated by a temperature-dependent approach, ranged between 44 and 35 mg dry weight m^–2 d^–1, at mean temperatures of 14.6 °C and 15.8 °C inside and outside of the upwelling plume respectively. Within the plume, as much as 22% of daily production may be advected offshore. However, a higher concentration of biomass in the upwelling plume allowed a greater production compared to surrounding areas. A mass balance approach suggests that advective losses may not have a major impact on the C. chilensis population, because of very high daily production at temperature-dependent rates.     

An extensive Cochlodinium bloom along the western coast of Palawan, Philippines

A massive fish kill and water discoloration were reported off the western coast of Puerto Princesa, Palawan, Philippines in March 2005. Phytoplankton analysis revealed a near monospecific bloom of the dinoflagellate, Cochlodinium polykrikoides, with cell concentrations ranging from 2.5 × 10⁵ to 3.2 × 10⁶ cells per liter. Ground truth data were supplemented by processed satellite images from MODIS Aqua Level 2 data (1 km resolution) from January to April 2005, which revealed high surface chlorophyll-a levels (up to 50 mg/m³) offshore of west and southwest Palawan as early as February 2005. The bloom extended 310 km in length and 80 km in width at its peak in March off the central coast (Puerto Princesa). By April, the bloom declined in intensity, but was still apparent along the northern coast (El Nido). Fluctuations in chlorophyll levels off the western coast of Sabah, Malaysia and Brunei during this time period suggested that the bloom was not limited to the coast of Palawan. Satellite imagery from Sabah in late January revealed a plume of chl-a that is believed to be the source of the C. polykrikoides bloom in Palawan. This plume drifted offshore, advected northward via the basin-wide counterclockwise gyre, and reached nutrient-rich, upwelled waters near Palawan (due to a positive wind stress curl) where the dinoflagellate bloomed and persisted for 2 months from March to April 2005.     

Flood Impacts in Keppel Bay,Southern Great Barrier Reef in the Aftermath of Cyclonic Rainfall

In December 2010, the highest recorded Queensland rainfall associated with Tropical Cyclone ‘Tasha’ caused flooding of the Fitzroy River in Queensland, Australia. A massive flood plume inundated coral reefs lying 12 km offshore of the Central Queensland coast near Yeppoon and caused 40–100% mortality to coral fringing many of the islands of Keppel Bay down to a depth of ∼8 m. The severity of coral mortality was influenced by the level of exposure to low salinity seawater as a result of the reef''s distance from the flood plume and to a lesser extent, water depth and whether or not the reef faced the plume source. There was no evidence in this study of mortality resulting from pollutants derived from the nearby Fitzroy Catchment, at least in the short term, suggesting that during a major flood, the impact of low salinity on corals outweighs that of pollutants. Recovery of the reefs in Keppel Bay from the 2010/2011 Fitzroy River flood is likely to take 10–15 years based on historical recovery periods from a similar event in 1991; potentially impacting visitor numbers for tourism and recreational usage. In the meantime, activities like snorkeling, diving and coral viewing will be focused on the few shallow reefs that survived the flood, placing even further pressure on their recovery. Reef regeneration, restoration and rehabilitation are measures that may be needed to support tourism in the short term. However, predictions of a warming climate, lower rainfall and higher intensity summer rain events in the Central and Coastal regions of Australia over the next decade, combined with the current anthropogenic influences on water quality, are likely to slow regeneration with consequent impact on long-term reef resilience.     

Ascertaining the Effect of Reductive Dehalogenation on Chlorinated Hydrocarbon Plume Lengths in Groundwater: Analyses of Multisite Data

Chlorinated hydrocarbon groundwater plume data from a multisite study were evaluated by a variety of statistical techniques (correlation, analysis of covariance, principal components) to quantify the effects of biotransformations (reductive dehalogenation) on plume length. After accounting for the effects of groundwater velocity, source strength, and biases in the data collection process, chlorinated hydrocarbon plume lengths at sites where reductive dehalogenation was occurring were found to be significantly shorter on average, by roughly a factor of two, than those where it was not. Moreover, principal component analyses indicated significant differences in the behavior of chlorinated hydrocarbon plumes between sites with and without evidence of reductive dehalogenation, respectively. The advantage in examining plume behavior from this population-oriented perspective is that overall trends in plume behavior can be evaluated despite site-specific influences such as heterogeneities and unique release histories. Ultimately, it is these average trends that would be of the most interest to policymakers because they represent the ranges of conditions that will be encountered. This is especially important in the case of chlorinated hydrocarbons because they will biotransform at rates significant for appreciable natural attenuation only in certain instances.     

Distribution of Microbial Physiologic Types in an Aquifer Contaminated by Crude Oil

Abstract We conducted a plume-scale study of the microbial ecology in the anaerobic portion of an aquifer contaminated by crude-oil compounds. The data provide insight into the patterns of ecological succession, microbial nutrient demands, and the relative importance of free-living versus attached microbial populations. The most probable number (MPN) method was used to characterize the spatial distribution of six physiologic types: aerobes, denitrifiers, iron-reducers, heterotrophic fermenters, sulfate-reducers, and methanogens. Both free-living and attached numbers were determined over a broad cross-section of the aquifer extending horizontally from the source of the plume at a nonaqueous oil body to 66 m downgradient, and vertically from above the water table to the base of the plume below the water table. Point samples from widely spaced locations were combined with three closely spaced vertical profiles to create a map of physiologic zones for a cross-section of the plume. Although some estimates suggest that less than 1% of the subsurface microbial population can be grown in laboratory cultures, the MPN results presented here provide a comprehensive qualitative picture of the microbial ecology at the plume scale. Areas in the plume that are evolving from iron-reducing to methanogenic conditions are clearly delineated and generally occupy 25–50% of the plume thickness. Lower microbial numbers below the water table compared to the unsaturated zone suggest that nutrient limitations may be important in limiting growth in the saturated zone. Finally, the data indicate that an average of 15% of the total population is suspended. Received: 28 October 1998; Accepted: 26 February 1999     

An analysis of anemotactic flight in female moths stimulated by host odour and comparison with the males' response to sex pheromone

ABSTRACT. The flight pattern of mated female navel orangeworm moths, Amyelois transitella (Walker), responding to odour from potential larval hosts is zigzagging upwind flight. However, at times these moths are capable of flying nearly directly upwind towards the odour source (track angles near 0). This response indicates that these females are capable of very accurate anemotactic control of their heading or course angle, since small angular errors in this measure would translate into larger deviations from direct upwind flight. Males of this species exhibit flight patterns similar to those of females, including track angles clustered about 0 when flying upwind to a source of the female-produced pheromone, but under these experimental conditions they flew with a higher average airspeed than the females. When females lose contact with an odour plume they initiate a well-defined programme of cross-wind counterturning or casting, which may normally increase their chances of retrieving contact with that plume when the wind direction shifts. The resultant track angles of females increase significantly by 0.8 s after plume loss, indicating that the female has initiated changes in both her course angle and airspeed. By 1 s after plume loss the females' track angles are no longer unimodally distributed about 0, but are bimodally distributed about -90 and +90. Males responded more rapidly to the loss of a pheromone plume, demonstrating a significant change in track angle 0.4 s after plume loss. Overall, female and male A.transitella exhibited remarkably similar anemotactic flight manoeuvres during upwind flight to odour sources as well as after plume loss.     

Space charge drift from a +/- 400-kV direct current transmission line

The Minnesota Environmental Quality Board completed a 3-year study of the space charge plume outside the right of way of a bipolar (+/- 400 kV) direct current transmission line in rural west central Minnesota. The purpose of the study was to determine the levels of DC potential gradient and small airs ions in the downwind plume to which humans and animals may be exposed. Potential gradient measurements show that a space charge plume is detectable downwind at least 1600 m from the transmission line. Plume relaxation rates indicate that under certain conditions one could detect the plume at twice that distance or more. Net charge in the plume assumes the polarity of the downwind energized transmission line conductor. The bipolar DC line thus electrically bisects the land through which it passes; on one side of the line there is a net positive space charge, on the other side a net negative space charge. Electric charge in the plume resides on aerosols and small air ions. Polar conductivity data substantiate the fact that small air ions of one polarity in the plume are elevated while those of opposite polarity are suppressed compared to background concentrations found in the rural environment. The resulting charge imbalance persists downwind at least 1600 m, though the median small air ion concentrations of plume polarity have adjusted to within the background range by that time with perpendicular wind speed components between 1 and 6 m/sec.     

A springtime source of toxic Pseudo-nitzschia cells on razor clam beaches in the Pacific Northwest

Concentrations of domoic acid (DA) above the regulatory limit in Washington coast razor clams are usually higher on northern beaches from summer to fall. Recent field studies have confirmed that the primary source of toxic Pseudo-nitzschia (PN) cells in those seasons is a semi-retentive topographically trapped seasonal eddy located offshore and north of the clamming beaches. Another semi-retentive coastal feature, Heceta Bank, that has been shown to support toxic PN cells in summer, is located south of Washington's clamming beaches. In this paper we present evidence to demonstrate that Heceta Bank, although not a likely source of toxic cells to Washington in summer due to the prevailing southward seasonal currents, may be a source of cells in springtime before the southward currents develop. In contrast to summer and fall seasons, concentrations of DA in razor clams are typically higher at southern beaches in spring. The likelihood of a southern source is explored using biological and transport data surrounding a period of toxic razor clams in April 2005. In particular, satellite-derived chlorophyll data confirm that a bloom occurred over Heceta Bank in March of that year, just prior to a period of strong storm-driven northward transport. PN cells of the same species observed in the April bloom on Washington beaches and in offshore waters were documented in Oregon offshore waters on the northern edge of Heceta Bank. That species, P. australis, has been shown to be highly toxic in this region; shore-based data show that razor clams on Oregon beaches were also toxic at the time when P. australis was observed offshore. Both measured and modeled currents show that transport was more than sufficient to move cells from the vicinity of Heceta Bank, Oregon to southern Washington beaches by the time the toxic cells were observed on those beaches. The rapid transport was due in part to the presence of the buoyant plume from the Columbia River, a common feature in winter and spring in nearshore waters of the U.S. Pacific Northwest.     

Zooplankton feeding on seston in the Rhone River plume area (NW Mediterranean Sea) in May 1988

In the Rhone delta area the seston concentration was maximum in the plume waters where small-sized particles dominated, while marine waters were characterized by large particles. The food conditions were optimal for grazers in the interface layer, where the high chlorophyll concentration contrasted with the low values found under the plume.The mesozooplankton specific composition did not show marked difference in and outside the plume. No special pattern for particle size selection by grazers appeared in the plume, contrary to marine waters, where largest particles were the most intensively grazed. The calculations of specific ingestion and filtration rates show that the plume waters (particularly at the salinity interface) were more favourable to zooplankton feeding than the marine ones (outside and under the plume). Nevertheless, taking into account the high level of seston biomass in the whole area studied, the daily grazing pressure of mesozooplankton was very low.     

Dispersal and Diving Adjustments of the Green Turtle Chelonia mydas in Response to Dynamic Environmental Conditions during Post-Nesting Migration

In response to seasonality and spatial segregation of resources, sea turtles undertake long journeys between their nesting sites and foraging grounds. While satellite tracking has made it possible to outline their migration routes, we still have little knowledge of how they select their foraging grounds and adapt their migration to dynamic environmental conditions. Here, we analyzed the trajectories and diving behavior of 19 adult green turtles (Chelonia mydas) during their post-nesting migration from French Guiana and Suriname to their foraging grounds off the coast of Brazil. First Passage Time analysis was used to identify foraging areas located off Ceará state of Brazil, where the associated habitat corresponds to favorable conditions for seagrass growth, i.e. clear and shallow waters. The dispersal and diving patterns of the turtles revealed several behavioral adaptations to the strong hydrodynamic processes induced by both the North Brazil current and the Amazon River plume. All green turtles migrated south-eastward after the nesting season, confirming that they coped with the strong counter North Brazil current by using a tight corridor close to the shore. The time spent within the Amazon plume also altered the location of their feeding habitats as the longer individuals stayed within the plume, the sooner they initiated foraging. The green turtles performed deeper and shorter dives while crossing the mouth of the Amazon, a strategy which would help turtles avoid the most turbulent upper surface layers of the plume. These adjustments reveal the remarkable plasticity of this green turtle population when reducing energy costs induced by migration.     

Influence of Sediment Inflow on Phytoplankton Primary Productivity in Lake Tahoe (California-Nevada)

Light, nutrient concentrations and phytoplankton photosynthesis were studied in a Lake Tahoe sediment plume during maximum spring runoff. They were compared with conditions in clear lake waters not influenced by inlets. In the plume, nutrient concentrations increased in proportion to sediment density whereas light transmission of water was reduced with little effect on the spectral composition except for red light. Light inhibition of photosynthesis at the lake surface was less pronounced in the plume than in clear water and light limitation occurred more rapidly in deeper layers. Evidence from both lake experiments and laboratory bioassays suggests that iron had the greatest stimulatory effect on both photosynthetic activity and biomass growth at maximum sediment densities near the stream inlet. Because of less surface inhibition, photosynthetic light energy utilization efficiency was usually higher in the sediment plume which occurred in relatively shallow areas near the shore. In order to estimate overall effects of enhanced turbidity associated with nutrient loading on Lake Tahoe's primary productivity, profiles taken in shallow areas near the lakeshore were extrapolated to the maximum depth of photosynthesis. Light limitation would cause decreasing productivity, but nutrient stimulation would make this effect less pronounced. The overall effect would depend on the extent of sediment loading relative to nutrient loading.     

Rate of Natural Attenuation of Tert-Butyl Alcohol at a Chemical Plant

Tert-butyl alcohol (TBA) may be present in groundwater as an original component of leaked gasoline, or as a degradation product of methyl tert-butyl ether (MTBE). Evidence for natural attenuation of TBA in groundwater is presented from a chemical plant in Pasadena, Texas. Shallow groundwater in several areas of the plant has been affected by historic leaks and spills of TBA. A decade of regular groundwater monitoring of one groundwater plume, consisting primarily of TBA, shows generally declining concentrations and a plume area that is shrinking. Natural attenuation mechanisms are limiting the advective transport of TBA. The principal mechanism of attenuation in this case is probably biodegradation as the other physical components of natural attenuation (dilution, dispersion, diffusion, adsorption, chemical reactions, and volatilization) cannot explain the behavior of the plume over time. Biodegradation was also indicated by the enrichment of stable carbon isotope composition (¹³C/¹²C) of TBA along the flow path. Preliminary dissolved gas and electron acceptor analyses indicate the groundwater is at least under sulfate reducing condition in the core of the plume and the process responsible for biodegradation of TBA may include fermentation under aerobic (plume fringes) and possible anaerobic conditions. This case history demonstrates that natural attenuation of TBA is important, and can be used as a groundwater management tool at this site.     

Microbiological Parameters for Differentiating between Coastal and Open Waters in the Northern Baltic Proper and the Gulf of Finland

The abundance of selected types of micro-organisms was compared between seven sites in inshore and offshore areas in the northern Baltic proper and at the entrance to the Gulf of Finland. The aim was to find out which of the microbiological parameters indicate terrestrial and littoral influences on the sites investigated and which of them indicate offshore conditions. During four cruises in 1977–78, samples were collected from 1-0 m depth, within one or a few days, at five offshore and two inshore sites.
Microbial numbers decreased consistently with increasing distance from the shore. The influence of terrestrial runoff, outflows from littoral areas and sediments was clear in the two Tvärminne inshore areas but not in the Ajax area situated about 10 km seaward of the outermost skerries of the Tvärminne archipelago. The influence of these factors was most distinctly indicated by viable bacteria at 18°C and polymyxin-resistant bacteria, rods and bacterial spores. Offshore characteristics were indicated by vibrios and bacteria obviously in a starved state. Proteolytic bacteria and yeasts did not indicate either of these conditions.     

Flight call rates of migrating thrushes: effects of wind conditions,humidity and time of day at an illuminated offshore platform

Many bird species call during migration, but call rates not necessarily reflect migration intensity. They rather seem to increase under deteriorating flight conditions. Often, nocturnal mass collisions at illuminated structures coincide with such conditions and are accompanied with high call rates of migrants. Thus, call rates could act as an indicator for situations with high collision risk for birds namely at offshore sites with hardly any alternatives for landing. In the face of increasing numbers of offshore wind farms knowledge about the environmental conditions in which maximum call rates occur, is needed for mitigation measures. In this first long‐term study at an offshore site in the southern North Sea we investigated the effect of weather on the frequency of flight calls of three thrush‐species at an illuminated platform. Flight calls were registered automatically during three autumn migration seasons. Besides generally higher call rates from 5 to 2 h before until 6 h after midnight, call rates increased with tailwinds, a change of the tailwind component during the first part of the night, offshore crosswinds and very high humidity. A monitoring programme is suggested that could help to reduce mass mortalities at illuminated structures.     

Distribution of diatom surface sediment assemblages within Effingham Inlet, a temperate fjord on the west coast of Vancouver Island (Canada)

Twenty-nine surface sediment samples from Effingham Inlet, a small fjord on the west coast of Vancouver Island, British Columbia, were analyzed for diatoms. This fjord has been selected for paleoceanographic investigation due to the presence of laminated sediments resulting from the dysoxic to anoxic bottom water conditions in the inner and outer basins of the inlet. Distributional patterns of the diatom microflora reflected proximity to littoral regions, phytoplankton production, and marine influence from outside the fjord. Principal components and cluster analyses of the microflora established four diatom assemblages with a clear separation between the inner and outer basin diatom floras. Inner basin stations were characterized by elevated absolute abundance with assemblages dominated by spring–early summer bloom taxa including Skeletonema costatum, Thalassiosira nordenskioeldii, and Thalassiosira pacifica. Chaetoceros spp. resting spores were abundant throughout Effingham Inlet, with the exception of the stations closest to the fjord head. Stations located in the outer basin and towards the fjord mouth had relatively lower absolute abundance yet showed a higher relative and absolute abundance of Thalassionema nitzschioides, Rhizosolenia setigera, Coscinodiscus radiatus, Ditylum brightwellii, Odontella longicruris, and Paralia sulcata in relation to the inner basin. Many of these latter taxa are often associated with late summer and autumn conditions in fjords along coastal British Columbia. Oceanographic data for Effingham Inlet suggest that increased offshore penetration is more likely to occur from summer to early fall, with a more restricted offshore influence in the inner basin. Diatom surface sediment assemblages in Effingham Inlet appear to reflect incursions of offshore waters into the fjord. Absolute abundance estimates and the preservation of lightly silicified taxa suggest excellent preservation of fossil material in the sediments of the predominantly anoxic inner basin. Preservation in the outer basin is reduced, reflecting more frequent recharge by oxygenated waters spilling over the outer sill into the basin. Our findings suggest the inner basin should be an optimal site for reconstruction of diatom production, with records from the outer basin providing more consistent information about offshore influence and coastal upwelling conditions over the Holocene. Estimates of diatom abundance within the inner basin sediment may serve as a good proxy of production, although proxy tracers of bottom water conditions and sedimentological analyses must be coupled to the diatom record to ensure depositional conditions were not influencing valve preservation or abundance. Our results suggest that fjords can serve as good environments for paleoceanographic reconstructions of both inshore and offshore conditions although careful site selection and understanding of processes affecting the microfossil record are essential.     

Reef Odor: A Wake Up Call for Navigation in Reef Fish Larvae

The behavior of reef fish larvae, equipped with a complex toolbox of sensory apparatus, has become a central issue in understanding their transport in the ocean. In this study pelagic reef fish larvae were monitored using an unmanned open-ocean tracking device, the drifting in-situ chamber (DISC), deployed sequentially in oceanic waters and in reef-born odor plumes propagating offshore with the ebb flow. A total of 83 larvae of two taxonomic groups of the families Pomacentridae and Apogonidae were observed in the two water masses around One Tree Island, southern Great Barrier Reef. The study provides the first in-situ evidence that pelagic reef fish larvae discriminate reef odor and respond by changing their swimming speed and direction. It concludes that reef fish larvae smell the presence of coral reefs from several kilometers offshore and this odor is a primary component of their navigational system and activates other directional sensory cues. The two families expressed differences in their response that could be adapted to maintain a position close to the reef. In particular, damselfish larvae embedded in the odor plume detected the location of the reef crest and swam westward and parallel to shore on both sides of the island. This study underlines the critical importance of in situ Lagrangian observations to provide unique information on larval fish behavioral decisions. From an ecological perspective the central role of olfactory signals in marine population connectivity raises concerns about the effects of pollution and acidification of oceans, which can alter chemical cues and olfactory responses.