More than just noise: Chance,mating success,and sexual selection

Chance plays a critical but underappreciated role in determining mating success. In many cases, we tend to think of chance as background noise that can be ignored in studies of mating dynamics. When the influence of chance is consistent across contexts, chance can be thought of as background noise; in other cases, however, the impact of chance on mating success can influence our understanding of how mates are acquired and how sexual selection operates. In particular, when the importance of chance covaries with biological or ecological factors in a systematic manner—that is, when chance becomes consistently more or less important under certain conditions—then chance is important to consider if we want to fully understand the operation of mate acquisition and sexual selection. Here, we present a model that explores how chance covaries with factors such as sex ratio, adult population size, and mating regime in determining variation in mating success. We find that in some cases, chance covaries with adult population size and the operational sex ratio to create variation in mating success. We discuss how chance can influence our more general understanding of the operation of mating dynamics and sexual selection.     

More than just tails: intrinsic disorder in histone proteins

Many biologically active proteins are disordered as a whole, or contain long disordered regions. These intrinsically disordered proteins/regions are very common in nature, abundantly found in all organisms, where they carry out important biological functions. The functions of these proteins complement the functional repertoire of "normal" ordered proteins, and many protein functional classes are heavily dependent on intrinsic disorder. Among these disorder-centric functions are interactions with nucleic acids and protein complex assembly. In this study, we present the results of comprehensive bioinformatics analyses of the abundance and roles of intrinsic disorder in 2007 histones from 746 species. We show that all the members of the histone family are intrinsically disordered proteins. Furthermore, intrinsic disorder is not only abundant in histones, but is absolutely necessary for various histone functions, starting from heterodimerization to formation of higher order oligomers, to interactions with DNA and other proteins, and to posttranslational modifications.     

Viruses in neurodegenerative diseases: More than just suspects in crimes

Neurodegenerative diseases (NDs) such as Alzheimer’s and Parkinson’s disease are fatal neurological diseases that can be of idiopathic, genetic, or even infectious origin, as in the case of transmissible spongiform encephalopathies. The etiological factors that lead to neurodegeneration remain unknown but likely involve a combination of aging, genetic risk factors, and environmental stressors. Accumulating evidence hints at an association of viruses with neurodegenerative disorders and suggests that virus-induced neuroinflammation and perturbation of neuronal protein quality control can be involved in the early steps of disease development. In this review, we focus on emerging evidence for a correlation between NDs and viral infection and discuss how viral manipulations of cellular processes can affect the formation and dissemination of disease-associated protein aggregates.     

PINCH: More than just an adaptor protein in cellular response

Particularly interesting new cysteine‐histidine‐rich protein (PINCH) is a LIM‐domain‐only adaptor protein involved in protein recruitment, subsequent assembly of multi‐protein complexes, and subcellular localization of these complexes. PINCH is developmentally regulated and its expression is critical for proper cytoskeletal organization and extracellular matrix adhesion. Although PINCH has no catalytic abilities, the PIP (PINCH–ILK–parvin) complex serves as a link between integrins and components of growth factor receptor kinase and GTPase signaling pathways. Accordingly, PINCH‐mediated signaling induces cell migration, spreading, and survival. Further research on the signaling cascades affected by PINCH is key to appreciating its biological significance in cell fate and systems maintenance, as the developmental functions of PINCH may extend to disease states and the cellular response to damage. PINCH is implicated in a diverse array of diseases including renal failure, cardiomyopathy, nervous system degeneration and demyelination, and tumorigenesis. This review presents evidence for PINCH's structural and functional importance in normal cellular processes and in pathogenesis. The current data for PINCH expression in nervous system disease is substantial, but due to the complex and ubiquitous nature of this protein, our understanding of its function in pathology remains unclear. In this review, an overview of studies identifying PINCH binding partners, their molecular interactions, and the potentially overlapping role(s) of PINCH in cancer and in nervous system diseases will be discussed. Many questions remain regarding PINCH's role in cells. What induces cell‐specific PINCH expression? How does PINCH expression contribute to cell fate in the central nervous system? More broadly, is PINCH expression in disease a good thing? Clarifying the ambiguous functions of PINCH expression in the central nervous system and other systems is important to understand more clearly signaling events both in health and disease. J. Cell. Physiol. 226: 940–947, 2011. © 2010 Wiley‐Liss, Inc.     

More than just drought: complexity of recruitment patterns in Mediterranean forests

Understanding community dynamics during early life stages of trees is critical for the prediction of future species composition. In Mediterranean forests drought is a major constraint for regeneration, but likely not the only factor determining the observed spatial patterns. We carried out a sowing experiment aimed at identifying main filters during seed-seedling transition. Specifically, we studied seed fate (predation, fungi infection, emergence) and subsequent seedling performance (mortality during the first summer and overall recruitment after 2 years) of four co-occurring Mediterranean tree species (Quercus ilex, Quercus faginea, Juniperus thurifera, Pinus nigra). We related these processes to the dominant species composition, microhabitat heterogeneity, herb cover and seed mass. The identity of the dominant species in the forest canopy was more important for recruitment than the forest canopy being dominated by conspecific vs. heterospecific species. The patterns we found suggest that biotic interactions such as facilitation (lower mortality under the canopies) and herb competition (during emergence of J. thurifera) are relevant during recruitment. Moreover, our results pointed to ontogenetic conflicts regarding the seed mass of Q. faginea and to density-dependent seed mortality for Q. ilex, rarely described in Mediterranean ecosystems. We propose that our study species experience population growth in forests dominated by heterospecifics where the recruitment success depends on habitat heterogeneity and on moderated biotic and abiotic stresses created by each species. Our results reveal patterns and mechanisms involved in recruitment constraints that add complexity to the well-known drought-related processes in Mediterranean ecosystems.     

Aquaporins and (in)fertility: More than just water transport

Aquaporins (AQPs) are a family of channel proteins that facilitate the transport of water and small solutes across biological membranes. They are widely distributed throughout the organism, having a number of key functions, some of them unexpected, both in health and disease. Among the various diseases in which AQPs are involved, infertility has been overlooked. According to the World Health Organization (WHO) infertility is a global public health problem with one third of the couples suffering from subfertility or even infertility due to male or female factors alone or combined. Thus, there is an urgent need to unveil the molecular mechanisms that control gametes production, maturation and fertilization-related events, to more specifically determine infertility causes. In addition, as more couples seek for fertility treatment through assisted reproductive technologies (ART), it is pivotal to understand how these techniques can be improved. AQPs are heterogeneously expressed throughout the male and female reproductive tracts, highlighting a possible regulatory role for these proteins in conception. In fact, their function, far beyond water transport, highlights potential intervention points to enhance ART. In this review we discuss AQPs distribution and structural organization, functions, and modulation throughout the male and female reproductive tracts and their relevance to the reproductive success. We also highlight the most recent advances and research trends regarding how the different AQPs are involved and regulated in specific mechanisms underlying (in)fertility. Finally, we discuss the involvement of AQPs in ART-related processes and how their handling can lead to improvement of infertility treatment.     

Zooplankton dynamics in Lake Mendota: short-term versus long-term changes

SUMMARY.

• 1 A study of zooplankton dynamics was carried out in Lake Mendota, Wisconsin, for the years 1976–80. The data were compared with those of E. A. Birge, obtained in the years 1894–96.
• 2 The zooplankton annual cycles and sizes of standing crop were similar in both studies. There was more year-to-year variation within each study than there was between the two studies separated by over 80 years.
• 3 The data are discussed in relation to the prediction of long-term change in lakes. The value of a historical data set for long-term ecological studies is emphasized.

     

More than just a Long Paddock: Fostering native vegetation recovery in Riverina Travelling Stock Routes and Reserves

Travelling Stock Reserves provide the most significant networks of natural habitat in the New South Wales Riverina. Substantial biodiversity gains at two sites over 10 years inspired similar works on more than 200 reserves with high levels of demonstrable change occurring.     

More than just the postal service: novel roles for IFT proteins in signal transduction

Disruption of intraflagellar transport (IFT) results in loss of flagella and cilia as well as their signaling activity, making it difficult to assess possible roles of IFT in signal transduction. In a recent issue of Cell, Wang et al. (2006) used a temperature-sensitive IFT mutant to separate flagella assembly from signaling activity, and they show that IFT has a direct role in forming signaling complexes in the flagella.     

More than just a pair of blue genes: how cyanobacteria adapt to changes in their light environment

Cyanobacteria require light to perform photosynthesis, but not all colors of light are equally useable for them. In particular, blue light-grown cyanobacterial strains, including the well-studied model organism Synechocystis sp. PCC 6803 (Synechocystis), have been observed to exhibit slower growth rates than white or red light-grown cells. In this issue of Physiologia Plantarum, Luimstra et al. (2020) have attempted to understand why cyanobacterial cells suffer under blue light. They measured the molecular and genetic responses of Synechocystis cells to being shifted from white light to blue light. They found that blue light-grown cells make changes that lead to a redistribution of energy flow between the two photosystems that power photosynthesis. These findings could help researchers identify avenues for optimizing photosynthesis in cyanobacterial species, a group of organisms which show great promise as potential solar-powered factories for the production of biofuels and other high-value products.     

More than just a focus: The chromatin response to DNA damage and its role in genome integrity maintenance

Following the discovery in 1998 of γ-H2AX, the first histone modification induced by DNA damage, interest in the changes to chromatin induced by DNA damage has exploded, and a vast amount of information has been generated. However, there has been a discrepancy between our rapidly advancing knowledge of how chromatin responds to DNA damage and the understanding of why cells mobilize large segments of chromatin to protect the genome against destabilizing effects posed by tiny DNA lesions. Recent research has provided insights into these issues and suggests that chromatin responses induced by DNA damage are not simply the accumulation of 'nuclear foci' but are mechanisms required to guard genome integrity.     

More than just a coating: Ecological importance,taxonomic occurrence and phylogenetic relationships of seed coat mucilage

Studies on the ecological importance of seed coat mucilage have provided valuable information about its roles in critical stages of the plant life cycle. Seed mucilage may, by providing a moist environment and maintaining metabolic activity in the seed, promote seed development. In seed dispersal, seed mucilage influences topochory, epizoochory, endozoochory and hydrochory by anchorage of seeds to soil surface, lubrication or changing the specific weight of the seed. In arid environments, seed mucilage can prevent seeds from drying or initiate DNA repair mechanisms, thereby maintaining the soil seed bank. Seed mucilage reduces oxygen diffusion to the seed and thus has a role in regulating seed dormancy. Due to it being hydrophilous, acting as a physical barrier and containing chemicals, seed mucilage is proposed to promote seed germination in favorable environments. In seedling growth, seed mucilage may lubricate the radicle as it penetrates the soil and be degraded by soil microfloras and thus promote seedling growth. Further investigation of seed mucilage for more species in diverse habitats from the perspectives of evolution, genetics, proteomics, phylogeny and plant–microbe interactions would contribute substantially to our understanding about its ecological importance.