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Seascape genomics reveals fine‐scale patterns of dispersal for a reef fish along the ecologically divergent coast of Northwestern Australia
Authors:Joseph D. DiBattista  Michael J. Travers  Glenn I. Moore  Richard D. Evans  Stephen J. Newman  Ming Feng  Samuel D. Moyle  Rebecca J. Gorton  Thor Saunders  Oliver Berry
Affiliation:1. Department of Environment and Agriculture, Curtin University, Perth, WA, Australia;2. Western Australian Marine Science Institution, Crawley, WA, Australia;3. Western Australia Fisheries and Marine Research Laboratories, Department of Primary Industries and Regional Development, Government of Western Australia, North Beach, WA, Australia;4. Department of Aquatic Zoology, Western Australian Museum, Welshpool, WA, Australia;5. Department of Biodiversity, Conservation and Attractions, Perth, WA, Australia;6. School of Biological Sciences and Oceans Institute, University of Western Australia, Crawley, WA, Australia;7. CSIRO National Collections and Marine Infrastructure, Level 4 – Indian Ocean Marine Research Centre, The University of Western Australia, Crawley, WA, Australia;8. CSIRO Oceans & Atmosphere, Hobart, TAS, Australia;9. Northern Territory Department of Primary Industry and Fisheries, Darwin, NT, Australia
Abstract:Understanding the drivers of dispersal among populations is a central topic in marine ecology and fundamental for spatially explicit management of marine resources. The extensive coast of Northwestern Australia provides an emerging frontier for implementing new genomic tools to comparatively identify patterns of dispersal across diverse and extreme environmental conditions. Here, we focused on the stripey snapper (Lutjanus carponotatus), which is important to recreational, charter‐based and customary fishers throughout the Indo‐West Pacific. We collected 1,016 L. carponotatus samples at 51 locations in the coastal waters of Northwestern Australia ranging from the Northern Territory to Shark Bay and adopted a genotype‐by‐sequencing approach to test whether realized connectivity (via larval dispersal) was related to extreme gradients in coastal hydrodynamics. Hydrodynamic simulations using CONNIE and a more detailed treatment in the Kimberley Bioregion provided null models for comparison. Based on 4,402 polymorphic single nucleotide polymorphism loci shared across all individuals, we demonstrated significant genetic subdivision between the Shark Bay Bioregion in the south and all locations within the remaining, more northern bioregions. More importantly, we identified a zone of admixture spanning a distance of 180 km at the border of the Kimberley and Canning bioregions, including the Buccaneer Archipelago and adjacent waters, which collectively experiences the largest tropical tidal range and some of the fastest tidal currents in the world. Further testing of the generality of this admixture zone in other shallow water species across broader geographic ranges will be critical for our understanding of the population dynamics and genetic structure of marine taxa in our tropical oceans.
Keywords:biodiversity  coral reef  DArTseq  environmental gradients  Kimberley  marine
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