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土壤病毒生态学研究方法
引用本文:韩丽丽,于丹婷,贺纪正.土壤病毒生态学研究方法[J].生态学报,2017,37(6):1749-1756.
作者姓名:韩丽丽  于丹婷  贺纪正
作者单位:中国科学院生态环境研究中心, 城市与区域生态国家重点实验室, 北京 100085,中国科学院生态环境研究中心, 城市与区域生态国家重点实验室, 北京 100085;中国科学院大学, 北京 100049,中国科学院生态环境研究中心, 城市与区域生态国家重点实验室, 北京 100085
基金项目:国家自然科学基金资助项目(41571248,41301265,41230857)
摘    要:病毒是地球上最丰富的生物实体,每克土壤中可包含数以亿计的病毒,它不仅影响土壤中其它微生物的群落组成、土壤元素的生物地球化学循环,还会影响土壤微生物的物种进化,甚至影响植物、动物和人体健康。目前人们对土壤中病毒的种类及丰度、分布特征以及功能引起的生态环境效应还知之甚少。在概述病毒生态学研究方法的基础上,对土壤病毒的提取、纯化、定量及分子生态学方法等基本流程进行了比较分析,以期建立一套快速简便、高效稳定的适用于土壤病毒研究的方法,并用于研究土壤病毒的多样性及分布特征,探讨病毒在环境中的生存和传播机制,为土壤病毒的防控及开发利用提供支撑。

关 键 词:土壤病毒  病毒生态学  宏病毒组学  分子生物学方法
收稿时间:2015/11/12 0:00:00
修稿时间:2016/6/30 0:00:00

Research methods for soil viral ecology
HAN Lili,YU Danting and HE Jizheng.Research methods for soil viral ecology[J].Acta Ecologica Sinica,2017,37(6):1749-1756.
Authors:HAN Lili  YU Danting and HE Jizheng
Institution:State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China,State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China;University of Chinese Academy of Sciences, Beijing 100049, China and State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
Abstract:Viruses are the most abundant biological entities on the planet, and can reach 1010 viral particles per gram of soil. Viruses affect the composition of microbial communities, mediate soil biogeochemical cycles, regulate soil microbial evolution, and threaten the health of plants and animals, including humans. However, there is limited knowledge on the abundance and distribution patterns of viruses and the manner in which they affect ecological processes. This study focuses on the comparative approaches to study soil viruses, including their extraction, purification, quantification, and methods pertaining to molecular ecology. The development of reliable and highly efficient methods to evaluate soil viral particles is desirable, because it aids the study of soil virus diversity and distribution. Therefore, these methods will improve our understanding of viral propagation mechanisms in soils, and will provide information on how to control viruses to ensure adequate public health and safety.
Keywords:soil virus  viral ecology  metaviromics  molecular biological methods
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