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Cellware--a multi-algorithmic software for computational systems biology
Authors:Dhar Pawan  Meng Tan Chee  Somani Sandeep  Ye Li  Sairam Anand  Chitre Mandar  Hao Zhu  Sakharkar Kishore
Institution:Systems Biology Group, Bioinformatics Institute, 30 Biopolis Street, No. #07-01 Matrix Building, Singapore 138671. pk@bii.a-star.edu.sg
Abstract:The intracellular environment of a cell hosts a wide variety of enzymatic reactions, diffusion events, molecular binding, polymerization and metabolic channeling. To transform these biological events into a computational framework, distinct modeling strategies are required. While currently no tool is capable of capturing all these events, progress is being made to create an integrated environment for the modeling community. To address this niche requirement, Cellware has been developed to offer a multi-algorithmic environment for modeling and simulating both deterministic and stochastic events in the cell. AVAILABILITY: The software is available for free and can be downloaded from http://www.bii.a-star.edu.sg/sbg/cellware
Keywords:
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