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模拟青霉素分批补料发酵过程的细胞自动机模型
引用本文:于乃功,阮晓钢.模拟青霉素分批补料发酵过程的细胞自动机模型[J].生物物理学报,2005,21(2):130-138.
作者姓名:于乃功  阮晓钢
作者单位:北京工业大学电子信息与控制工程学院,北京,100022
基金项目:国家自然科学基金项目 (60274060,60375017),教育部科学技术研究重点项目(203002)
摘    要:根据青霉素产生菌的生长机理和青霉素分批补料发酵过程的动力学特性,在Paull等建立的形态学结构动力学模型的基础上,建立了模拟青霉素分批补料发酵过程的细胞自动机模型。模型采用三维细胞自动机作为菌体生长空间,采用Moore型邻域作为细胞邻域,其演化规则根据青霉素分批补料发酵过程中菌体生长机理和简化动力学结构模型设计。模型中的每一个细胞既可代表单个产黄青霉菌体细胞,又可代表特定数量的这种菌体细胞,它具有不同的状态。对模型进行的仿真实验结果表明:模型不但能一致地复现形态学结构动力学模型所描述的青霉素分批补料发酵过程的演化特性,而且较形态学结构动力学模型更加直观地刻画了青霉素分批补料发酵过程的演化行为。最后,对所建模型在实际生产过程中的应用问题进行了分析,指出了需要进一步研究的问题。

关 键 词:青霉素发酵过程  发酵动力学  形态学结构模型  细胞自动机模型
收稿时间:2004-07-28
修稿时间:2004年7月28日

A Cellular Automata Model for Simulating Fed-batch Penicillin Fermentation Process
YU Nai-gong,RUAN Xiao-gang.A Cellular Automata Model for Simulating Fed-batch Penicillin Fermentation Process[J].Acta Biophysica Sinica,2005,21(2):130-138.
Authors:YU Nai-gong  RUAN Xiao-gang
Institution:Electronic Information &|Control Engineering College, Beijing University of Technology, Beijing 100022, China
Abstract:Based on a hyphal differentiation and penicillin production structured kinetic model, according to the growth mechanism of penicillin production bacteria and the characteristic of penicillin fed-batch fermentation, a cellular automata model for simulating penicillin fed-batch fermentation process (CAPFM) was established. CAPFM adopted three-dimensional cellular automata as its growth space and adopted Moore type neighborhood as its cell neighborhood. The transition rules of CAPFM were designed based on the mechanism and structured kinetic model of penicillin fed-batch fermentation process. Every cell of CAPFM represented a single or specific number of penicillin production bacteria, and they had various states. The simulation experimental results showed that CAPFM replicates the evolution behaviour of penicillin fed-batch fermentation process described by penicillin production structured kinetic model accordantly. Finally, the application problem of CAPFM in practical production processes is analyzed, and the future study problems are pointed out.
Keywords:Penicillin fermentation process  Fermentation dynamic  Morphologically structured model  Cellular automata model
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