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Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
Authors:Matthew Parks  Richard Cronn and Aaron Liston
Institution:(1) Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA;(2) Pacific Northwest Research Station, USDA Forest Service, Corvallis, OR 97331, USA
Abstract:

Background  

Molecular evolutionary studies share the common goal of elucidating historical relationships, and the common challenge of adequately sampling taxa and characters. Particularly at low taxonomic levels, recent divergence, rapid radiations, and conservative genome evolution yield limited sequence variation, and dense taxon sampling is often desirable. Recent advances in massively parallel sequencing make it possible to rapidly obtain large amounts of sequence data, and multiplexing makes extensive sampling of megabase sequences feasible. Is it possible to efficiently apply massively parallel sequencing to increase phylogenetic resolution at low taxonomic levels?
Keywords:
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