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RNAstructure: software for RNA secondary structure prediction and analysis
Authors:Jessica?S?Reuter  Email author" target="_blank">David?H?MathewsEmail author
Institution:(1) Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester Medical Center, 601 Elmwood Avenue, Box 712, Rochester, NY 14642, USA
Abstract:

Background  

To understand an RNA sequence's mechanism of action, the structure must be known. Furthermore, target RNA structure is an important consideration in the design of small interfering RNAs and antisense DNA oligonucleotides. RNA secondary structure prediction, using thermodynamics, can be used to develop hypotheses about the structure of an RNA sequence.
Keywords:
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