| 序列同源性分析软件Blast的WEB界面构建及其应用 |
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| 引用本文： | 张成岗,张利达,欧阳曙光,张启发,贺福初.序列同源性分析软件Blast的WEB界面构建及其应用[J].生物化学与生物物理进展,2001,28(6):916-918. |
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| 作者姓名： | 张成岗 张利达 欧阳曙光 张启发 贺福初 |
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| 作者单位： | 1. 军事医学科学院放射医学研究所基因组学与蛋白质组学研究室,北京,100850
2. 华中农业大学作物遗传改良国家重点实验室,武汉,430070 |
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| 基金项目： | 军事医学科学院科技创新研究启动基金(9905105)、国家自然科学基金项目(39900041, 39900074)与重点项目(39730310)、国家“863”项目(863-102-10-04-04)部分资助. |
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| 摘 要： | 基于局域网(Intranet)内的PC/Linux服务器, 构建了序列同源性分析软件Blast的WEB界面. 局域网内的所有计算机均可通过WEB方式访问该服务器进行公共数据库和自建数据库的查询，具有保密、高效、免费的优点，能够满足实验室和研究院所的大规模、快速数据分析任务.
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| 关 键 词： | 微机 Linux操作系统 局域网，Blast软件 WEB界面，生物信息学 |
| 收稿时间： | 3/7/2001 12:00:00 AM |
| 修稿时间： | 2001年3月7日 |
Construction and Application of the WEB Interface of Blast Package |
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| ZHANG Cheng-Gang,ZHANG Li-D,OUYANG Shu-Guang,ZHANG Qi-Fa and HE Fu-Chu.Construction and Application of the WEB Interface of Blast Package[J].Progress In Biochemistry and Biophysics,2001,28(6):916-918. |
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| Authors: | ZHANG Cheng-Gang ZHANG Li-D OUYANG Shu-Guang ZHANG Qi-Fa and HE Fu-Chu |
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| Institution: | Department of Genomics and Proteomics, Beijing Institute of Radiation Medicine, Beijing 100850, China;National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China;Department of Genomics and Proteomics, Beijing Institute of Radiation Medicine, Beijing 100850, China;National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China;Department of Genomics and Proteomics, Beijing Institute of Radiation Medicine, Beijing 100850, China |
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| Abstract: | Based on a microcomputer installed with the Linux operating system and integrated with the intranet environment, the Blast software with the WEB interface was constructed for visualized sequence similarity analyze. All of the users in the intranet could visit the WEB Blast server using WEB-browser to analysis their sequence easily. The databases to be searched might be either the public database such as EMBL or GenBank nucleic acid sequence database and SwissProt amino acid sequence database or the private sequence databases prepared by themselves. Result demonstrated that this intranet WEB Blast environment is very useful in large-scale nucleic acid sequences and amino acid sequences analysis. |
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| Keywords: | microcomputer Linux operating system intranet Blast software WEB interface bioinformatics |
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