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人脑内-含有ACP样结构域新基因的发现
引用本文:邓艳春,药立波,刘新平,聂晓燕,王吉村,张晓光,苏成芝.人脑内-含有ACP样结构域新基因的发现[J].生物化学与生物物理进展,2001,28(1):72-76.
作者姓名:邓艳春  药立波  刘新平  聂晓燕  王吉村  张晓光  苏成芝
作者单位:第四军医大学生物化学与分子生物学教研室,
基金项目:国家自然科学基金面上项目和杰出青年基金资助(39825113).
摘    要:为寻找脑内新基因,以正常成人全脑cDNA为模板,采用锚定PCR方法进行扩增,将经琼脂糖DNA电泳 鉴定获得的一约1200bp大小的特异性条带回收,并克隆入Teasy载体.用310 Genetic Analyzer进行自动测序. 所得序列进行生物信息学分析BLAST相似性分析结果证明所得序列为新序列,读框分析表明,该序列中存在 一完整编码区,编码含357个氨基酸的蛋白质.ProDom软件分析发现其含有酰基携带蛋白(ACP)样结构域. 随后,经3'RACE法克隆到该基因的全长cDNA,其全长为2024bp,染色体定位在14q11.2,含有16个外显子, 15个内含子,该基因已登录到GenBank.经设计编码区引物,从Teasy载体扩增出编码区后再克隆入pGEX-4T1 表达载体,经异丙基硫代-D-乳糖苷(IPTG)化学诱导表达.其编码区克隆人pGEX-4T1表达载体后,转入 JM109宿主菌,经IPTG诱导已得到表达.点杂交及RNA印迹表明,该基因在正常成人脑内广泛高表达.

关 键 词:基因,脑,乙酰基载体蛋白结构域,生物信息学
修稿时间:1999年12月16

Exploring a New Gene Containing ACP Like Domain in HumanBrain and Expression It in E. coli
DENG Yan-chun,YAO Li-Bo,LIU Xin-Ping,NIE Xiao-yan,WANG Ji-cun,ZHANG Xiao-Guang,SU Cheng-Zhi.Exploring a New Gene Containing ACP Like Domain in HumanBrain and Expression It in E. coli[J].Progress In Biochemistry and Biophysics,2001,28(1):72-76.
Authors:DENG Yan-chun  YAO Li-Bo  LIU Xin-Ping  NIE Xiao-yan  WANG Ji-cun  ZHANG Xiao-Guang  SU Cheng-Zhi
Abstract:To look for new genes from human brain, get a fragment was obtained using adaptor primer and 3' anchor polymerase chain reaction (PCR) with the human adult whole brain cDNA as template. The fragment was cloned into T easy vector and automatically sequenced with 310 Genetic Analyzer. Later the whole length cDNA of this novel gene was got with the method of 3'rapid amplification of cDNA end (RACE). The whole length of cDNA of this novel gene is 2 024 bp. Chromsome location is at 14q11.2 including 16 extrons and 15 introns. After scanning the sequence against GenBank it is proved that the sequence is a new one. ORF analysis showed that there is a complete coding region in it, it can interprate a protein containing 357 amino acid residules. ProDom analysis result showed that there is an acyl carrier protein (ACP) like domain in it. The gene was banked into GenBank. Then, a pare of primers were designed and were used to amplify the coding region and cloned into pGEX-4T1 expressing vector to express it in E. coli . The Dot blotting and Northern blot showed that this novel gene is highly expressed in the normal adult human brain.
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