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Folding of two large nucleotide chains
Authors:R Nussinov  G Pieczenik
Institution:Biochemistry Department, Nelson Biological Laboratories, Busch Campus, Rutgers University, New Brunswick, New Jersey 08903, U.S.A.
Abstract:We have already described the FOLD-A code designed for folding mRNA's and single stranded DNA molecules (Nussinov & Pieczenik, 1984). In this paper we describe its application to two long polynucleotide chains: the A protein gene of the MS2 RNA and the whole genome of the phi X 174 phage. The folded form of the single stranded DNA of the phi X 174 is a six armed star with the origin of replication in its center.
Keywords:Address correspondence to: Ruth Nussinov  Department of Computer Science  School of Mathematics  Tel Aviv University  Ramat Aviv  Israel  
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