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应用双向热循环消减SELEX技术筛选肺癌血清核酸适配体
引用本文:袁红霞,陈聪盈,王鸣刚,孙文平,王维君,张蕾,翟蒙,廖世奇.应用双向热循环消减SELEX技术筛选肺癌血清核酸适配体[J].中国生物化学与分子生物学报,2019,35(8):907-915.
作者姓名:袁红霞  陈聪盈  王鸣刚  孙文平  王维君  张蕾  翟蒙  廖世奇
作者单位:甘肃省医学科学研究院 医学分子生物学研究中心,兰州730050;兰州理工大学 生命科学与工程学院,兰州730050
基金项目:国家自然科学基金(No.81560346);甘肃省科技计划(No.18JR3RA065和No.18JR3RA061) 和2017甘肃省卫生行业科研计划(No.GSWSKY2017-06)
摘    要:肺癌是发病率和死亡率较高的恶性肿瘤。现阶段,用于肺癌早期诊断的血清肿瘤标志物因其特异性与敏感性均较低,严重影响肺癌的临床诊断和治疗。本文用双向热循环消减指数富集的配基进化(systematic evolution of ligands by exponential enrichment, SELEX)技术,筛选肺癌和非癌血清标志物的核酸适配体,建立肺癌的检测方法,提高诊断和治疗效率。实验用环氧基琼脂磁珠为筛选介质,以非癌混合血清、肺癌混合血清作为双向靶标。应用热循环消减SELEX技术,经19轮筛选分别获得非癌和肺癌血清的特异性核酸适配体。通过高通量测序,得到 40条非癌核酸适配体序列和 41条肺癌核酸适配体序列。从肺癌与非癌血清特异性核酸适配体序列中分别挑选出高丰度的 4条序列,合成后制成检测试剂,经临床血清验证,阳性率为 90%。该检测方法检测灵敏度高,为肺癌的早期诊断和治疗提供了新的分子识别元件。

关 键 词:环氧基化琼脂磁珠    肺癌血清    指数富集的配基进化技术  核酸适配体  
收稿时间:2019-03-07

Screening of Serum Nucleic Acid Aptamers for Lung Cancer by Bidirectional Thermal Circulation
YUAN Hong-Xia,CHEN Cong-Ying,WANG Ming-Gang,SUN Wen-Ping,WANG Wei-Jun,ZHANG Lei,ZHAI Meng,LIAO Shi-Qi.Screening of Serum Nucleic Acid Aptamers for Lung Cancer by Bidirectional Thermal Circulation[J].Chinese Journal of Biochemistry and Molecular Biology,2019,35(8):907-915.
Authors:YUAN Hong-Xia  CHEN Cong-Ying  WANG Ming-Gang  SUN Wen-Ping  WANG Wei-Jun  ZHANG Lei  ZHAI Meng  LIAO Shi-Qi
Abstract:Lung cancer is a malignant tumor with high morbidity and mortality. At present, serum tumor markers used for early diagnosis of lung cancer are low in specificity and sensitivity, which seriously affect the clinical diagnosis and treatment of lung cancer. In this paper, bidirectional thermal circulation subtractive systematic evolution of ligands by exponential enrichment (SELEX) technique was used to screen aptamers for serum markers of lung cancer and non-cancer to establish a method for detection of lung cancer and to improve the efficiency of diagnosis and treatment. Epoxy agar microspheres were used as screening medium, non-cancer mixed serum and lung cancer mixed serum were used as bidirectional targets. After 15 cycles of screening, the specific aptamers of non-cancerous and lung cancer serum were obtained by the thermal circulation subtractive SELEX technique. Forty nucleic acid aptamers sequences of non cancerous and 41 nucleic acid aptamers sequences of lung cancer were obtained by high throughput sequencing. Four high abundance sequences were selected from serum specific aptamers sequences of lung cancer and non-cancerous sera. These sequences were synthesized and prepared of detection reagent. Though clinical verification experiment, the positive rate was 90%. This method has high sensitivity, which provides a new molecular recognition element for early diagnosis and treatment of lung cancer.
Keywords:
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