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TRAP及SSCP检测草鱼微卫星序列多态性
引用本文:曹哲明,张志伟,周劲松.TRAP及SSCP检测草鱼微卫星序列多态性[J].生物技术,2005,15(6):22-24.
作者姓名:曹哲明  张志伟  周劲松
作者单位:1. 南京农业大学无锡渔业学院,江苏,无锡,214081
2. 中国水产科学院淡水渔业中心,江苏,无锡,214081
3. 南京农业大学无锡渔业学院,江苏,无锡,214081;中国水产科学院淡水渔业中心,江苏,无锡,214081
基金项目:国家自然科学基金资助项目(30471343)
摘    要:目的:在草鱼不同种群遗传结构比较中,应用一些来自鲤鱼的微卫星引物扩增草鱼的相关序列缺少多态性,该研究通过应用几种方法提高这些序列在遗传学研究中的价值。方法:运用TRAP随机引物与鲤鱼的微卫星引物组合,扩增出多态性好、重复性强的产物;同时采用SSCP技术对那些没有长度多态的微卫星序列进一步分析,寻找这些序列存在一些核苷酸位点的多态性。结果:TRAP可以检查到多态性好、重复性强的产物;SSCP发现一部分没有长度多态性的微卫星序列存在核苷酸位点多态性并且可以清楚分辨不同的基因型。结论:结果表明TRAP及SSCP在种群遗传学研究有良好的应用前景。

关 键 词:TRAP  SSCP  SSR  草鱼
文章编号:1004-311X(2005)06-0022-03
收稿时间:2005-07-08
修稿时间:2005-09-23

Detection of Polymorphism in Microsatellite Sequences by TRAP and SSCP
CAO Zhe-ming,ZHANG Zhi-wei,ZHOU Jin-song.Detection of Polymorphism in Microsatellite Sequences by TRAP and SSCP[J].Biotechnology,2005,15(6):22-24.
Authors:CAO Zhe-ming  ZHANG Zhi-wei  ZHOU Jin-song
Institution:1. Freshwater Fisheries Research Center, Chinese Academy of Fishery Science, Wind 214081 ,P. R. China; 2. Wuxi Fisheries College, Nanjing Agricultural University, Wuxi 214081, P. R. China
Abstract:Objective:The primers originated from common carp are applied into population genetics of grass carp.But no polymorphism in length is detected.Some methods are applied to improve the useness of these primers.Methods:The arbitrary primers of TRAP and microsatellite primers are combined for amplification of the flank sequence of microsatellite sequences of Ctenopharyngodon idella and SSCP has also been applied for further analysis of these microsatellite sequences,Result:Relatively high polymorphism in length is detected by combination of arbitary primers from TRAP and microsatellite primers.Some changes are also found in nucleic acid sequences and different gene types can also been distinguished by SSCP.Condusion:TRAP and SSCP is a useful method in research work of population genetics.Some microsatellite sequences without polymorphism in length are also used in population genetics.
Keywords:TRAP  SSCP  SSR  Ctenophoryngodon idella
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