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A molecular phylogeny of the freshwater-fish genus Rasbora (Teleostei: Cyprinidae) in Sri Lanka reveals a remarkable diversification—And a cryptic species
Authors:Hiranya Sudasinghe  Rohan Pethiyagoda  Ranasinghe Hettiarachchige Tharindu Ranasinghe  Rajeev Raghavan  Neelesh Dahanukar  Madhava Meegaskumbura
Institution:1. Evolutionary Ecology and Systematics Lab, Department of Molecular Biology and Biotechnology, University of Peradeniya, Peradeniya, Sri Lanka

Postgraduate Institute of Science, University of Peradeniya, Peradeniya, Sri Lanka;2. Ichthyology Section, Australian Museum, Sydney, NSW, Australia;3. Butterfly Conservation Society of Sri Lanka, Malwana, Sri Lanka;4. Department of Fisheries Resource Management, Kerala University of Fisheries and Ocean Studies (KUFOS), Kochi, India;5. Indian Institute of Science Education and Research (IISER), Pune, India;6. Guangxi Key Laboratory of Forest Ecology & Conservation, College of Forestry, Guangxi University, Nanning, China

Abstract:The diversity of the freshwater-fish genus Rasbora (Cyprinidae) on Sri Lanka (five species) is high compared with the four species reported from the peninsula of India, from which the island's cyprinid fauna is derived. The paucity of characters by which species of Rasbora can be phenotypically distinguished renders field identification difficult, adversely affecting the estimation of populations and distributions, with consequences for conservation and management, increasing also the risk of taxonomic inflation. From a sampling of 90 sites across Sri Lanka and based on phylogenetic and haplotype analyses of sequences of cox1 and cytb mitochondrial, and rag1 and irbp nuclear markers, we review the species diversity and phylogeography of Rasbora on the island. Molecular analyses recover, in addition to the five species previously reported, a new (cryptic) species: Rasbora adisi sp. nov. Uncorrected pairwise cox1 genetic distances between species range from 2.0 to 12.3 percent. The Sri Lankan diversification derives from a common ancestor which arrived from India during a sea-level low-stand in the mid-Miocene (15.1 Ma 95% HPD: 11.5–19.8 Ma]), when the present-day island was subaerially connected to the Indian subcontinent by a broad isthmus. This gave rise to a clade comprising five species—R. adisi sp. nov.,Rasbora armitagei, Rasbora microcephalus, Rasbora naggsi and Rasbora wilpita—with a crown age of 9.9 Ma (95% HPD: 7.1–13.3 Ma) and to a clade comprising Indian and Sri Lankan populations of Rasbora dandia, which themselves are reciprocally monophyletic. Morphological analysis of 334 specimens discriminates between most species which, however, are most reliably diagnosed by chromatic characters. The four endemic species exhibit a pattern of inter-basin dispersal via headwater capture, followed by vicariance, explaining the high diversity of the genus on the island.
Keywords:cryptic species  diversification  freshwater fish  India  species delimitation
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