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基于线粒体12S和16S rRNA基因部分序列探讨蚱科12种的系统发育关系
引用本文:陈爱辉,蒋国芳.基于线粒体12S和16S rRNA基因部分序列探讨蚱科12种的系统发育关系[J].动物学研究,2004,25(6):510-514.
作者姓名:陈爱辉  蒋国芳
作者单位:南京师范大学,生命科学学院,江苏省生物资源技术重点实验室,江苏,南京,210097
基金项目:国家自然科学基金资助项目 (3 0 160 0 15 )~~
摘    要:用ABI377自动测序仪测定了蚱科5属11个种的12s和16S rRNA基因部分序列,并从GenBank获得1属1种的同源序列;用Clustal X1.81比较其同源性,用Mega2.1计算序列变异性和遗传距离。在获得的736bp序列中,A T含量为71.2%~77.5%,平均为73.9%;G C含量为22.5%~28.8%,平均为26.1%。经Clustal X1.81软件比对,共得到755个位点,其中简约信息位点185个。以Cylindraustralia kochii为外群,构建NJ、MP和ML分子系统树,结果表明:(1)蚱属并非一个单系群,而是一个并系群;(2)环江柯蚱Coptltettix huanjiangensis和贡山柯蚱C.gongshanensis为同一个种,即贡山柯蚱,而环江柯蚱是贡山柯蚱的同物异名。

关 键 词:蚱科  系统发育关系  G+C  蚱属  同物异名  分子系统树  rRNA基因  含量  线粒体  ML

Phylogenetic Relationships among 12 Species of Tetrigidae (Orthoptera:Tetrigoidea) Based on Partial Sequences of 12S and 16S Ribosomal RNA
Abstract.Phylogenetic Relationships among 12 Species of Tetrigidae (Orthoptera:Tetrigoidea) Based on Partial Sequences of 12S and 16S Ribosomal RNA[J].Zoological Research,2004,25(6):510-514.
Authors:Abstract
Institution:Jiangsu Key Laboratory for Bioresource Technology,College of Life Sciences,Nanjing Normal University,Nanjing 210097,China
Abstract:Mitochondrial 12S and 16S ribosomal RNA genes sequences were sequenced using dye-labeled terminator on an ABI 377 automated sequencer in 11 individuals and 1 species' sequences were gained from GenBank,representing 6 genera of family Tetrigidae.The collated sequences were aligned using Clustal X version 1.81 and then,the sequence variability and heredity distances based on Kimura 2-parameter model were calculated using Mega 2.1.In obtained sequences (736 bp),the average A T content is 73.9%,ranging from 71.2% to 77.5%;the overall G C content is 26.1%,ranging from 22.5% to 28.8%.Based on alignment of the combined sequences,185 parsimony-informative sites were revealed in 755 available base pairs.Phylogenetic trees were reconstructed using NJ,MP and ML methods with Cylindraustralia kochii as outgroup.The results indicated that the monophyletic nature of Tetrix is questioned and suggest that T.tubercarina may be given tribal rank.Our results also show that Coptltettix huanjiangensis and C.gongshanensis are the same species,i.e.Coptltettix gongshanensis Zheng,and C.huanjiangensis is the synonyms of C.gongshanensis.
Keywords:Tetrigidae  Phylogeny  12S rRNA gene  16S rRNA gene  
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