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A strategy for modelling dynamic responses in metabolic samples characterized by GC/MS
Authors:Pär Jonsson  Hans Stenlund  Thomas Moritz  Johan Trygg  Michael Sjöström  Elwin R Verheij  Johan Lindberg  Ina Schuppe-Koistinen  Henrik Antti
Institution:1. Research Group for Chemometrics, Organic Chemistry, Department of Chemistry, Ume? University, SE-901 87, Ume?, Sweden
2. Ume? Plant Science Center, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-901 87, Ume?, Sweden
3. TNO Pharma, PO Box 360, 3700 AJ, Zeist, Netherlands
4. Molecular Toxicology, Safety Assessment, AstraZeneca R&D, SE-141 85, S?dert?lje, Sweden
Abstract:A multivariate strategy for studying the metabolic response over time in urinary GC/MS data is presented and exemplified by a study of drug-induced liver toxicity in the rat. The strategy includes the generation of representative data through hierarchical multivariate curve resolution (H-MCR), highlighting the importance of obtaining resolved metabolite profiles for quantification and identification of exogenous (drug related) and endogenous compounds (potential biomarkers) and for allowing reliable comparisons of multiple samples through multivariate projections. Batch modelling was used to monitor and characterize the normal (control) metabolic variation over time as well as to map the dynamic response of the drug treated animals in relation to the control. In this way treatment related metabolic responses over time could be detected and classified as being drug related or being potential biomarkers. In summary the proposed strategy uses the relatively high sensitivity and reproducibility of GC/MS in combination with efficient multivariate curve resolution and data analysis to discover individual markers of drug metabolism and drug toxicity. The presented results imply that the strategy can be of great value in drug toxicity studies for classifying metabolic markers in relation to their dynamic responses as well as for biomarker identification.
Keywords:GC/MS  metabolomics  metabonomics  batch modelling  toxicology  hepatotoxicity  curve resolution  chemometrics
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