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Morpho-colorimetric characterization by image analysis to identify diaspores of wild plant species
Authors:Gianluigi Bacchetta  Oscar Grillo  Efisio Mattana  Gianfranco Venora  
Institution:aCentro Conservazione Biodiversità (CCB), Dipartimento di Scienze Botaniche, Università degli Studi, Cagliari, Italy;bStazione Sperimentale di Granicoltura per la Sicilia, Caltagirone Sezione di Biologia, Via Bouganvillea, 20, 95041Caltagirone, Catania, Italy
Abstract:Digital images of ex situ germplasm stored in the Sardinian Germplasm Bank (BG-SAR) were used for the application of image analysis techniques at the Stazione Sperimentale di Granicoltura per la Sicilia. The analysed accessions refer to 148 taxonomic units belonging to 102 genera and 47 families, typical of the Sardinian flora, and of the Mediterranean basin in general.The images of diaspores were acquired by a flatbed scanner and elaborated with a macro specially developed for the morphometric and colorimetric measurements. This method allowed carrying out a database for the characterization of autochthonous germplasm in entry to the bank and the realization of statistic classifiers for the discrimination of genera and species within the following families: Apiaceae, Boraginaceae, Caryophyllaceae, Cistaceae, Fabaceae and Scrophulariaceae. Such classifiers, based on the linear discriminant analysis (LDA) technique and checked by cross-validation, showed a performance included between 74.3% and 96.4%.In addition, for the genus Astragalus, it was possible to elaborate a classifier able to identify very similar taxa of a species complex, obtaining a performance between 83.7% and 100%. Such analysis proved the validity of the methodology also from the taxonomic point of view.Suggestions for subsequent methodological progress, which could offer applications in other research issues, such as ecological analysis, soil seed bank and archaeological botany are proposed.
Keywords:Mediterranean flora  Sardinia  Autochthonous germplasm  Seed bank  Statistic classification  Astragalus complex
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