孓遗植物桫椤RAPD分析中主要反应参数的影响

为得到桫椤RAPD扩增的最佳条件,对影响桫椤RAPD扩增的模板纯化方法、模板含量、酶浓度、Mg²⁺浓度、dNTP浓度和引物浓度及扩增程序等多种因素进行了探讨.结果表明,用玻璃奶和蛋白酶K纯化后获得的DNA作为模板进行RAPD反应,其扩增带比用未纯化的和仅用无水乙醇再沉淀的DNA为模板更亮,更清晰,重复性更好;模板浓度、酶浓度、Mg²⁺及dNIT浓度、引物浓度及退火温度这些因素都会对RAPD产生影响.经过本实验的探索,发现桫椤RAPD扩增的最佳体系是(2.5×10^-2mL反应体积):模板浓度为70ng,Mg²⁺浓度为2.5mmol·L^-1,dNTP为0.2mmol·L^-1,引物3×10^-4mL;最佳扩增程序为:94℃200s,一个循环;94℃60s,36℃60s,72℃120s,40个循环:72℃600s,一个循环:4℃保存.

The effects of several amplification conditions on RAPD amplification for Alsophila spinulosa

To get the optial amplification conditions for Alsophila spinulosa,the effects of the purified methods of DNA templates and the concentrations of DNA templates,Taq DNA polymerase,magesium,primer and dNTP are tested.The results suggest:the purified templates by glass milk or proteinase K are brighter,clearer and more repeatable than the unpurified templates or precipitated templates by ethanol;the concentration of DNA templates,Taq DNA polymerase,magesium,primer and dNTP will influence the productions of RAPD.The optimal amplification conditions for Alsphila spinulosa is acquired through the experiments:the concentration of DNA templates is 70ng,the concentration of magnesium is 2.5 mmol·L^-1,dNTP is 0.2 mmol·L^-1,primer is 3×10⁴ mL.The optical amplification program is also obtained:94·200s,1 cycle;94℃ 60s,36℃ 60s;72℃ 120s,40 cycle;72℃ 600s,1 cycle;stored in 4℃.