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Association analysis of ERBB2 amplicon genetic polymorphisms and STARD3 expression with risk of gastric cancer in the Chinese population
Authors:Yue Qiu  Zuo-Yang Zhang  Wei-Dong Du  Lei Ye  Song Xu  Xian-Bo Zuo  Fu-Sheng Zhou  Gang Chen  Xue-Ling Ma  Marion E Schneider  Hong-Zhen Xia  Yuan Zhou  Ji-Feng Wu  Xu Yuan-Hong  Xue-Jun Zhang
Institution:1. Department of Biology, School of Life Sciences, Anhui Medical University, Hefei 230032, China;2. Department of Pathology, Anhui Medical University, Hefei 230032, China;3. State Key Laboratory & Incubation Base of Dermatology of Ministry of National Science and Technology, Anhui Medical University, Hefei 230032, China;4. Sektion Experimentelle Anaesthesiologie, Universitaetsklinikum Ulm, Ulm 89081, Germany;5. MVZ, ACURA Kliniken, Baden-Baden 76530, Germany;6. Clinical Laboratory, the First Affiliated Hospital, Anhui Medical University, Hefei 230032, China
Abstract:The purpose of this study was to investigate whether risk of gastric cancer (GC) was associated with single nucleotide polymorphisms (SNPs) in a gene cluster on the chromosome 17q12-q21 (ERBB2 amplicon) in the Chinese Han population. We detected twenty-six SNPs in this gene cluster containing steroidogenic acute regulatory-related lipid transfer domain containing 3 (STARD3), protein phosphatase 1 regulatory subunit 1B (PPP1R1B/DARPP32), titin-cap (TCAP), per1-like domain containing 1(PERLD1/CAB2), human epidermal growth factor receptor-2 (ERBB2/HER2), zinc-finger protein subfamily 1A 3 (ZNFN1A3/IKZF3) and DNA topoisomerase 2-alpha (TOP2A) genes in 311 patients with GC and in 425 controls by Sequenom. We found no associations between genetic variations and GC risk. However, haplotype analysis implied that the haplotype CCCT of STARD3 (rs9972882, rs881844, rs11869286 and rs1877031) conferred a protective effect on the susceptibility to GC (P = 0.043, odds ratio OR] = 0.805, 95% confidence intervals 95% CI] = 0.643–0.992). The STARD3 rs1877031 TC genotype endued histogenesis of gastric mucinous adenocarcinoma and signet-ring cell carcinoma (P = 0.021, OR = 2.882, 95% CI = 1.173–7.084). We examined the expression of STARD3 in 243 tumor tissues out of the 311 GC patients and 20 adjacent normal gastric tissues using immumohistochemical (IHC) analysis and tissue microarrays (TMA). The expression of STARD3 was observed in the gastric parietal cells and in gastric tumor tissues and significantly correlated with gender (P = 0.004), alcohol drinking (P < 0.001), tumor location (P = 0.007), histological type (P = 0.005) and differentiation (P = 0.023) in GC. We concluded that the combined effect of haplotype CCCT of STARD3 might affect GC susceptibility. STARD3 expression might be related to the tumorigenesis of GC in the Chinese population.
Keywords:CI  confidence interval  EDTA  ethylenediaminetetraacetic acid  ERBB2  epidermal growth factor receptor-2  GC  gastric cancer  GRB7  growth factor receptor-bound protein 7  HapMap  International HapMap Project  HWE  Hardy&ndash  Weinberg equilibrium  IHC  immunohistochemistry  LD  linkage disequilibrium  MAF  minor allele frequency  MIEN1  migration and invasion enhancer 1  OR  odds ratio  PBS  phosphate buffer saline  PCR  polymerase chain reaction  PERLD1  per1-like domain-containing protein 1  PNMT  phenylethanolamine N-methyltransferase  PPP1R1B  protein phosphatase 1 regulatory subunit 1B  START  steroidogenic acute regulatory-related lipid transfer  STARD3  steroidogenic acute regulatory-related lipid transfer domain-containing 3  SNP  single nucleotide polymorphism  TBE  Tris/borate/EDTA  TCAP  titin-cap  TMA  tissue microarray  TOP2A  topoisomerase (DNA) II alpha  UTR  untranslated regions  ZNFN1A3  zinc-finger protein subfamily 1A3
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