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The association between Interleukin (IL)-4 gene intron 3 VNTR polymorphism and alopecia areata (AA) in Turkish population
Authors:Göknur Kalkan  Nevin Karakus  Yalçın Baş  Zennure Takçı  Pınar Özuğuz  Ömer Ateş  Serbulent Yigit
Institution:1. Gaziosmanpasa University, School of Medicine, Department of Dermatology, Tokat, Turkey;2. Gaziosmanpasa University, School of Medicine, Department of Medical Biology, Tokat, Turkey;3. Afyon Kocatepe University, School of Medicine, Department of Dermatology, Afyon, Turkey
Abstract:

Objective

Alopecia areata (AA) is hypothesized to be an organ-specific autoimmune disease of hair follicles mediated by T cells. As immunological and genetic factors have been implicated in the pathogenesis of AA, the purpose of the present study was to investigate possible associations between the functional Interleukin (IL)-4 gene intron 3 VNTR polymorphism and AA susceptibility and disease progression in Turkish population.

Methods

The study group consisted of 116 unrelated patients with AA and 125 unrelated healthy controls. Genomic DNA was isolated and IL-4 gene 70 bp VNTR polymorphism determined by using polymerase chain reaction (PCR) with specific primers.

Results

No association was observed between AA patients and controls according to genotype distribution (p = 0.051). The allele distribution of IL-4 gene intron 3 VNTR polymorphism was statistically different between AA patients and control group (p = 0.026). The frequency of P1 allele in patients was significantly higher than that in the control group. When the P2P2 genotype was compared with P1P2 + P1P1 genotypes, a statistically significant difference was observed between patients and controls (p = 0.036). Intron 3 VNTR polymorphism in the IL-4 gene was found to be associated with AA susceptibility in Turkish population.

Conclusion

The results suggest that IL-4 VNTR polymorphism in the intron 3 region may be a risk factor for the development of AA among Turkish population. This is the first to report that intron 3 VNTR polymorphism in the IL-4 gene is associated with AA susceptibility.
Keywords:AA  Alopecia areata  IL  interleukin  PCR  polymerase chain reaction  VNTR  variable number of tandem repeat  Th cells  T helper cells  TC cells  cytotoxic T cells  NK  natural killer  TNF  tumor necrosis factors alpha  AT  alopecia totalis  AU  alopecia universalis  SD  standard deviation  SPSS  Statistical Package for the Social Sciences  ANOVA  analysis of variance  OR  odds ratio  CI  confidence interval  HLA  human leukocyte antigen  SNPs  single-nucleotide polymorphisms  RA  rheumatoid arthritis  ESRD  end-stage renal disease  SLE  systemic lupus erythematosus  MS  multiple sclerosis
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