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Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134T)
Authors:Jan P. Meier-Kolthoff  Megan Lu  Marcel Huntemann  Susan Lucas  Alla Lapidus  Alex Copeland  Sam Pitluck  Lynne A. Goodwin  Cliff Han  Roxanne Tapia  Gabriele P?tter  Miriam Land  Natalia Ivanova  Manfred Rohde  Markus G?ker  John C. Detter  Tanja Woyke  Nikos C. Kyrpides  Hans-Peter Klenk
Abstract:Saccharomonospora cyanea Runmao et al. 1988 is a member of the genus Saccharomonospora in the family Pseudonocardiaceae that is moderately well characterized at the genome level thus far. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as soil, leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they probably play a role in the primary degradation of plant material by attacking hemicellulose. Species of the genus Saccharomonospora are usually Gram-positive, non-acid fast, and are classified among the actinomycetes. S. cyanea is characterized by a dark blue (= cyan blue) aerial mycelium. After S. viridis, S. azurea, and S. marina, S. cyanea is only the fourth member in the genus for which a completely sequenced (non-contiguous finished draft status) type strain genome will be published. Here we describe the features of this organism, together with the draft genome sequence, and annotation. The 5,408,301 bp long chromosome with its 5,139 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).
Keywords:draft genome   aerobic   chemoheterotrophic   Gram-positive   vegetative and aerial mycelia   spore-forming   non-motile   soil bacterium   Pseudonocardiaceae   CSP 2010
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