National Center for Biomedical Ontology: advancing biomedicine through structured organization of scientific knowledge |
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Authors: | Rubin Daniel L Lewis Suzanna E Mungall Chris J Misra Sima Westerfield Monte Ashburner Michael Sim Ida Chute Christopher G Solbrig Harold Storey Margaret-Anne Smith Barry Day-Richter John Noy Natalya F Musen Mark A |
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Affiliation: | Stanford Medical Informatics, Stanford University, Stanford, California 94305, USA. rubin@smi.stanford.edu |
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Abstract: | The National Center for Biomedical Ontology is a consortium that comprises leading informaticians, biologists, clinicians, and ontologists, funded by the National Institutes of Health (NIH) Roadmap, to develop innovative technology and methods that allow scientists to record, manage, and disseminate biomedical information and knowledge in machine-processable form. The goals of the Center are (1) to help unify the divergent and isolated efforts in ontology development by promoting high quality open-source, standards-based tools to create, manage, and use ontologies, (2) to create new software tools so that scientists can use ontologies to annotate and analyze biomedical data, (3) to provide a national resource for the ongoing evaluation, integration, and evolution of biomedical ontologies and associated tools and theories in the context of driving biomedical projects (DBPs), and (4) to disseminate the tools and resources of the Center and to identify, evaluate, and communicate best practices of ontology development to the biomedical community. Through the research activities within the Center, collaborations with the DBPs, and interactions with the biomedical community, our goal is to help scientists to work more effectively in the e-science paradigm, enhancing experiment design, experiment execution, data analysis, information synthesis, hypothesis generation and testing, and understand human disease. |
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