Verdoheme formation in Proteus mirabilis catalase |
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Authors: | Pierre Andreoletti,Jean-Marie Mouesca,Patrice Gouet,Michel Jaquinod,Chantal Capeillè re-Blandin,Hé lè ne Marie Jouve |
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Affiliation: | 1. INSERM U866, Dijon, France;2. Centre de Recherche-Biochimie Métabolique et Nutritionnelle (LBMN), Faculté des Sciences Gabriel, Université de Bourgogne, Dijon, France;3. GDR CNRS 2583, Dijon F-21000, France;4. INAC/SCIB/LRM, UMR CEA/Université Joseph Fourier E3, CEA/Grenoble, 38054, Grenoble Cedex 9, France;5. Laboratoire de Bio-Cristallographie (IBCP), 7 passage du Vercors, F-69367, Lyon, Cedex 07, France;6. Laboratoire d''Etude de la Dynamique des Protéomes (EDyP), INSERM, U880, Institut de Recherches en Technologies et Sciences pour le Vivant (iRSTV), CEA, Grenoble, 17 rue des Martyrs, F-38054, Grenoble, France;g Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS, UMR-8601, Université Paris 5, France;h IBS, Institut de Biologie Structurale Jean-Pierre Ebel, 41 rue Jules Horowitz, F-38027 Grenoble, CEA, CNRS, Université Joseph Fourier, France |
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Abstract: |
BackgroundHeme oxidative degradation has been extensively investigated in peroxidases but not in catalases. The verdoheme formation, a product of heme oxidation which inactivates the enzyme, was studied in Proteus mirabilis catalase.MethodsThe verdoheme was generated by adding peracetic acid and analyzed by mass spectrometry and spectrophotometry.ResultsKinetics follow-up of different catalase reactional intermediates shows that i) the formation of compound I always precedes that of verdoheme, ii) compound III is never observed, iii) the rate of compound II decomposition is not compatible with that of verdoheme formation, and iv) dithiothreitol prevents the verdoheme formation but not that of compound II, whereas NADPH prevents both of them. The formation of verdoheme is strongly inhibited by EDTA but not increased by Fe3+ or Cu2+ salts. The generation of verdoheme is facilitated by the presence of protein radicals as observed in the F194Y mutated catalase. The inability of the inactive variant (H54F) to form verdoheme, indicates that the heme oxidation is fully associated to the enzyme catalysis.ConclusionThese data, taken together, strongly suggest that the verdoheme formation pathway originates from compound I rather than from compound II.General significanceThe autocatalytic verdoheme formation is likely to occur in vivo. |
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Keywords: | PMC, Proteus mirabilis catalase PR, peroxide resistant Cpd, catalase compound VSC, Vibrio salmonicida catalase BLC, bovine liver catalase HEC, human erythrocyte catalase SCA, Saccharomyces cerevisiae catalase A HRP, horseradish peroxidase SOD, superoxide dismutase DTT, 1,4-dithio-dl-threitol IPTG, isopropyl-1-thio-β-d-galactopyranoside peracetic acid, peroxoacetic acid P723, pigment of PMC corresponding to an absorbance peak at 723  nm appearing when verdoheme is formed into the protein Tris&ndash HCl, tris(hydroxymethyl)aminomethane hydrochloride NADPH, β-nicotinamide adenine dinucleotide phosphate, reduced form NADP+, β-nicotinamide adenine dinucleotide phosphate, oxidized form NADPCl, monochlorinated (chlorine atom at C5 and hydroxy at C6 position) NADPH β-NMNH, β-nicotinamide mononucleotide, reduced form EDTA, ethylenediamine-tetraacetic acid rms, root mean square Rz, A406  nm/A280  nm, Reinheitszahl index SDS-PAGE, sodium dodecyl sufate-polyacrylamide gel electrophoresis |
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