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Structure and synthesis of polyisoprenoids used in N-glycosylation across the three domains of life
Authors:Meredith B. Jones  Julian N. Rosenberg  Michael J. Betenbaugh  Sharon S. Krag
Affiliation:1. Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA;2. 615 North Wolfe Street, Department of Biochemistry and Molecular Biology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USA
Abstract:N-linked protein glycosylation was originally thought to be specific to eukaryotes, but evidence of this post-translational modification has now been discovered across all domains of life: Eucarya, Bacteria, and Archaea. In all cases, the glycans are first assembled in a step-wise manner on a polyisoprenoid carrier lipid. At some stage of lipid-linked oligosaccharide synthesis, the glycan is flipped across a membrane. Subsequently, the completed glycan is transferred to specific asparagine residues on the protein of interest. Interestingly, though the N-glycosylation pathway seems to be conserved, the biosynthetic pathways of the polyisoprenoid carriers, the specific structures of the carriers, and the glycan residues added to the carriers vary widely. In this review we will elucidate how organisms in each basic domain of life synthesize the polyisoprenoids that they utilize for N-linked glycosylation and briefly discuss the subsequent modifications of the lipid to generate a lipid-linked oligosaccharide.
Keywords:LLO, lipid-linked oligosaccharide   OST, oligosaccharide transferase   IPP, isopentenyl pyrophosphate   DMAPP, dimethylallyl pyrophosphate   MVA, mevalonate   DOXP, 1-deoxy-D-xylulose-5-phosphate   HMG-CoA, 3-hydroxy-3methylglutaryl-CoA   HMGS, HMG-CoA synthase   HMGR, HMG-CoA reductase   MPPD, MVA-5-pyrophosphate decarboxylase   Dxs, DOXP synthase   IspC, DOXP reductase   MEP, 2-C-methyl-D-erythritol,4-phosphate   CTP, cytidine triphosphate   CDP-ME, 4-pyrophosphocytidyl-2-C-methyl-D-erythritol   IspD, CDP-ME synthase   IspE, 4-pyrophosphocytidyl-2C-methyl-D-erythritol kinase   CDP-MEP, CDP-ME-2-phosphate   MECPP, 2C-Methyl-D-erythritol-2,4-cyclopyrophosphate   IspF, MECPP synthase   CMP, cytidine monophosphate   HMBPP, 1-hydroxy-2-methyl-2-(E)-butenyl-4-pyrophosphate   GPP, geranyl pyrophosphate   FPP, farnesyl pyrophosphate   GGPP, geranylgeranyl pyrophosphate   FGPP, farnesylgeranyl pyrophosphate   Poly-PP, polyprenyl pyrophosphates   Poly-P, polyprenyl phosphate   Dol-P, dolichol phosphate   Dol-PP, dolichol pyrophosphate   ER, endoplasmic reticulum   UDP-GlcNAc, uridine diphosphate N-acetylglucosamine   GDP-Man, guanosine diphosphate mannose   Glc, glucose   Oligo-PP, oligoprenyl pyrophosphate   UPPS, undecaprenyl pyrophosphate synthase   Und-PP, undecaprenyl pyrophosphate   Bacillosamine, Bac, 2,4-diacetamido-2,4,6-trideoxyglucopyranose   GalNAc, N-acetylgalactosamine   IP, isopentenyl phosphate
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