Characterization of the particulate nitrite oxidase and its component activities from the chemoautotroph Nitrobacter agilis

1. Difference spectra, at room and liquid N₂ temperatures, of S₂O₄²⁻-, and NO₂⁻-reduced intact cells and cell-free preparations of Nitrobacter agilis demonstrated the presence of cytochromes of the c- and a-types. Reduction of cytochromes by succinate, and to a limited extent, by NADPH also occurred, provided KCN (0.1 mM) was also present.

2. A particulate, heat-labile nitrite oxidase having an absolute requirement for O₂ was prepared from N. agilis cells using sonic oscillation and differential centrifugation. The particles also possessed NADH oxidase, succinoxidase, formate oxidase and traces of NADPH oxidase activity. The stoichiometry of the nitrite oxidase reaction approached the theoretical value of 2 moles of NO₂⁻ consumed per mole of O₂ consumed. The pH optimum of the nitrite oxidase system shifted to progressively more alkaline values as the NO₂⁻ concentration was increased, changing from a pH value of 6.8 at 0.6 mM KNO₂ to pH 8.0 at 0.01 M KNO₂ with apparent K_m's of 0.2 and 1.2 mM NO₂⁻, respectively. Computations of the HNO₂ concentrations present under the above conditions showed an approx. 500-fold greater affinity for HNO₂ which was independent of pH, suggesting the involvement of HNO₂ as both a substrate and an inhibitor (at higher concentrations) of the nitrite oxidase system. The marked inhibition by NaN₃, NaCN and Na₂S, as well the light-reversible inhibition by CO, indicated the presence of cytochrome oxidase which was subsequently characterized. NO₂⁻ proved to be a competitive inhibitor of the nitrite oxidase system.

3. The particulate preparation also possessed a heat-labile nitrite-cytochrome c reductase activity which was energy independent and routinely measured under anaerobic conditions. As in the case of nitrite oxidase, the affinity of the enzyme for NO₃⁻ increased as the pH was lowered, but the pH optimum remained unaffected. In terms of calculated HNO₂ concentration an approximately constant K_m of about 0.2 μM was estimated at the several pH's examined. The inhibition by NO₃⁻ was shown to be competitive. The marked sensitivity of the reductase to several metal-binding agents implicated a metal component in the electron transport chain at the site prior to cytochrome c.

4. The membrane-like composition of the nitrite oxidase system is indicated.